NCLIV_034810 | putative eukaryotic aspartyl protease

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_IDPredictionOTHERSPmTPCS_Position
NCLIV_034810OTHER0.9536230.0264640.019913
No Results

  • Fasta :-

    >NCLIV_034810 MIQAVMENDLSDLAVSSCDDKKRLPDLILQFLGNPQQGADSVVEVRLSPDDYVLEFVEDD GSHECMLGIAADDAEDENVFLRGYYTVFDRDNLQIGFARAKH
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NCLIV_034810.fa Sequence name : NCLIV_034810 Sequence length : 102 VALUES OF COMPUTED PARAMETERS Coef20 : 3.753 CoefTot : -0.014 ChDiff : -14 ZoneTo : 6 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : -0.112 0.506 -0.295 0.317 MesoH : -1.746 -0.126 -0.618 0.087 MuHd_075 : 27.663 20.539 7.224 5.380 MuHd_095 : 17.563 14.187 5.350 3.870 MuHd_100 : 7.810 5.008 1.845 1.683 MuHd_105 : 6.487 4.082 2.048 0.705 Hmax_075 : 19.133 20.767 3.038 6.067 Hmax_095 : 10.675 13.825 2.181 4.288 Hmax_100 : 10.200 11.500 0.687 3.830 Hmax_105 : 7.117 6.600 0.283 2.310 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.6195 0.3805 DFMC : 0.6487 0.3513
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 102 NCLIV_034810 MIQAVMENDLSDLAVSSCDDKKRLPDLILQFLGNPQQGADSVVEVRLSPDDYVLEFVEDDGSHECMLGIAADDAEDENVF 80 LRGYYTVFDRDNLQIGFARAKH 160 ................................................................................ 80 ...................... 160 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NCLIV_034810 21 VSSCDDK|KR 0.059 . NCLIV_034810 22 SSCDDKK|RL 0.101 . NCLIV_034810 23 SCDDKKR|LP 0.172 . NCLIV_034810 46 DSVVEVR|LS 0.071 . NCLIV_034810 82 DENVFLR|GY 0.115 . NCLIV_034810 90 YYTVFDR|DN 0.102 . NCLIV_034810 99 LQIGFAR|AK 0.111 . NCLIV_034810 101 IGFARAK|H- 0.069 . ____________________________^_________________

  • Fasta :-

    >NCLIV_034810 ATGATTCAGGCCGTCATGGAGAACGACCTCAGTGATCTCGCAGTTTCCTCCTGCGATGAC AAGAAGAGACTTCCTGATTTGATTTTGCAGTTCCTGGGTAATCCACAGCAAGGCGCGGAC TCTGTCGTGGAGGTGCGACTGAGCCCGGACGACTACGTCCTTGAATTCGTTGAAGACGAT GGAAGTCACGAGTGTATGCTCGGAATAGCTGCCGACGACGCTGAAGACGAGAATGTTTTC CTCCGAGGTTATTATACAGTCTTCGATAGAGACAACCTGCAAATTGGATTTGCTCGTGCA AAGCACTAA
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  • Fasta :-

    MIQAVMENDLSDLAVSSCDDKKRLPDLILQFLGNPQQGADSVVEVRLSPDDYVLEFVEDD GSHECMLGIAADDAEDENVFLRGYYTVFDRDNLQIGFARAKH

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
NCLIV_03481016 SDLAVSSCDD0.996unspNCLIV_03481048 SEVRLSPDDY0.998unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India