NCLIV_031420 | putative subtilase family serine protease

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0004252      

  • Computed_GO_Functions:  serine-type endopeptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
NCLIV_031420OTHER0.9814320.0146500.003918
No Results

  • Fasta :-

    >NCLIV_031420 MMPQAQQEPRISQIKICGTISLCSLAPKLRHDASIIVPLVVEEDTIEPVHFRTLMITFHE DCDAEEVKQRALQNSLHVKLSRLSQSMDLSGQGRARDFDEPLPVTTTIVASYEAYTKKQF SVNLPSFVRGRESGAPLGRPPSRCVLSDETLHRVGIDIIKLTDCPAVEGGELKLVFERDP CVASVEFDQVVRIIGDSRDLSLGRSTTVGVPQPSSDPDATKRGRNSPNEQPYWRTIAGFE EAYDLAECLPSETVAVIDTGIAFNHPSLRKNIWKNPGEIAGNGVDDDGNGFIDDVYGFNF IDNDGDMSDDNGHGTHCAGIIGGLKDNESGAQGVCGTTTIAGLKFMGANGSGATSDAVKA INYCIQMGIRISNNSWGGPGRTDALETAILKSHKAGHIFVTAAGNAGQNNDRSPSYPASY NSPNIVAVAATDSSDEMASFSNTGARSVHVAAPGVAILSTYPPDGFKHLSGTSMASPIVA GLAALLVSLPFESHLDIKQAIMEGVDKIPATRGRVISGGRINAERSILWLAEKLGLQRRS FRKTTSRGLVHTDRSRGEALKDNEEQG
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NCLIV_031420.fa Sequence name : NCLIV_031420 Sequence length : 567 VALUES OF COMPUTED PARAMETERS Coef20 : 3.621 CoefTot : -1.073 ChDiff : -14 ZoneTo : 31 KR : 4 DE : 1 CleavSite : 32 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.876 1.935 0.321 0.708 MesoH : 0.305 0.579 -0.165 0.322 MuHd_075 : 18.039 15.711 5.789 4.478 MuHd_095 : 17.171 13.694 5.507 3.957 MuHd_100 : 12.430 6.677 3.867 2.636 MuHd_105 : 11.345 9.422 5.029 2.829 Hmax_075 : 14.900 14.700 4.400 4.223 Hmax_095 : 15.100 17.200 4.687 5.290 Hmax_100 : 7.800 14.100 -0.064 4.600 Hmax_105 : 7.500 11.800 3.837 2.510 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8961 0.1039 DFMC : 0.9129 0.0871
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 567 NCLIV_031420 MMPQAQQEPRISQIKICGTISLCSLAPKLRHDASIIVPLVVEEDTIEPVHFRTLMITFHEDCDAEEVKQRALQNSLHVKL 80 SRLSQSMDLSGQGRARDFDEPLPVTTTIVASYEAYTKKQFSVNLPSFVRGRESGAPLGRPPSRCVLSDETLHRVGIDIIK 160 LTDCPAVEGGELKLVFERDPCVASVEFDQVVRIIGDSRDLSLGRSTTVGVPQPSSDPDATKRGRNSPNEQPYWRTIAGFE 240 EAYDLAECLPSETVAVIDTGIAFNHPSLRKNIWKNPGEIAGNGVDDDGNGFIDDVYGFNFIDNDGDMSDDNGHGTHCAGI 320 IGGLKDNESGAQGVCGTTTIAGLKFMGANGSGATSDAVKAINYCIQMGIRISNNSWGGPGRTDALETAILKSHKAGHIFV 400 TAAGNAGQNNDRSPSYPASYNSPNIVAVAATDSSDEMASFSNTGARSVHVAAPGVAILSTYPPDGFKHLSGTSMASPIVA 480 GLAALLVSLPFESHLDIKQAIMEGVDKIPATRGRVISGGRINAERSILWLAEKLGLQRRSFRKTTSRGLVHTDRSRGEAL 560 KDNEEQG 640 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ....... 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NCLIV_031420 10 QAQQEPR|IS 0.111 . NCLIV_031420 15 PRISQIK|IC 0.075 . NCLIV_031420 28 LCSLAPK|LR 0.067 . NCLIV_031420 30 SLAPKLR|HD 0.093 . NCLIV_031420 52 IEPVHFR|TL 0.098 . NCLIV_031420 68 CDAEEVK|QR 0.060 . NCLIV_031420 70 AEEVKQR|AL 0.125 . NCLIV_031420 79 QNSLHVK|LS 0.073 . NCLIV_031420 82 LHVKLSR|LS 0.077 . NCLIV_031420 94 DLSGQGR|AR 0.109 . NCLIV_031420 96 SGQGRAR|DF 0.160 . NCLIV_031420 117 SYEAYTK|KQ 0.056 . NCLIV_031420 118 YEAYTKK|QF 0.155 . NCLIV_031420 129 NLPSFVR|GR 0.083 . NCLIV_031420 131 PSFVRGR|ES 0.114 . NCLIV_031420 139 SGAPLGR|PP 0.090 . NCLIV_031420 143 LGRPPSR|CV 0.130 . NCLIV_031420 153 SDETLHR|VG 0.091 . NCLIV_031420 160 VGIDIIK|LT 0.056 . NCLIV_031420 173 VEGGELK|LV 0.070 . NCLIV_031420 178 LKLVFER|DP 0.093 . NCLIV_031420 192 EFDQVVR|II 0.107 . NCLIV_031420 198 RIIGDSR|DL 0.126 . NCLIV_031420 204 RDLSLGR|ST 0.145 . NCLIV_031420 221 SDPDATK|RG 0.061 . NCLIV_031420 222 DPDATKR|GR 0.136 . NCLIV_031420 224 DATKRGR|NS 0.080 . NCLIV_031420 234 NEQPYWR|TI 0.103 . NCLIV_031420 269 FNHPSLR|KN 0.105 . NCLIV_031420 270 NHPSLRK|NI 0.080 . NCLIV_031420 274 LRKNIWK|NP 0.083 . NCLIV_031420 325 GIIGGLK|DN 0.068 . NCLIV_031420 344 TTIAGLK|FM 0.075 . NCLIV_031420 359 ATSDAVK|AI 0.084 . NCLIV_031420 370 CIQMGIR|IS 0.079 . NCLIV_031420 381 SWGGPGR|TD 0.080 . NCLIV_031420 391 LETAILK|SH 0.064 . NCLIV_031420 394 AILKSHK|AG 0.065 . NCLIV_031420 412 AGQNNDR|SP 0.093 . NCLIV_031420 446 FSNTGAR|SV 0.339 . NCLIV_031420 467 YPPDGFK|HL 0.062 . NCLIV_031420 498 ESHLDIK|QA 0.077 . NCLIV_031420 507 IMEGVDK|IP 0.060 . NCLIV_031420 512 DKIPATR|GR 0.079 . NCLIV_031420 514 IPATRGR|VI 0.171 . NCLIV_031420 520 RVISGGR|IN 0.064 . NCLIV_031420 525 GRINAER|SI 0.125 . NCLIV_031420 533 ILWLAEK|LG 0.053 . NCLIV_031420 538 EKLGLQR|RS 0.070 . NCLIV_031420 539 KLGLQRR|SF 0.268 . NCLIV_031420 542 LQRRSFR|KT 0.267 . NCLIV_031420 543 QRRSFRK|TT 0.155 . NCLIV_031420 547 FRKTTSR|GL 0.099 . NCLIV_031420 554 GLVHTDR|SR 0.172 . NCLIV_031420 556 VHTDRSR|GE 0.069 . NCLIV_031420 561 SRGEALK|DN 0.093 . ____________________________^_________________

  • Fasta :-

    >NCLIV_031420 ATGATGCCACAAGCTCAGCAAGAGCCTCGAATATCTCAGATAAAGATCTGTGGGACGATC TCCCTCTGTTCTCTAGCCCCCAAGCTGCGTCACGATGCGTCAATTATCGTTCCTTTGGTT GTGGAAGAAGATACTATCGAGCCTGTCCACTTCCGCACGTTGATGATTACCTTCCATGAA GACTGTGACGCAGAGGAAGTGAAACAGAGGGCTCTCCAAAATAGCTTGCACGTCAAGCTC TCACGCTTGTCACAGTCCATGGATCTCAGCGGACAGGGGAGAGCCCGCGACTTTGACGAG CCGCTGCCCGTCACTACGACTATTGTTGCTTCGTATGAGGCATACACAAAGAAACAATTC AGTGTGAATTTGCCTTCCTTTGTCCGGGGTAGAGAATCAGGGGCGCCTCTGGGGCGTCCC CCATCAAGGTGCGTGCTGAGCGATGAGACCTTGCACAGAGTGGGAATCGATATCATTAAA CTCACGGACTGTCCTGCCGTTGAAGGAGGAGAGCTAAAATTAGTGTTTGAAAGGGACCCG TGCGTGGCTTCTGTTGAGTTCGACCAAGTTGTCAGAATAATTGGTGACTCGAGAGATCTT TCCTTGGGTCGGTCAACCACTGTCGGGGTGCCTCAACCAAGCTCGGATCCAGATGCAACG AAGAGAGGCCGGAATAGCCCTAATGAACAACCATACTGGCGAACAATTGCGGGGTTTGAA GAGGCATACGATTTGGCTGAGTGCCTTCCAAGCGAGACTGTCGCAGTCATAGATACTGGG ATCGCGTTCAATCACCCCTCACTCCGGAAGAACATATGGAAAAACCCAGGAGAGATCGCC GGAAATGGGGTTGACGATGATGGAAACGGCTTTATTGACGACGTTTACGGCTTTAACTTC ATCGATAACGATGGAGACATGTCAGACGACAACGGTCATGGTACCCACTGCGCCGGTATC ATCGGTGGCTTGAAAGACAACGAATCAGGTGCTCAGGGAGTCTGTGGTACCACCACCATT GCCGGATTGAAGTTTATGGGAGCCAACGGCAGCGGTGCGACGTCTGACGCTGTGAAAGCC ATTAATTATTGCATACAAATGGGAATTCGAATCAGCAACAACAGCTGGGGGGGCCCTGGA CGAACAGATGCTTTAGAAACCGCCATCTTAAAATCTCATAAAGCAGGTCATATCTTTGTC ACTGCTGCCGGAAATGCTGGACAAAACAACGATCGATCGCCTTCCTACCCCGCCTCATAC AATTCGCCAAACATTGTGGCGGTCGCCGCAACAGATTCGTCCGATGAAATGGCTTCGTTC AGCAACACAGGCGCTCGATCTGTACATGTGGCTGCCCCAGGTGTGGCGATCCTGTCAACG TATCCTCCTGACGGCTTCAAGCACCTCTCAGGAACGTCTATGGCGTCTCCCATTGTAGCC GGTCTGGCAGCTTTGCTGGTGTCGCTGCCCTTTGAGAGCCACCTGGATATCAAGCAAGCC ATTATGGAAGGAGTGGACAAGATCCCAGCGACCCGCGGCAGGGTAATCTCTGGGGGGCGC ATCAACGCCGAGCGTTCTATCCTGTGGCTCGCAGAGAAGTTAGGACTGCAACGGCGTTCG TTCAGAAAAACAACGTCTCGCGGTCTGGTGCACACAGATCGTAGCAGGGGCGAGGCCCTT AAGGACAACGAGGAACAAGGCTGA
  • Download Fasta

  • Fasta :-

    MMPQAQQEPRISQIKICGTISLCSLAPKLRHDASIIVPLVVEEDTIEPVHFRTLMITFHE DCDAEEVKQRALQNSLHVKLSRLSQSMDLSGQGRARDFDEPLPVTTTIVASYEAYTKKQF SVNLPSFVRGRESGAPLGRPPSRCVLSDETLHRVGIDIIKLTDCPAVEGGELKLVFERDP CVASVEFDQVVRIIGDSRDLSLGRSTTVGVPQPSSDPDATKRGRNSPNEQPYWRTIAGFE EAYDLAECLPSETVAVIDTGIAFNHPSLRKNIWKNPGEIAGNGVDDDGNGFIDDVYGFNF IDNDGDMSDDNGHGTHCAGIIGGLKDNESGAQGVCGTTTIAGLKFMGANGSGATSDAVKA INYCIQMGIRISNNSWGGPGRTDALETAILKSHKAGHIFVTAAGNAGQNNDRSPSYPASY NSPNIVAVAATDSSDEMASFSNTGARSVHVAAPGVAILSTYPPDGFKHLSGTSMASPIVA GLAALLVSLPFESHLDIKQAIMEGVDKIPATRGRVISGGRINAERSILWLAEKLGLQRRS FRKTTSRGLVHTDRSRGEALKDNEEQG

  • title: catalytic triad
  • coordinates: D258,H313,S473
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
NCLIV_031420226 SRGRNSPNEQ0.998unspNCLIV_031420226 SRGRNSPNEQ0.998unspNCLIV_031420226 SRGRNSPNEQ0.998unspNCLIV_031420540 SLQRRSFRKT0.992unspNCLIV_03142084 SLSRLSQSMD0.994unspNCLIV_031420201 SSRDLSLGRS0.995unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India