NCLIV_032060 | putative peptidase family T4

UniProt_ID: F0VI58

Computed_GO_Component_IDs:
Computed_GO_Components:
Computed_GO_Function_IDs:
Computed_GO_Functions:
Computed_GO_Process_IDs:
Computed_GO_Processes:
Curated_GO_Component_IDs:
Curated_GO_Components:
Curated_GO_Function_IDs:
Curated_GO_Functions:
Curated_GO_Processes:

	_ID	Prediction	OTHER	SP	mTP	CS_Position
	NCLIV_032060	OTHER	0.950100	0.029811	0.020090

No Results

Fasta :-
>NCLIV_032060 MWTGSGVSFLCHVEKPALAESQCRAASLSQESREDQPKREQECGEKAKENERFVTGASFF AFDRPLAAVGRLFGSAPATRDFGAVQIGNSVQCIHGILFGGGSVFGLDAVGGLLEFQRQR GIGVSTIAGPIPVCPALGIFDVPALPPGPSSSETRAFALPQFVTSADVSTACAEAVRVQA SVPASLPRSDREGDKHREAVEKEGTPALADSPLRVRCRLGSNGTVSTAFSHAWTRLSLRK DADRTPAASTSPGQSTASSGASGSPSLEETASWIGSIGVGVGATCARVGECAGFAPRKGG WGEACRQRPWRGERREGKAGDTERGSAAEAGLETLKVQAFIVVNSYGDIVAAGKGSEGSV VAGPLKDGVTYAAADLLQEAGIHVSLNRDALWRVAAMAGAGMARAIHPIFSPVDGDAVIA VSTGELTHGDTDPTLSEIIVGTMAAECVAEAIQQAAAASNNL
Download Fasta

MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NCLIV_032060.fa Sequence name : NCLIV_032060 Sequence length : 462 VALUES OF COMPUTED PARAMETERS Coef20 : 3.656 CoefTot : -0.393 ChDiff : -8 ZoneTo : 13 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.729 1.618 0.383 0.689 MesoH : 0.349 0.780 -0.050 0.401 MuHd_075 : 11.789 5.741 1.927 2.388 MuHd_095 : 15.079 11.563 2.476 4.608 MuHd_100 : 12.755 12.164 3.925 4.075 MuHd_105 : 10.980 13.528 5.343 3.533 Hmax_075 : 13.500 10.700 1.996 4.270 Hmax_095 : 15.400 10.850 1.172 5.049 Hmax_100 : 14.800 11.900 1.515 5.430 Hmax_105 : 13.767 15.050 2.811 5.075 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8912 0.1088 DFMC : 0.9077 0.0923

##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 462 NCLIV_032060 MWTGSGVSFLCHVEKPALAESQCRAASLSQESREDQPKREQECGEKAKENERFVTGASFFAFDRPLAAVGRLFGSAPATR 80 DFGAVQIGNSVQCIHGILFGGGSVFGLDAVGGLLEFQRQRGIGVSTIAGPIPVCPALGIFDVPALPPGPSSSETRAFALP 160 QFVTSADVSTACAEAVRVQASVPASLPRSDREGDKHREAVEKEGTPALADSPLRVRCRLGSNGTVSTAFSHAWTRLSLRK 240 DADRTPAASTSPGQSTASSGASGSPSLEETASWIGSIGVGVGATCARVGECAGFAPRKGGWGEACRQRPWRGERREGKAG 320 DTERGSAAEAGLETLKVQAFIVVNSYGDIVAAGKGSEGSVVAGPLKDGVTYAAADLLQEAGIHVSLNRDALWRVAAMAGA 400 GMARAIHPIFSPVDGDAVIAVSTGELTHGDTDPTLSEIIVGTMAAECVAEAIQQAAAASNNL 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 .............................................................. 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NCLIV_032060 15 FLCHVEK|PA 0.069 . NCLIV_032060 24 LAESQCR|AA 0.124 . NCLIV_032060 33 SLSQESR|ED 0.119 . NCLIV_032060 38 SREDQPK|RE 0.068 . NCLIV_032060 39 REDQPKR|EQ 0.291 . NCLIV_032060 46 EQECGEK|AK 0.060 . NCLIV_032060 48 ECGEKAK|EN 0.077 . NCLIV_032060 52 KAKENER|FV 0.119 . NCLIV_032060 64 SFFAFDR|PL 0.098 . NCLIV_032060 71 PLAAVGR|LF 0.112 . NCLIV_032060 80 GSAPATR|DF 0.196 . NCLIV_032060 118 GLLEFQR|QR 0.115 . NCLIV_032060 120 LEFQRQR|GI 0.120 . NCLIV_032060 155 PSSSETR|AF 0.104 . NCLIV_032060 177 ACAEAVR|VQ 0.073 . NCLIV_032060 188 VPASLPR|SD 0.174 . NCLIV_032060 191 SLPRSDR|EG 0.347 . NCLIV_032060 195 SDREGDK|HR 0.077 . NCLIV_032060 197 REGDKHR|EA 0.158 . NCLIV_032060 202 HREAVEK|EG 0.081 . NCLIV_032060 214 LADSPLR|VR 0.069 . NCLIV_032060 216 DSPLRVR|CR 0.069 . NCLIV_032060 218 PLRVRCR|LG 0.105 . NCLIV_032060 235 FSHAWTR|LS 0.077 . NCLIV_032060 239 WTRLSLR|KD 0.080 . NCLIV_032060 240 TRLSLRK|DA 0.142 . NCLIV_032060 244 LRKDADR|TP 0.084 . NCLIV_032060 287 VGATCAR|VG 0.095 . NCLIV_032060 297 CAGFAPR|KG 0.112 . NCLIV_032060 298 AGFAPRK|GG 0.082 . NCLIV_032060 306 GWGEACR|QR 0.071 . NCLIV_032060 308 GEACRQR|PW 0.120 . NCLIV_032060 311 CRQRPWR|GE 0.422 . NCLIV_032060 314 RPWRGER|RE 0.360 . NCLIV_032060 315 PWRGERR|EG 0.138 . NCLIV_032060 318 GERREGK|AG 0.228 . NCLIV_032060 324 KAGDTER|GS 0.102 . NCLIV_032060 336 AGLETLK|VQ 0.053 . NCLIV_032060 354 DIVAAGK|GS 0.067 . NCLIV_032060 366 VVAGPLK|DG 0.059 . NCLIV_032060 388 IHVSLNR|DA 0.108 . NCLIV_032060 393 NRDALWR|VA 0.110 . NCLIV_032060 404 AGAGMAR|AI 0.144 . ____________________________^_________________

Fasta :-
>NCLIV_032060 ATGTGGACGGGCAGCGGCGTGTCCTTTTTGTGCCACGTGGAAAAGCCTGCGTTGGCGGAA TCGCAGTGCAGAGCTGCTTCTCTCTCCCAAGAAAGCAGAGAAGACCAGCCCAAGCGGGAA CAAGAATGTGGAGAAAAGGCGAAGGAGAACGAAAGATTTGTCACCGGCGCCTCGTTCTTC GCCTTTGACCGACCCCTTGCTGCAGTCGGCCGCCTCTTTGGATCCGCGCCGGCCACGCGA GATTTCGGAGCTGTTCAGATAGGCAACTCTGTCCAGTGCATCCACGGCATTCTCTTCGGT GGCGGGAGCGTCTTCGGCCTAGATGCAGTCGGAGGGTTGCTTGAATTCCAGCGCCAGCGC GGCATTGGCGTCTCGACAATTGCGGGACCGATTCCCGTCTGCCCGGCCCTAGGCATTTTC GACGTTCCCGCGCTCCCGCCTGGCCCCTCTTCATCGGAGACTCGTGCGTTTGCTCTCCCC CAATTTGTCACCTCTGCGGATGTCTCCACTGCATGCGCCGAAGCGGTGCGCGTCCAAGCT TCTGTGCCGGCCTCACTGCCCCGGAGCGACAGGGAAGGAGACAAACATCGCGAAGCAGTG GAGAAGGAAGGGACACCCGCCCTGGCCGACTCGCCGCTTCGAGTTCGGTGTCGTCTCGGG TCGAACGGCACAGTCTCAACTGCCTTCTCGCACGCGTGGACGCGCCTGTCGCTTCGAAAA GATGCCGACCGGACACCGGCCGCCTCGACGTCTCCGGGGCAGTCCACGGCGTCTTCGGGT GCTTCTGGGTCACCTTCTCTCGAGGAGACAGCCAGCTGGATTGGGTCCATCGGCGTGGGG GTCGGGGCGACCTGCGCCCGAGTCGGCGAATGTGCGGGCTTTGCCCCTCGCAAAGGCGGC TGGGGCGAGGCCTGCCGGCAGCGTCCATGGCGCGGCGAGCGGAGAGAAGGAAAGGCGGGG GACACGGAGCGGGGCAGTGCGGCCGAGGCCGGCCTCGAGACTCTCAAAGTTCAGGCCTTC ATTGTCGTTAACAGCTACGGCGACATCGTCGCTGCCGGAAAGGGAAGCGAAGGCTCAGTC GTCGCAGGGCCACTCAAAGACGGCGTCACGTACGCTGCCGCCGACCTGCTCCAAGAGGCC GGCATCCATGTGAGTTTGAATCGCGACGCGCTCTGGCGCGTGGCTGCGATGGCCGGTGCT GGGATGGCCCGGGCAATTCACCCTATCTTCTCGCCCGTCGATGGCGACGCAGTCATCGCC GTTTCGACTGGCGAACTCACCCATGGCGACACTGATCCGACGCTTTCGGAGATTATTGTG GGAACCATGGCTGCAGAATGTGTGGCTGAAGCTATCCAACAAGCGGCAGCAGCCTCAAAC AATTTGTGA
Download Fasta

Fasta :-

MWTGSGVSFLCHVEKPALAESQCRAASLSQESREDQPKREQECGEKAKENERFVTGASFF AFDRPLAAVGRLFGSAPATRDFGAVQIGNSVQCIHGILFGGGSVFGLDAVGGLLEFQRQR GIGVSTIAGPIPVCPALGIFDVPALPPGPSSSETRAFALPQFVTSADVSTACAEAVRVQA SVPASLPRSDREGDKHREAVEKEGTPALADSPLRVRCRLGSNGTVSTAFSHAWTRLSLRK DADRTPAASTSPGQSTASSGASGSPSLEETASWIGSIGVGVGATCARVGECAGFAPRKGG WGEACRQRPWRGERREGKAGDTERGSAAEAGLETLKVQAFIVVNSYGDIVAAGKGSEGSV VAGPLKDGVTYAAADLLQEAGIHVSLNRDALWRVAAMAGAGMARAIHPIFSPVDGDAVIA VSTGELTHGDTDPTLSEIIVGTMAAECVAEAIQQAAAASNNL

DmpA-like

No Results

	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method
	NCLIV_032060	266 S	SGSPSLEET	0.997	unsp	NCLIV_032060	266 S	SGSPSLEET	0.997	unsp	NCLIV_032060	266 S	SGSPSLEET	0.997	unsp	NCLIV_032060	326 S	TERGSAAEA	0.993	unsp	NCLIV_032060	411 S	HPIFSPVDG	0.996	unsp	NCLIV_032060	32 S	LSQESREDQ	0.998	unsp	NCLIV_032060	189 S	SLPRSDREG	0.997	unsp

NCLIV_032060 | putative peptidase family T4

ID's

UniProt_ID: F0VI58

GEO Functions

Computed_GO_Component_IDs:

Computed_GO_Components:

Computed_GO_Function_IDs:

Computed_GO_Functions:

Computed_GO_Process_IDs:

Computed_GO_Processes:

Curated_GO_Component_IDs:

Curated_GO_Components:

Curated_GO_Function_IDs:

Curated_GO_Functions:

Curated_GO_Processes:

Subcellular Localization

Targetp

Signalp

Fasta :-

Mitoprot

ProPeptide Prediction

Sequence

Nucleotide sequence

Fasta :-

Protein sequence

Fasta :-

Domains

DmpA-like

Structure

Post Translational Modifications

N_Linked Glycosylation

O_Linked Glycosylation

Phosphorylation

Protein-Protein Interaction

String

Literature

PubMed

Google Scholar

Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India