NCLIV_031500 | hypothetical protein

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
NCLIV_031500OTHER0.9922590.0036940.004046
No Results

  • Fasta :-

    >NCLIV_031500 MAQISPCRAGPRAPAEKTSGECSGRLPGRVWQSSLGREKRRADSWAYGGFPSLSHRQAAA LYPPLLLGITLLFAAYGVSPFVQATPIADFEAFPLLQYETSASNTPGSPKAAPVLLGAWG SSALNSALAVATIVADQVGSAGERGATEPQQQTGGEGATGVASGVLDDDGAASLLQQPMI QEQLRGLAKKNIYIFRATEVPVVLVDALLDRAQNVLLLLPPRGEEETDGDSDALSLASED RPGKRENGEGEGNASRRPHMPALREAARVRSLEQRLISRFSAGACLFAFETPQLAALYEE LRDHQTRLLASPGSLPASSLLPAFLHRGLAPTLSIQRAPLPASHFAAGLRDSIRLSAPFE GRNMFAWLPGRRPQEDGPAPAVAIVAHYDAFAAAPHLALGAEGNGSGVAALIELARLFSR LYTGADQDGSPTSANGGASPIEPGNYSLLFLLADAGGADFAGAAQWLAKTDPRVLESISY VLCLDDIAASPQLYLHTAKKYKEPRVRKLLQNLEKAFVQAGLSLSLEPRKIVVRTPPKPF WVHEHFTMKKVIAGTLSSKPHATGLWARSSILDQSSSAQSRANLLRVVGAIAEGLAHFVY EVEDSSVKIMDGLNRPLAPFLHAWLGRASRSPRFYAFRQTDQNVARKNHTQAPSAAFADA LHAALDKLAPPAQSQTFSLPASGTVFTYEPPMFLSVVETRPAIFDILCLLAAVAYCFTIY YSIVGWQLVLPAISNLTSSGTAFFLDCLVPLLCFFPSISIQVFSS
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NCLIV_031500.fa Sequence name : NCLIV_031500 Sequence length : 765 VALUES OF COMPUTED PARAMETERS Coef20 : 3.699 CoefTot : -0.218 ChDiff : 0 ZoneTo : 15 KR : 2 DE : 0 CleavSite : 14 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.953 2.329 0.477 0.750 MesoH : 1.145 1.393 0.167 0.544 MuHd_075 : 37.164 13.499 8.249 7.555 MuHd_095 : 22.404 1.146 5.132 3.732 MuHd_100 : 15.156 4.165 4.245 2.548 MuHd_105 : 12.432 5.108 3.541 2.363 Hmax_075 : 9.333 6.183 1.278 3.570 Hmax_095 : 3.400 1.400 0.245 1.650 Hmax_100 : 3.400 3.900 0.245 1.650 Hmax_105 : 0.500 2.012 -0.485 1.020 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8898 0.1102 DFMC : 0.8036 0.1964
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 765 NCLIV_031500 MAQISPCRAGPRAPAEKTSGECSGRLPGRVWQSSLGREKRRADSWAYGGFPSLSHRQAAALYPPLLLGITLLFAAYGVSP 80 FVQATPIADFEAFPLLQYETSASNTPGSPKAAPVLLGAWGSSALNSALAVATIVADQVGSAGERGATEPQQQTGGEGATG 160 VASGVLDDDGAASLLQQPMIQEQLRGLAKKNIYIFRATEVPVVLVDALLDRAQNVLLLLPPRGEEETDGDSDALSLASED 240 RPGKRENGEGEGNASRRPHMPALREAARVRSLEQRLISRFSAGACLFAFETPQLAALYEELRDHQTRLLASPGSLPASSL 320 LPAFLHRGLAPTLSIQRAPLPASHFAAGLRDSIRLSAPFEGRNMFAWLPGRRPQEDGPAPAVAIVAHYDAFAAAPHLALG 400 AEGNGSGVAALIELARLFSRLYTGADQDGSPTSANGGASPIEPGNYSLLFLLADAGGADFAGAAQWLAKTDPRVLESISY 480 VLCLDDIAASPQLYLHTAKKYKEPRVRKLLQNLEKAFVQAGLSLSLEPRKIVVRTPPKPFWVHEHFTMKKVIAGTLSSKP 560 HATGLWARSSILDQSSSAQSRANLLRVVGAIAEGLAHFVYEVEDSSVKIMDGLNRPLAPFLHAWLGRASRSPRFYAFRQT 640 DQNVARKNHTQAPSAAFADALHAALDKLAPPAQSQTFSLPASGTVFTYEPPMFLSVVETRPAIFDILCLLAAVAYCFTIY 720 YSIVGWQLVLPAISNLTSSGTAFFLDCLVPLLCFFPSISIQVFSS 800 .......................................P........................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ............................................. 800 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ NCLIV_031500 8 AQISPCR|AG 0.075 . NCLIV_031500 12 PCRAGPR|AP 0.092 . NCLIV_031500 17 PRAPAEK|TS 0.072 . NCLIV_031500 25 SGECSGR|LP 0.097 . NCLIV_031500 29 SGRLPGR|VW 0.105 . NCLIV_031500 37 WQSSLGR|EK 0.095 . NCLIV_031500 39 SSLGREK|RR 0.056 . NCLIV_031500 40 SLGREKR|RA 0.663 *ProP* NCLIV_031500 41 LGREKRR|AD 0.246 . NCLIV_031500 56 FPSLSHR|QA 0.135 . NCLIV_031500 110 NTPGSPK|AA 0.072 . NCLIV_031500 144 VGSAGER|GA 0.115 . NCLIV_031500 185 MIQEQLR|GL 0.105 . NCLIV_031500 189 QLRGLAK|KN 0.070 . NCLIV_031500 190 LRGLAKK|NI 0.153 . NCLIV_031500 196 KNIYIFR|AT 0.108 . NCLIV_031500 211 VDALLDR|AQ 0.077 . NCLIV_031500 222 LLLLPPR|GE 0.082 . NCLIV_031500 241 SLASEDR|PG 0.085 . NCLIV_031500 244 SEDRPGK|RE 0.101 . NCLIV_031500 245 EDRPGKR|EN 0.290 . NCLIV_031500 256 GEGNASR|RP 0.064 . NCLIV_031500 257 EGNASRR|PH 0.201 . NCLIV_031500 264 PHMPALR|EA 0.090 . NCLIV_031500 268 ALREAAR|VR 0.090 . NCLIV_031500 270 REAARVR|SL 0.202 . NCLIV_031500 275 VRSLEQR|LI 0.116 . NCLIV_031500 279 EQRLISR|FS 0.081 . NCLIV_031500 302 ALYEELR|DH 0.085 . NCLIV_031500 307 LRDHQTR|LL 0.093 . NCLIV_031500 327 LPAFLHR|GL 0.119 . NCLIV_031500 337 PTLSIQR|AP 0.062 . NCLIV_031500 350 HFAAGLR|DS 0.081 . NCLIV_031500 354 GLRDSIR|LS 0.096 . NCLIV_031500 362 SAPFEGR|NM 0.104 . NCLIV_031500 371 FAWLPGR|RP 0.072 . NCLIV_031500 372 AWLPGRR|PQ 0.116 . NCLIV_031500 416 ALIELAR|LF 0.089 . NCLIV_031500 420 LARLFSR|LY 0.091 . NCLIV_031500 469 AAQWLAK|TD 0.072 . NCLIV_031500 473 LAKTDPR|VL 0.087 . NCLIV_031500 499 LYLHTAK|KY 0.057 . NCLIV_031500 500 YLHTAKK|YK 0.123 . NCLIV_031500 502 HTAKKYK|EP 0.066 . NCLIV_031500 505 KKYKEPR|VR 0.080 . NCLIV_031500 507 YKEPRVR|KL 0.092 . NCLIV_031500 508 KEPRVRK|LL 0.219 . NCLIV_031500 515 LLQNLEK|AF 0.072 . NCLIV_031500 529 SLSLEPR|KI 0.095 . NCLIV_031500 530 LSLEPRK|IV 0.083 . NCLIV_031500 534 PRKIVVR|TP 0.078 . NCLIV_031500 538 VVRTPPK|PF 0.069 . NCLIV_031500 549 HEHFTMK|KV 0.100 . NCLIV_031500 550 EHFTMKK|VI 0.093 . NCLIV_031500 559 AGTLSSK|PH 0.062 . NCLIV_031500 568 ATGLWAR|SS 0.128 . NCLIV_031500 581 SSSAQSR|AN 0.096 . NCLIV_031500 586 SRANLLR|VV 0.219 . NCLIV_031500 608 VEDSSVK|IM 0.054 . NCLIV_031500 615 IMDGLNR|PL 0.100 . NCLIV_031500 627 LHAWLGR|AS 0.096 . NCLIV_031500 630 WLGRASR|SP 0.283 . NCLIV_031500 633 RASRSPR|FY 0.422 . NCLIV_031500 638 PRFYAFR|QT 0.131 . NCLIV_031500 646 TDQNVAR|KN 0.172 . NCLIV_031500 647 DQNVARK|NH 0.093 . NCLIV_031500 667 LHAALDK|LA 0.072 . NCLIV_031500 700 LSVVETR|PA 0.097 . ____________________________^_________________

  • Fasta :-

    >NCLIV_031500 ATGGCGCAAATCTCTCCCTGTCGAGCTGGGCCTCGCGCTCCTGCAGAGAAGACGTCTGGG GAGTGCAGCGGAAGACTGCCAGGTCGAGTGTGGCAGTCCTCACTGGGACGAGAGAAGAGA CGTGCGGACAGTTGGGCGTATGGAGGCTTCCCCTCTCTCTCACACCGCCAGGCTGCCGCC TTGTATCCTCCGCTGCTTCTCGGAATCACCCTCCTCTTCGCCGCTTATGGCGTCTCGCCC TTCGTCCAGGCAACGCCCATCGCCGACTTTGAAGCGTTTCCCCTCCTTCAGTACGAAACG TCCGCCTCCAACACTCCAGGCAGCCCGAAAGCTGCGCCTGTCCTCCTCGGGGCTTGGGGC TCCTCGGCTCTGAACAGCGCCTTGGCGGTGGCGACGATTGTGGCCGATCAAGTGGGCTCC GCAGGCGAGCGTGGGGCGACTGAACCGCAGCAGCAAACGGGCGGAGAGGGAGCGACTGGA GTGGCCTCTGGGGTGCTCGACGACGATGGCGCCGCCTCGCTGCTCCAGCAGCCGATGATT CAAGAGCAACTGCGCGGCCTGGCGAAGAAGAACATCTACATCTTTCGCGCGACGGAAGTG CCCGTCGTTCTTGTGGACGCGCTCCTGGATCGGGCTCAAAACGTCCTCCTGCTGTTGCCC CCTCGAGGAGAGGAAGAGACAGACGGCGACTCGGACGCGCTCTCTCTCGCCTCTGAAGAC AGGCCGGGAAAACGCGAGAACGGAGAAGGCGAAGGAAACGCTTCCCGCCGACCCCACATG CCCGCCTTGCGCGAAGCAGCTCGTGTGCGGTCTCTGGAGCAGCGCCTGATTTCGAGGTTC TCCGCTGGTGCATGCCTCTTTGCCTTTGAAACGCCGCAACTGGCGGCTCTGTACGAAGAG CTCCGGGACCACCAAACGCGCCTTCTCGCATCTCCCGGTTCTCTGCCCGCGTCGTCCCTT CTGCCGGCCTTTCTTCACAGAGGCCTCGCCCCAACACTCTCCATTCAGCGCGCCCCGCTG CCTGCCTCGCACTTCGCCGCGGGCCTCCGGGACTCGATCCGCCTCAGTGCTCCTTTCGAA GGACGGAATATGTTTGCTTGGCTTCCTGGCCGCCGGCCTCAGGAGGACGGACCGGCCCCC GCCGTCGCCATCGTTGCTCATTACGACGCGTTTGCTGCTGCTCCGCATCTGGCGTTGGGC GCGGAAGGAAACGGCAGCGGAGTTGCAGCGCTCATCGAACTTGCGCGACTCTTCTCGCGG CTGTACACGGGTGCGGATCAAGACGGCTCGCCGACTTCAGCGAATGGAGGCGCTTCGCCC ATTGAGCCGGGGAACTATTCGCTGCTCTTTCTTCTGGCCGACGCAGGCGGCGCAGATTTT GCTGGAGCTGCTCAGTGGCTGGCGAAGACAGATCCGAGGGTTTTGGAGTCGATCAGCTAT GTGCTTTGCCTCGACGACATCGCCGCGTCCCCCCAGCTGTACCTCCACACGGCGAAAAAG TACAAGGAACCGCGTGTGCGGAAACTTCTGCAGAACCTCGAGAAGGCCTTCGTGCAGGCC GGCCTCTCTCTGAGCCTGGAGCCGAGGAAGATCGTCGTGCGAACGCCTCCCAAGCCTTTC TGGGTCCACGAGCACTTCACCATGAAGAAGGTGATCGCAGGAACATTGTCGTCGAAGCCA CACGCCACTGGCCTATGGGCACGGAGCTCGATTCTTGATCAATCTTCCTCGGCGCAGTCG CGGGCGAATCTTTTGCGGGTCGTGGGGGCTATCGCAGAAGGCCTTGCCCACTTTGTGTAC GAAGTGGAGGATTCCTCGGTGAAAATCATGGACGGACTGAATCGTCCTCTCGCGCCCTTC CTCCACGCTTGGCTTGGTCGCGCGTCTCGCTCGCCTCGATTCTATGCCTTCCGTCAGACG GACCAGAATGTAGCCAGAAAGAACCACACACAAGCACCCAGTGCGGCGTTCGCTGACGCG CTGCACGCTGCGCTCGACAAACTCGCGCCTCCGGCCCAATCGCAAACGTTCTCTCTTCCC GCTTCGGGGACTGTCTTCACCTACGAGCCGCCGATGTTTTTGAGTGTCGTCGAAACCCGG CCTGCTATCTTCGATATCCTCTGCCTTCTCGCTGCCGTCGCCTACTGCTTCACGATCTAT TACTCAATTGTTGGCTGGCAGCTTGTTCTCCCTGCAATCAGCAACTTGACCTCTTCAGGT ACGGCTTTCTTCCTTGACTGTCTCGTGCCTCTTCTTTGCTTTTTCCCGTCCATTTCGATC CAGGTCTTCTCTAGCTAA
  • Download Fasta

  • Fasta :-

    MAQISPCRAGPRAPAEKTSGECSGRLPGRVWQSSLGREKRRADSWAYGGFPSLSHRQAAA LYPPLLLGITLLFAAYGVSPFVQATPIADFEAFPLLQYETSASNTPGSPKAAPVLLGAWG SSALNSALAVATIVADQVGSAGERGATEPQQQTGGEGATGVASGVLDDDGAASLLQQPMI QEQLRGLAKKNIYIFRATEVPVVLVDALLDRAQNVLLLLPPRGEEETDGDSDALSLASED RPGKRENGEGEGNASRRPHMPALREAARVRSLEQRLISRFSAGACLFAFETPQLAALYEE LRDHQTRLLASPGSLPASSLLPAFLHRGLAPTLSIQRAPLPASHFAAGLRDSIRLSAPFE GRNMFAWLPGRRPQEDGPAPAVAIVAHYDAFAAAPHLALGAEGNGSGVAALIELARLFSR LYTGADQDGSPTSANGGASPIEPGNYSLLFLLADAGGADFAGAAQWLAKTDPRVLESISY VLCLDDIAASPQLYLHTAKKYKEPRVRKLLQNLEKAFVQAGLSLSLEPRKIVVRTPPKPF WVHEHFTMKKVIAGTLSSKPHATGLWARSSILDQSSSAQSRANLLRVVGAIAEGLAHFVY EVEDSSVKIMDGLNRPLAPFLHAWLGRASRSPRFYAFRQTDQNVARKNHTQAPSAAFADA LHAALDKLAPPAQSQTFSLPASGTVFTYEPPMFLSVVETRPAIFDILCLLAAVAYCFTIY YSIVGWQLVLPAISNLTSSGTAFFLDCLVPLLCFFPSISIQVFSS

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
NCLIV_031500108 SNTPGSPKAA0.997unspNCLIV_031500439 SNGGASPIEP0.994unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India