NCLIV_033100 | putative prolidase

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0004177      GO:0030145      

  • Computed_GO_Functions:  aminopeptidase activity      manganese ion binding      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
NCLIV_033100OTHER0.9999600.0000390.000001
No Results

  • Fasta :-

    >NCLIV_033100 MASAASSSPESNDTDPHSPNSWYCSASSFSTPDAEPPPLRSTLEKHLSPFKGCAHAPGQN PVANHQAKPWLHWPSSLDDVRQSDAHRELHAYLTSYKTVAAMTRQVREVVFKAYETATAS ATQTARDTNVAAFFQGGSAADWAFYASDCDKAVFRQEQFFRYLFGVNEPDVFGLLDFSRR QAVLFVPWTSPDYQRFMGPPRPAEWYMKRYGLDGAIVYKAGLDEIREELNKRQIGHLHVL RGKNSDSDRLIEPPSVARDLGVPSVDSSHFLYDLLTECRVHKTELEREYLRAACLVSSQG HAFVMRNVYAGMVEGQAEALFRAFVHYAGGARHVAYDCICCAGPHGAILHYGHAGRPNDG VIKPGDMLLFDMGGEYSGYSTDITLSYPVDGMCSPEQRVVYEAAYDAQRAVEMAMKPGVK WTDMHRLAEKKILERLLAAGVISGPLEACIAAHLGSVFMPHGLGHLLGLDTHDVGGFSGE FPRSSEPGLCYLRTTRRLEENMVITVEPGCYFVPFLIDKALSDSTQSRLINKTALAPYMR LGGVRLEDVVIVTSDGIENLTVVPRRLEEVEELLATRTGRDSALGATEQKKRKAALQ
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NCLIV_033100.fa Sequence name : NCLIV_033100 Sequence length : 597 VALUES OF COMPUTED PARAMETERS Coef20 : 3.252 CoefTot : 0.618 ChDiff : -11 ZoneTo : 9 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.329 1.729 0.293 0.632 MesoH : -0.300 0.387 -0.260 0.266 MuHd_075 : 2.527 4.989 1.276 1.247 MuHd_095 : 5.312 3.913 2.584 1.858 MuHd_100 : 9.761 6.895 3.209 1.918 MuHd_105 : 13.428 8.395 3.439 1.789 Hmax_075 : -1.050 -3.500 -2.826 0.455 Hmax_095 : 2.000 -2.000 -2.339 1.160 Hmax_100 : 2.000 -2.000 -2.339 1.160 Hmax_105 : 8.600 -0.200 -0.156 0.607 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9916 0.0084 DFMC : 0.9860 0.0140
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 597 NCLIV_033100 MASAASSSPESNDTDPHSPNSWYCSASSFSTPDAEPPPLRSTLEKHLSPFKGCAHAPGQNPVANHQAKPWLHWPSSLDDV 80 RQSDAHRELHAYLTSYKTVAAMTRQVREVVFKAYETATASATQTARDTNVAAFFQGGSAADWAFYASDCDKAVFRQEQFF 160 RYLFGVNEPDVFGLLDFSRRQAVLFVPWTSPDYQRFMGPPRPAEWYMKRYGLDGAIVYKAGLDEIREELNKRQIGHLHVL 240 RGKNSDSDRLIEPPSVARDLGVPSVDSSHFLYDLLTECRVHKTELEREYLRAACLVSSQGHAFVMRNVYAGMVEGQAEAL 320 FRAFVHYAGGARHVAYDCICCAGPHGAILHYGHAGRPNDGVIKPGDMLLFDMGGEYSGYSTDITLSYPVDGMCSPEQRVV 400 YEAAYDAQRAVEMAMKPGVKWTDMHRLAEKKILERLLAAGVISGPLEACIAAHLGSVFMPHGLGHLLGLDTHDVGGFSGE 480 FPRSSEPGLCYLRTTRRLEENMVITVEPGCYFVPFLIDKALSDSTQSRLINKTALAPYMRLGGVRLEDVVIVTSDGIENL 560 TVVPRRLEEVEELLATRTGRDSALGATEQKKRKAALQ 640 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ..................................... 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NCLIV_033100 40 AEPPPLR|ST 0.117 . NCLIV_033100 45 LRSTLEK|HL 0.105 . NCLIV_033100 51 KHLSPFK|GC 0.062 . NCLIV_033100 68 VANHQAK|PW 0.081 . NCLIV_033100 81 SSLDDVR|QS 0.096 . NCLIV_033100 87 RQSDAHR|EL 0.137 . NCLIV_033100 97 AYLTSYK|TV 0.073 . NCLIV_033100 104 TVAAMTR|QV 0.151 . NCLIV_033100 107 AMTRQVR|EV 0.234 . NCLIV_033100 112 VREVVFK|AY 0.090 . NCLIV_033100 126 SATQTAR|DT 0.116 . NCLIV_033100 151 YASDCDK|AV 0.109 . NCLIV_033100 155 CDKAVFR|QE 0.079 . NCLIV_033100 161 RQEQFFR|YL 0.115 . NCLIV_033100 179 GLLDFSR|RQ 0.070 . NCLIV_033100 180 LLDFSRR|QA 0.129 . NCLIV_033100 195 TSPDYQR|FM 0.147 . NCLIV_033100 201 RFMGPPR|PA 0.122 . NCLIV_033100 208 PAEWYMK|RY 0.065 . NCLIV_033100 209 AEWYMKR|YG 0.169 . NCLIV_033100 219 DGAIVYK|AG 0.066 . NCLIV_033100 226 AGLDEIR|EE 0.067 . NCLIV_033100 231 IREELNK|RQ 0.064 . NCLIV_033100 232 REELNKR|QI 0.186 . NCLIV_033100 241 GHLHVLR|GK 0.076 . NCLIV_033100 243 LHVLRGK|NS 0.061 . NCLIV_033100 249 KNSDSDR|LI 0.114 . NCLIV_033100 258 EPPSVAR|DL 0.128 . NCLIV_033100 279 DLLTECR|VH 0.069 . NCLIV_033100 282 TECRVHK|TE 0.101 . NCLIV_033100 287 HKTELER|EY 0.073 . NCLIV_033100 291 LEREYLR|AA 0.088 . NCLIV_033100 306 GHAFVMR|NV 0.198 . NCLIV_033100 322 QAEALFR|AF 0.100 . NCLIV_033100 332 HYAGGAR|HV 0.097 . NCLIV_033100 356 HYGHAGR|PN 0.109 . NCLIV_033100 363 PNDGVIK|PG 0.063 . NCLIV_033100 398 MCSPEQR|VV 0.137 . NCLIV_033100 409 AAYDAQR|AV 0.123 . NCLIV_033100 416 AVEMAMK|PG 0.062 . NCLIV_033100 420 AMKPGVK|WT 0.066 . NCLIV_033100 426 KWTDMHR|LA 0.095 . NCLIV_033100 430 MHRLAEK|KI 0.062 . NCLIV_033100 431 HRLAEKK|IL 0.128 . NCLIV_033100 435 EKKILER|LL 0.083 . NCLIV_033100 483 FSGEFPR|SS 0.268 . NCLIV_033100 493 PGLCYLR|TT 0.070 . NCLIV_033100 496 CYLRTTR|RL 0.157 . NCLIV_033100 497 YLRTTRR|LE 0.118 . NCLIV_033100 519 VPFLIDK|AL 0.073 . NCLIV_033100 528 SDSTQSR|LI 0.119 . NCLIV_033100 532 QSRLINK|TA 0.064 . NCLIV_033100 540 ALAPYMR|LG 0.093 . NCLIV_033100 545 MRLGGVR|LE 0.100 . NCLIV_033100 565 NLTVVPR|RL 0.111 . NCLIV_033100 566 LTVVPRR|LE 0.134 . NCLIV_033100 577 EELLATR|TG 0.069 . NCLIV_033100 580 LATRTGR|DS 0.302 . NCLIV_033100 590 LGATEQK|KR 0.062 . NCLIV_033100 591 GATEQKK|RK 0.089 . NCLIV_033100 592 ATEQKKR|KA 0.184 . NCLIV_033100 593 TEQKKRK|AA 0.142 . ____________________________^_________________

  • Fasta :-

    >NCLIV_033100 ATGGCGTCGGCCGCGAGTTCCTCCCCCGAATCAAACGACACCGATCCTCACTCCCCCAAC TCGTGGTACTGCTCCGCAAGTAGCTTCTCCACCCCTGACGCGGAGCCCCCGCCTCTGAGG TCGACTCTCGAGAAACATCTAAGCCCCTTCAAGGGCTGTGCACATGCTCCGGGGCAAAAT CCAGTGGCGAATCACCAGGCCAAGCCGTGGTTGCACTGGCCCTCCTCTCTTGACGATGTC CGACAGAGCGACGCTCACAGAGAACTTCATGCTTATCTCACAAGTTACAAAACAGTAGCT GCGATGACGCGTCAAGTTCGCGAGGTAGTCTTTAAGGCCTACGAAACAGCAACGGCCTCG GCAACCCAAACGGCGAGAGATACGAATGTGGCTGCTTTCTTCCAGGGAGGGTCTGCTGCC GACTGGGCCTTCTACGCATCCGACTGCGACAAGGCCGTTTTCCGACAGGAACAGTTCTTC CGCTACCTCTTTGGCGTCAACGAGCCCGATGTGTTTGGACTGCTCGACTTCAGCCGGCGT CAAGCGGTGCTCTTTGTGCCGTGGACGTCGCCGGATTACCAGAGGTTCATGGGGCCCCCG CGACCAGCTGAGTGGTACATGAAGCGGTACGGCCTTGACGGGGCGATCGTCTACAAAGCT GGTCTCGACGAAATTCGAGAGGAACTGAACAAGAGACAAATTGGCCATCTGCATGTTCTG CGCGGAAAAAACAGCGACAGTGATCGACTCATCGAGCCACCCTCTGTGGCGCGTGACCTC GGCGTCCCCTCCGTCGATAGTTCTCACTTTCTCTATGATCTCCTTACAGAGTGTCGCGTT CACAAGACAGAATTGGAACGCGAGTACCTTCGAGCTGCGTGCTTAGTCTCGTCGCAAGGG CATGCATTCGTCATGCGCAACGTGTACGCCGGCATGGTTGAAGGTCAGGCGGAGGCGCTT TTCCGCGCCTTCGTTCACTACGCTGGCGGCGCGAGACACGTTGCCTACGACTGCATTTGC TGTGCGGGGCCTCACGGAGCAATCCTTCACTACGGCCACGCTGGCCGACCGAATGACGGG GTCATCAAGCCCGGAGACATGCTCCTCTTCGACATGGGCGGAGAGTACAGCGGCTACTCC ACAGACATCACACTCAGTTACCCCGTCGACGGCATGTGCAGCCCCGAACAGCGTGTCGTC TACGAGGCTGCATACGATGCGCAGAGGGCCGTGGAAATGGCCATGAAGCCGGGGGTCAAG TGGACAGACATGCACCGGTTAGCGGAGAAGAAAATATTGGAGAGACTCCTGGCGGCCGGC GTTATCAGCGGGCCTCTGGAGGCCTGCATCGCGGCGCACCTGGGGAGTGTCTTCATGCCT CACGGTCTAGGTCACCTTCTCGGTCTCGACACCCACGACGTGGGTGGATTCTCTGGAGAA TTTCCTCGGAGTTCGGAGCCGGGGCTCTGCTACCTGCGGACCACTCGGCGACTCGAAGAA AACATGGTCATCACGGTGGAGCCAGGTTGCTACTTTGTGCCGTTTCTCATTGACAAAGCG CTTAGCGACTCCACCCAAAGTCGATTAATAAACAAAACCGCATTGGCGCCGTACATGCGA CTTGGTGGCGTTAGGCTAGAAGACGTCGTCATTGTCACTTCTGATGGCATCGAAAACCTC ACTGTCGTGCCCCGTCGCCTAGAAGAGGTCGAGGAGCTTCTGGCTACCCGAACAGGGAGA GATAGCGCGCTTGGGGCCACGGAACAGAAGAAGCGAAAGGCAGCTCTACAGTGA
  • Download Fasta

  • Fasta :-

    MASAASSSPESNDTDPHSPNSWYCSASSFSTPDAEPPPLRSTLEKHLSPFKGCAHAPGQN PVANHQAKPWLHWPSSLDDVRQSDAHRELHAYLTSYKTVAAMTRQVREVVFKAYETATAS ATQTARDTNVAAFFQGGSAADWAFYASDCDKAVFRQEQFFRYLFGVNEPDVFGLLDFSRR QAVLFVPWTSPDYQRFMGPPRPAEWYMKRYGLDGAIVYKAGLDEIREELNKRQIGHLHVL RGKNSDSDRLIEPPSVARDLGVPSVDSSHFLYDLLTECRVHKTELEREYLRAACLVSSQG HAFVMRNVYAGMVEGQAEALFRAFVHYAGGARHVAYDCICCAGPHGAILHYGHAGRPNDG VIKPGDMLLFDMGGEYSGYSTDITLSYPVDGMCSPEQRVVYEAAYDAQRAVEMAMKPGVK WTDMHRLAEKKILERLLAAGVISGPLEACIAAHLGSVFMPHGLGHLLGLDTHDVGGFSGE FPRSSEPGLCYLRTTRRLEENMVITVEPGCYFVPFLIDKALSDSTQSRLINKTALAPYMR LGGVRLEDVVIVTSDGIENLTVVPRRLEEVEELLATRTGRDSALGATEQKKRKAALQ

  • title: active site
  • coordinates: H350,D371,D382,H465,E507,E547
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
NCLIV_033100124 TSATQTARDT0.992unspNCLIV_033100124 TSATQTARDT0.992unspNCLIV_033100124 TSATQTARDT0.992unspNCLIV_0331008 SAASSSPESN0.997unspNCLIV_03310030 SASSFSTPDA0.996unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India