NCLIV_038200 | putative subtilase family serine protease

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0004252      

  • Computed_GO_Functions:  serine-type endopeptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
NCLIV_038200SP0.0871320.9082030.004664CS pos: 35-36. TRA-GP. Pr: 0.7983
No Results

  • Fasta :-

    >NCLIV_038200 MTCVGIRWKKGFQRWAAYGFLWISVVLVLTVATRAGPISGEGGQEKPGAALATRAALLSD LALTANPTDRRSDGNRDGGSRASGVTDSPEFMWNRKLELDPDEAPNPTAVASEVLSLRQA NTSSRRVVLSYSLKGCPPEKLEVGRDADHPTAIHGQEASSRTMHLLRDRVSWLLHAKKMV KEVESVSPKRDEILGYGQDFHVSLRVTVEMESRYLSALQMEIIKTLPEGVSDDEVIQIAR DLPCVEKAYHDSLKFSEQYLRHPVSDEDEDGMNMGTKRLLQRQSPGQSATHSLDSLGARV TKAFETEDILSHADADVQVPPNDPSFRLQWNLQDKAEFGLHTEKAWQLWTGQKRPMVIAV IDSGCEIDHPDLKAKKWHNPGEICNDGIDNDANGFIDDCHGWDFATDRPDVRSDTTGHGT GAAGVLGAVPNNLIGLAGVCWGCEIMCLKFIGGGQGTVSNQVQAIDYAVRMGAWISNNSY GGYGYSNLEFDAIRRAQVAGHLFVTSAGNHNLNTDLPQNDHTPSSYDLSNILSVGASTHI GRKAAFSNYGLTTVHVFAPGADIHTTEGAAGYSKVSGTSFACPHAAGLAGLIWSAFPNLT YLQVKRALIEGCRPSSHLWSLAACGGTIDAHKSLYIAAKLSSGPMPEGNPSRTRDNEKPD VDEAGPAARLSGLWDVSSRGENTHFISLVWW
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NCLIV_038200.fa Sequence name : NCLIV_038200 Sequence length : 691 VALUES OF COMPUTED PARAMETERS Coef20 : 4.171 CoefTot : -0.482 ChDiff : -17 ZoneTo : 40 KR : 5 DE : 0 CleavSite : 36 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.041 2.165 0.332 0.804 MesoH : 0.348 0.449 -0.140 0.335 MuHd_075 : 35.944 23.749 9.286 8.543 MuHd_095 : 34.446 16.774 7.476 7.946 MuHd_100 : 33.577 14.986 6.618 8.225 MuHd_105 : 31.044 13.554 4.628 7.167 Hmax_075 : 18.000 19.200 3.346 6.800 Hmax_095 : 15.662 8.137 2.756 6.125 Hmax_100 : 15.100 9.000 3.596 6.130 Hmax_105 : 4.300 18.700 1.950 5.098 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.3007 0.6993 DFMC : 0.3318 0.6682 This protein is probably imported in mitochondria. f(Ser) = 0.0500 f(Arg) = 0.0750 CMi = 0.28571 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 691 NCLIV_038200 MTCVGIRWKKGFQRWAAYGFLWISVVLVLTVATRAGPISGEGGQEKPGAALATRAALLSDLALTANPTDRRSDGNRDGGS 80 RASGVTDSPEFMWNRKLELDPDEAPNPTAVASEVLSLRQANTSSRRVVLSYSLKGCPPEKLEVGRDADHPTAIHGQEASS 160 RTMHLLRDRVSWLLHAKKMVKEVESVSPKRDEILGYGQDFHVSLRVTVEMESRYLSALQMEIIKTLPEGVSDDEVIQIAR 240 DLPCVEKAYHDSLKFSEQYLRHPVSDEDEDGMNMGTKRLLQRQSPGQSATHSLDSLGARVTKAFETEDILSHADADVQVP 320 PNDPSFRLQWNLQDKAEFGLHTEKAWQLWTGQKRPMVIAVIDSGCEIDHPDLKAKKWHNPGEICNDGIDNDANGFIDDCH 400 GWDFATDRPDVRSDTTGHGTGAAGVLGAVPNNLIGLAGVCWGCEIMCLKFIGGGQGTVSNQVQAIDYAVRMGAWISNNSY 480 GGYGYSNLEFDAIRRAQVAGHLFVTSAGNHNLNTDLPQNDHTPSSYDLSNILSVGASTHIGRKAAFSNYGLTTVHVFAPG 560 ADIHTTEGAAGYSKVSGTSFACPHAAGLAGLIWSAFPNLTYLQVKRALIEGCRPSSHLWSLAACGGTIDAHKSLYIAAKL 640 SSGPMPEGNPSRTRDNEKPDVDEAGPAARLSGLWDVSSRGENTHFISLVWW 720 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................... 720 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NCLIV_038200 7 MTCVGIR|WK 0.086 . NCLIV_038200 9 CVGIRWK|KG 0.057 . NCLIV_038200 10 VGIRWKK|GF 0.228 . NCLIV_038200 14 WKKGFQR|WA 0.141 . NCLIV_038200 34 VLTVATR|AG 0.079 . NCLIV_038200 46 GEGGQEK|PG 0.061 . NCLIV_038200 54 GAALATR|AA 0.088 . NCLIV_038200 70 TANPTDR|RS 0.124 . NCLIV_038200 71 ANPTDRR|SD 0.174 . NCLIV_038200 76 RRSDGNR|DG 0.158 . NCLIV_038200 81 NRDGGSR|AS 0.086 . NCLIV_038200 95 PEFMWNR|KL 0.080 . NCLIV_038200 96 EFMWNRK|LE 0.063 . NCLIV_038200 118 SEVLSLR|QA 0.093 . NCLIV_038200 125 QANTSSR|RV 0.097 . NCLIV_038200 126 ANTSSRR|VV 0.112 . NCLIV_038200 134 VLSYSLK|GC 0.070 . NCLIV_038200 140 KGCPPEK|LE 0.055 . NCLIV_038200 145 EKLEVGR|DA 0.154 . NCLIV_038200 161 GQEASSR|TM 0.085 . NCLIV_038200 167 RTMHLLR|DR 0.098 . NCLIV_038200 169 MHLLRDR|VS 0.062 . NCLIV_038200 177 SWLLHAK|KM 0.063 . NCLIV_038200 178 WLLHAKK|MV 0.171 . NCLIV_038200 181 HAKKMVK|EV 0.081 . NCLIV_038200 189 VESVSPK|RD 0.072 . NCLIV_038200 190 ESVSPKR|DE 0.196 . NCLIV_038200 205 DFHVSLR|VT 0.086 . NCLIV_038200 213 TVEMESR|YL 0.115 . NCLIV_038200 224 LQMEIIK|TL 0.060 . NCLIV_038200 240 EVIQIAR|DL 0.110 . NCLIV_038200 247 DLPCVEK|AY 0.071 . NCLIV_038200 254 AYHDSLK|FS 0.105 . NCLIV_038200 261 FSEQYLR|HP 0.071 . NCLIV_038200 277 GMNMGTK|RL 0.065 . NCLIV_038200 278 MNMGTKR|LL 0.200 . NCLIV_038200 282 TKRLLQR|QS 0.104 . NCLIV_038200 299 LDSLGAR|VT 0.112 . NCLIV_038200 302 LGARVTK|AF 0.170 . NCLIV_038200 327 PNDPSFR|LQ 0.083 . NCLIV_038200 335 QWNLQDK|AE 0.065 . NCLIV_038200 344 FGLHTEK|AW 0.059 . NCLIV_038200 353 QLWTGQK|RP 0.054 . NCLIV_038200 354 LWTGQKR|PM 0.139 . NCLIV_038200 373 IDHPDLK|AK 0.065 . NCLIV_038200 375 HPDLKAK|KW 0.076 . NCLIV_038200 376 PDLKAKK|WH 0.103 . NCLIV_038200 408 WDFATDR|PD 0.087 . NCLIV_038200 412 TDRPDVR|SD 0.166 . NCLIV_038200 449 CEIMCLK|FI 0.107 . NCLIV_038200 470 AIDYAVR|MG 0.077 . NCLIV_038200 494 LEFDAIR|RA 0.095 . NCLIV_038200 495 EFDAIRR|AQ 0.097 . NCLIV_038200 542 ASTHIGR|KA 0.090 . NCLIV_038200 543 STHIGRK|AA 0.093 . NCLIV_038200 574 GAAGYSK|VS 0.071 . NCLIV_038200 605 LTYLQVK|RA 0.064 . NCLIV_038200 606 TYLQVKR|AL 0.184 . NCLIV_038200 613 ALIEGCR|PS 0.072 . NCLIV_038200 632 GTIDAHK|SL 0.080 . NCLIV_038200 639 SLYIAAK|LS 0.078 . NCLIV_038200 652 PEGNPSR|TR 0.092 . NCLIV_038200 654 GNPSRTR|DN 0.119 . NCLIV_038200 658 RTRDNEK|PD 0.062 . NCLIV_038200 669 EAGPAAR|LS 0.091 . NCLIV_038200 679 LWDVSSR|GE 0.092 . ____________________________^_________________

  • Fasta :-

    >NCLIV_038200 ATGACGTGTGTGGGGATAAGGTGGAAGAAAGGATTCCAGAGGTGGGCGGCATATGGTTTC CTGTGGATAAGCGTTGTCCTCGTCCTCACTGTTGCCACTCGGGCCGGCCCAATCTCAGGG GAAGGAGGACAGGAAAAGCCAGGCGCAGCTCTTGCGACGAGGGCAGCATTACTCTCCGAC CTTGCGTTAACGGCAAACCCTACCGACAGACGATCAGATGGAAATCGGGACGGCGGCTCC CGCGCTTCGGGCGTGACAGATTCACCTGAGTTTATGTGGAATCGCAAGCTAGAGTTAGAC CCTGATGAAGCCCCCAATCCGACAGCAGTTGCTTCAGAAGTTCTCTCTCTTCGTCAAGCA AACACAAGCAGCAGACGTGTCGTGCTGAGTTACTCTCTCAAGGGCTGTCCACCAGAGAAA CTTGAAGTGGGCCGAGATGCAGACCATCCGACGGCAATTCATGGACAAGAAGCTAGCAGC CGTACGATGCATCTGTTAAGAGATCGAGTTTCTTGGCTCCTTCATGCTAAAAAAATGGTA AAAGAAGTTGAATCTGTGAGTCCAAAGCGTGACGAAATCTTGGGATACGGACAAGATTTC CATGTAAGTTTAAGGGTGACTGTCGAGATGGAAAGTCGATATTTGTCAGCTTTGCAAATG GAGATCATCAAGACGCTGCCTGAGGGGGTCTCGGATGATGAAGTCATACAAATTGCTCGA GATCTTCCTTGTGTTGAGAAGGCATACCACGACTCCTTGAAGTTCTCTGAGCAATACCTA AGACATCCTGTTTCGGATGAAGATGAGGATGGCATGAACATGGGAACGAAGCGCCTTCTT CAGCGGCAGAGTCCGGGGCAATCCGCCACACACTCTCTCGATTCCCTGGGGGCACGCGTT ACGAAAGCTTTTGAAACAGAGGACATTTTATCACACGCCGATGCTGACGTCCAAGTTCCT CCCAATGACCCAAGTTTCCGCCTCCAGTGGAACCTGCAGGATAAGGCAGAGTTTGGTTTG CACACCGAAAAAGCGTGGCAGCTCTGGACGGGCCAGAAGCGCCCGATGGTGATTGCTGTC ATCGATAGCGGCTGTGAAATAGACCATCCAGACCTCAAGGCGAAAAAGTGGCACAACCCT GGAGAAATCTGCAACGACGGTATCGATAACGACGCAAACGGATTCATTGATGACTGCCAT GGGTGGGATTTCGCGACAGATCGTCCAGACGTCCGCTCGGACACGACTGGACACGGGACG GGAGCTGCAGGTGTTCTTGGCGCGGTGCCGAACAATTTGATAGGCCTGGCTGGGGTTTGC TGGGGCTGTGAAATCATGTGTCTGAAATTCATTGGCGGCGGACAAGGAACAGTTAGCAAC CAAGTCCAAGCCATTGATTACGCTGTTAGAATGGGAGCGTGGATTAGTAACAACTCTTAT GGTGGATACGGGTATTCGAATCTTGAATTCGACGCCATCAGGCGAGCTCAGGTTGCTGGG CATCTCTTCGTCACTTCTGCAGGCAATCACAACCTGAACACCGATCTGCCACAGAACGAC CATACCCCTTCGAGTTATGACCTCTCTAACATCTTGAGTGTTGGAGCGTCGACGCACATC GGTAGAAAAGCAGCCTTCTCTAACTACGGACTCACGACTGTTCACGTGTTCGCTCCTGGG GCAGATATTCACACGACCGAAGGTGCAGCAGGGTACTCTAAAGTAAGCGGAACTTCGTTC GCGTGCCCGCATGCCGCGGGTCTGGCCGGGTTGATTTGGTCTGCGTTTCCCAACTTGACG TACCTTCAAGTGAAACGCGCTTTGATTGAGGGATGCAGGCCAAGTTCGCATCTCTGGTCA CTAGCTGCATGCGGAGGGACAATCGACGCCCACAAGTCTCTGTACATTGCCGCGAAACTG TCGAGTGGGCCAATGCCCGAAGGGAATCCGTCGCGTACTCGAGATAATGAAAAACCCGAC GTGGATGAAGCAGGCCCGGCAGCCCGTCTCTCAGGGCTGTGGGACGTTTCCTCCCGAGGA GAGAACACCCACTTCATTTCCCTCGTTTGGTGGTGA
  • Download Fasta

  • Fasta :-

    MTCVGIRWKKGFQRWAAYGFLWISVVLVLTVATRAGPISGEGGQEKPGAALATRAALLSD LALTANPTDRRSDGNRDGGSRASGVTDSPEFMWNRKLELDPDEAPNPTAVASEVLSLRQA NTSSRRVVLSYSLKGCPPEKLEVGRDADHPTAIHGQEASSRTMHLLRDRVSWLLHAKKMV KEVESVSPKRDEILGYGQDFHVSLRVTVEMESRYLSALQMEIIKTLPEGVSDDEVIQIAR DLPCVEKAYHDSLKFSEQYLRHPVSDEDEDGMNMGTKRLLQRQSPGQSATHSLDSLGARV TKAFETEDILSHADADVQVPPNDPSFRLQWNLQDKAEFGLHTEKAWQLWTGQKRPMVIAV IDSGCEIDHPDLKAKKWHNPGEICNDGIDNDANGFIDDCHGWDFATDRPDVRSDTTGHGT GAAGVLGAVPNNLIGLAGVCWGCEIMCLKFIGGGQGTVSNQVQAIDYAVRMGAWISNNSY GGYGYSNLEFDAIRRAQVAGHLFVTSAGNHNLNTDLPQNDHTPSSYDLSNILSVGASTHI GRKAAFSNYGLTTVHVFAPGADIHTTEGAAGYSKVSGTSFACPHAAGLAGLIWSAFPNLT YLQVKRALIEGCRPSSHLWSLAACGGTIDAHKSLYIAAKLSSGPMPEGNPSRTRDNEKPD VDEAGPAARLSGLWDVSSRGENTHFISLVWW

  • title: catalytic triad
  • coordinates: D362,H418,S579
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
NCLIV_038200265 SRHPVSDEDE0.997unspNCLIV_038200265 SRHPVSDEDE0.997unspNCLIV_038200265 SRHPVSDEDE0.997unspNCLIV_038200311 SEDILSHADA0.995unspNCLIV_03820072 STDRRSDGNR0.995unspNCLIV_038200187 SVESVSPKRD0.998unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India