NCLIV_040050 | putative WD domain, G-beta repeat-containing protein

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0005515      

  • Computed_GO_Functions:  protein binding      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

No Results
No Results

  • Fasta :-

    >NCLIV_040050 MEKGRATNYNRPDEGSHPSGSPQASLETTGGQVTSVSATGSSGHGKECDEEANTGPQAVS LVYRHIFGATAEVKNAVHFVVQGVVAYPAGHHVVLYSTETRTQKFLPGSDESLGCTCLAI STNRRFLAVGERCTQRALVTIHDLLTNKRKKSLAFVECISNSFVSLAFSADTKMLLALGG PPDWCLVYWAWEKPKVLASYKINGPSKIRYCECSFNPLDSNVVCMIGDGVSRLMKLQEGG FRPMQNHLLKREGQGYSCHAWLADGNIVAGTEAGELVLFDNGGDFRGSLTCAPGAKRSVL CIVPTSKGFICGGEDATLHMYEKTDDDQYKTSMELKVEHQNPGLDVCELKPLIVTCGEDR SIRVWDFLKNTMELCKFYSEEVYSVAFHPSGFHILAGFSDKLRLMNLLLDDLTTMREFII KGCRECRFSNGGHLFAAVHSNLIQVYETYTCRSLVTLRGHNSKVRSLCWSPDDSILVSTG MDGAVYEFSVMKEGLRLSDWVYKGINFSSAVVRRGDEEAVNTLFVVGSDNSLKVVSNSQL VNTYDAGSTLSSLALPRTTRALFAGTADPGAPGQLRSYAFPLTGEYLRYQCHAGPVQRIC VSKDERLVISCGIDGTLCICGIVDKDRAVDDEEELTGPTVYTDEVLVTRTQVRERKAQMT ELERQVEDLTNQMDFQLRNRETQHKEQLLQLEERYNHELELERNKYDILREEKQEQEQEF MDQERVREDKHAATVQQMETNFQNKMTIEVARYHKVLSERERDNAAWEERLKQVTEDFSA KLAQMTAEFESSKKASRDELASLREQQDLAFKTHQELLRQIEEDADREIEELKEAYEEKL AHENAEKVRLRGQTGIHRKRHEDLKEQTELLKEELKHKEEASQRYRTDIDKLLTDREIVL KEIQERDRTIGDKEQRVYELKKQNQELEKFKFVLGHKIRELKAMIDPKDKTIADMQRQIQ AMDAELVDYHRQNKLANLELGQLKLKQRALQDEIVDRRQQLAIAEQQMKRMKNDLYECVQ NIQDPKKRKEAITRLYQKYITNELAKNDVDFDILKEQNRQRDYLEKSVESLKRRLAKDSE VHRQDNIKIMQENASLICEINDLRREVNLLRLERQESRVPGASRNSLKSRKKADTGRQPG EATQGPNTHEELAKTVEMQRKQIELLTAQNDALQHKLNQKQTRYLPPKPQNHPPRRASKT EEKKLPQRIPSFSKKPPDSERGSPRTSQRQVTKPSPNYSEATKEAVTPPKRRPSSSKRPT SSPESSVSHEIGTEPESARIENASETNVNEAGPDPCGLRRDAHRLDGATNKRTPEEAETE SLPAYTQEEGEQEKPGEQNQTRSGVNEHGLDETNGDTRPLEAPVEEQEAQPSDCSEPAQN NDGEEKVGDVFSDPSAEKSAHEMEEAR
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NCLIV_040050.fa Sequence name : NCLIV_040050 Sequence length : 1407 VALUES OF COMPUTED PARAMETERS Coef20 : 2.722 CoefTot : 0.000 ChDiff : -29 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.459 2.076 0.586 0.658 MesoH : -0.318 0.391 -0.236 0.232 MuHd_075 : 8.936 9.042 4.222 0.576 MuHd_095 : 19.770 6.895 6.485 1.746 MuHd_100 : 15.652 6.209 5.671 1.488 MuHd_105 : 4.749 3.076 3.093 0.870 Hmax_075 : -14.787 -9.275 -6.676 -1.820 Hmax_095 : -11.300 -9.300 -4.851 -1.740 Hmax_100 : -10.700 -9.200 -4.815 -1.440 Hmax_105 : -16.537 -10.383 -6.340 -0.957 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9996 0.0004 DFMC : 0.9992 0.0008
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 1407 NCLIV_040050 MEKGRATNYNRPDEGSHPSGSPQASLETTGGQVTSVSATGSSGHGKECDEEANTGPQAVSLVYRHIFGATAEVKNAVHFV 80 VQGVVAYPAGHHVVLYSTETRTQKFLPGSDESLGCTCLAISTNRRFLAVGERCTQRALVTIHDLLTNKRKKSLAFVECIS 160 NSFVSLAFSADTKMLLALGGPPDWCLVYWAWEKPKVLASYKINGPSKIRYCECSFNPLDSNVVCMIGDGVSRLMKLQEGG 240 FRPMQNHLLKREGQGYSCHAWLADGNIVAGTEAGELVLFDNGGDFRGSLTCAPGAKRSVLCIVPTSKGFICGGEDATLHM 320 YEKTDDDQYKTSMELKVEHQNPGLDVCELKPLIVTCGEDRSIRVWDFLKNTMELCKFYSEEVYSVAFHPSGFHILAGFSD 400 KLRLMNLLLDDLTTMREFIIKGCRECRFSNGGHLFAAVHSNLIQVYETYTCRSLVTLRGHNSKVRSLCWSPDDSILVSTG 480 MDGAVYEFSVMKEGLRLSDWVYKGINFSSAVVRRGDEEAVNTLFVVGSDNSLKVVSNSQLVNTYDAGSTLSSLALPRTTR 560 ALFAGTADPGAPGQLRSYAFPLTGEYLRYQCHAGPVQRICVSKDERLVISCGIDGTLCICGIVDKDRAVDDEEELTGPTV 640 YTDEVLVTRTQVRERKAQMTELERQVEDLTNQMDFQLRNRETQHKEQLLQLEERYNHELELERNKYDILREEKQEQEQEF 720 MDQERVREDKHAATVQQMETNFQNKMTIEVARYHKVLSERERDNAAWEERLKQVTEDFSAKLAQMTAEFESSKKASRDEL 800 ASLREQQDLAFKTHQELLRQIEEDADREIEELKEAYEEKLAHENAEKVRLRGQTGIHRKRHEDLKEQTELLKEELKHKEE 880 ASQRYRTDIDKLLTDREIVLKEIQERDRTIGDKEQRVYELKKQNQELEKFKFVLGHKIRELKAMIDPKDKTIADMQRQIQ 960 AMDAELVDYHRQNKLANLELGQLKLKQRALQDEIVDRRQQLAIAEQQMKRMKNDLYECVQNIQDPKKRKEAITRLYQKYI 1040 TNELAKNDVDFDILKEQNRQRDYLEKSVESLKRRLAKDSEVHRQDNIKIMQENASLICEINDLRREVNLLRLERQESRVP 1120 GASRNSLKSRKKADTGRQPGEATQGPNTHEELAKTVEMQRKQIELLTAQNDALQHKLNQKQTRYLPPKPQNHPPRRASKT 1200 EEKKLPQRIPSFSKKPPDSERGSPRTSQRQVTKPSPNYSEATKEAVTPPKRRPSSSKRPTSSPESSVSHEIGTEPESARI 1280 ENASETNVNEAGPDPCGLRRDAHRLDGATNKRTPEEAETESLPAYTQEEGEQEKPGEQNQTRSGVNEHGLDETNGDTRPL 1360 EAPVEEQEAQPSDCSEPAQNNDGEEKVGDVFSDPSAEKSAHEMEEAR 1440 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 ................................................................................ 880 ................................................................................ 960 ................................................................................ 1040 ................................................................................ 1120 ................................................................................ 1200 ................................................................................ 1280 ................................................................................ 1360 ............................................... 1440 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NCLIV_040050 3 ----MEK|GR 0.061 . NCLIV_040050 5 --MEKGR|AT 0.122 . NCLIV_040050 11 RATNYNR|PD 0.097 . NCLIV_040050 46 GSSGHGK|EC 0.102 . NCLIV_040050 64 AVSLVYR|HI 0.162 . NCLIV_040050 74 GATAEVK|NA 0.064 . NCLIV_040050 101 LYSTETR|TQ 0.076 . NCLIV_040050 104 TETRTQK|FL 0.145 . NCLIV_040050 124 LAISTNR|RF 0.078 . NCLIV_040050 125 AISTNRR|FL 0.239 . NCLIV_040050 132 FLAVGER|CT 0.097 . NCLIV_040050 136 GERCTQR|AL 0.106 . NCLIV_040050 148 HDLLTNK|RK 0.051 . NCLIV_040050 149 DLLTNKR|KK 0.123 . NCLIV_040050 150 LLTNKRK|KS 0.082 . NCLIV_040050 151 LTNKRKK|SL 0.229 . NCLIV_040050 173 AFSADTK|ML 0.067 . NCLIV_040050 193 VYWAWEK|PK 0.052 . NCLIV_040050 195 WAWEKPK|VL 0.063 . NCLIV_040050 201 KVLASYK|IN 0.067 . NCLIV_040050 207 KINGPSK|IR 0.059 . NCLIV_040050 209 NGPSKIR|YC 0.093 . NCLIV_040050 232 IGDGVSR|LM 0.079 . NCLIV_040050 235 GVSRLMK|LQ 0.204 . NCLIV_040050 242 LQEGGFR|PM 0.075 . NCLIV_040050 250 MQNHLLK|RE 0.083 . NCLIV_040050 251 QNHLLKR|EG 0.153 . NCLIV_040050 286 DNGGDFR|GS 0.085 . NCLIV_040050 296 TCAPGAK|RS 0.057 . NCLIV_040050 297 CAPGAKR|SV 0.344 . NCLIV_040050 307 CIVPTSK|GF 0.066 . NCLIV_040050 323 TLHMYEK|TD 0.077 . NCLIV_040050 330 TDDDQYK|TS 0.068 . NCLIV_040050 336 KTSMELK|VE 0.066 . NCLIV_040050 350 LDVCELK|PL 0.061 . NCLIV_040050 360 VTCGEDR|SI 0.102 . NCLIV_040050 363 GEDRSIR|VW 0.236 . NCLIV_040050 369 RVWDFLK|NT 0.057 . NCLIV_040050 376 NTMELCK|FY 0.073 . NCLIV_040050 401 LAGFSDK|LR 0.057 . NCLIV_040050 403 GFSDKLR|LM 0.087 . NCLIV_040050 416 DDLTTMR|EF 0.075 . NCLIV_040050 421 MREFIIK|GC 0.077 . NCLIV_040050 424 FIIKGCR|EC 0.074 . NCLIV_040050 427 KGCRECR|FS 0.311 . NCLIV_040050 452 YETYTCR|SL 0.106 . NCLIV_040050 458 RSLVTLR|GH 0.086 . NCLIV_040050 463 LRGHNSK|VR 0.060 . NCLIV_040050 465 GHNSKVR|SL 0.202 . NCLIV_040050 492 YEFSVMK|EG 0.057 . NCLIV_040050 496 VMKEGLR|LS 0.077 . NCLIV_040050 503 LSDWVYK|GI 0.069 . NCLIV_040050 513 FSSAVVR|RG 0.109 . NCLIV_040050 514 SSAVVRR|GD 0.351 . NCLIV_040050 533 GSDNSLK|VV 0.079 . NCLIV_040050 557 SSLALPR|TT 0.100 . NCLIV_040050 560 ALPRTTR|AL 0.291 . NCLIV_040050 576 GAPGQLR|SY 0.120 . NCLIV_040050 588 LTGEYLR|YQ 0.099 . NCLIV_040050 598 HAGPVQR|IC 0.081 . NCLIV_040050 603 QRICVSK|DE 0.082 . NCLIV_040050 606 CVSKDER|LV 0.111 . NCLIV_040050 625 ICGIVDK|DR 0.062 . NCLIV_040050 627 GIVDKDR|AV 0.224 . NCLIV_040050 649 DEVLVTR|TQ 0.072 . NCLIV_040050 653 VTRTQVR|ER 0.091 . NCLIV_040050 655 RTQVRER|KA 0.106 . NCLIV_040050 656 TQVRERK|AQ 0.266 . NCLIV_040050 664 QMTELER|QV 0.113 . NCLIV_040050 678 QMDFQLR|NR 0.085 . NCLIV_040050 680 DFQLRNR|ET 0.088 . NCLIV_040050 685 NRETQHK|EQ 0.063 . NCLIV_040050 694 LLQLEER|YN 0.109 . NCLIV_040050 703 HELELER|NK 0.084 . NCLIV_040050 705 LELERNK|YD 0.057 . NCLIV_040050 710 NKYDILR|EE 0.096 . NCLIV_040050 713 DILREEK|QE 0.108 . NCLIV_040050 725 EFMDQER|VR 0.093 . NCLIV_040050 727 MDQERVR|ED 0.096 . NCLIV_040050 730 ERVREDK|HA 0.258 . NCLIV_040050 745 ETNFQNK|MT 0.079 . NCLIV_040050 752 MTIEVAR|YH 0.091 . NCLIV_040050 755 EVARYHK|VL 0.130 . NCLIV_040050 760 HKVLSER|ER 0.087 . NCLIV_040050 762 VLSERER|DN 0.141 . NCLIV_040050 770 NAAWEER|LK 0.088 . NCLIV_040050 772 AWEERLK|QV 0.069 . NCLIV_040050 781 TEDFSAK|LA 0.067 . NCLIV_040050 793 AEFESSK|KA 0.071 . NCLIV_040050 794 EFESSKK|AS 0.108 . NCLIV_040050 797 SSKKASR|DE 0.112 . NCLIV_040050 804 DELASLR|EQ 0.067 . NCLIV_040050 812 QQDLAFK|TH 0.057 . NCLIV_040050 819 THQELLR|QI 0.105 . NCLIV_040050 827 IEEDADR|EI 0.085 . NCLIV_040050 833 REIEELK|EA 0.066 . NCLIV_040050 839 KEAYEEK|LA 0.072 . NCLIV_040050 847 AHENAEK|VR 0.059 . NCLIV_040050 849 ENAEKVR|LR 0.113 . NCLIV_040050 851 AEKVRLR|GQ 0.098 . NCLIV_040050 858 GQTGIHR|KR 0.074 . NCLIV_040050 859 QTGIHRK|RH 0.091 . NCLIV_040050 860 TGIHRKR|HE 0.275 . NCLIV_040050 865 KRHEDLK|EQ 0.070 . NCLIV_040050 872 EQTELLK|EE 0.053 . NCLIV_040050 876 LLKEELK|HK 0.061 . NCLIV_040050 878 KEELKHK|EE 0.059 . NCLIV_040050 884 KEEASQR|YR 0.097 . NCLIV_040050 886 EASQRYR|TD 0.107 . NCLIV_040050 891 YRTDIDK|LL 0.064 . NCLIV_040050 896 DKLLTDR|EI 0.076 . NCLIV_040050 901 DREIVLK|EI 0.067 . NCLIV_040050 906 LKEIQER|DR 0.111 . NCLIV_040050 908 EIQERDR|TI 0.129 . NCLIV_040050 913 DRTIGDK|EQ 0.061 . NCLIV_040050 916 IGDKEQR|VY 0.079 . NCLIV_040050 921 QRVYELK|KQ 0.071 . NCLIV_040050 922 RVYELKK|QN 0.103 . NCLIV_040050 929 QNQELEK|FK 0.070 . NCLIV_040050 931 QELEKFK|FV 0.077 . NCLIV_040050 937 KFVLGHK|IR 0.053 . NCLIV_040050 939 VLGHKIR|EL 0.108 . NCLIV_040050 942 HKIRELK|AM 0.110 . NCLIV_040050 948 KAMIDPK|DK 0.085 . NCLIV_040050 950 MIDPKDK|TI 0.076 . NCLIV_040050 957 TIADMQR|QI 0.112 . NCLIV_040050 971 ELVDYHR|QN 0.072 . NCLIV_040050 974 DYHRQNK|LA 0.140 . NCLIV_040050 984 LELGQLK|LK 0.061 . NCLIV_040050 986 LGQLKLK|QR 0.058 . NCLIV_040050 988 QLKLKQR|AL 0.118 . NCLIV_040050 997 QDEIVDR|RQ 0.077 . NCLIV_040050 998 DEIVDRR|QQ 0.108 . NCLIV_040050 1009 IAEQQMK|RM 0.058 . NCLIV_040050 1010 AEQQMKR|MK 0.167 . NCLIV_040050 1012 QQMKRMK|ND 0.060 . NCLIV_040050 1026 QNIQDPK|KR 0.061 . NCLIV_040050 1027 NIQDPKK|RK 0.111 . NCLIV_040050 1028 IQDPKKR|KE 0.137 . NCLIV_040050 1029 QDPKKRK|EA 0.114 . NCLIV_040050 1034 RKEAITR|LY 0.104 . NCLIV_040050 1038 ITRLYQK|YI 0.072 . NCLIV_040050 1046 ITNELAK|ND 0.060 . NCLIV_040050 1055 VDFDILK|EQ 0.058 . NCLIV_040050 1059 ILKEQNR|QR 0.095 . NCLIV_040050 1061 KEQNRQR|DY 0.103 . NCLIV_040050 1066 QRDYLEK|SV 0.110 . NCLIV_040050 1072 KSVESLK|RR 0.056 . NCLIV_040050 1073 SVESLKR|RL 0.129 . NCLIV_040050 1074 VESLKRR|LA 0.294 . NCLIV_040050 1077 LKRRLAK|DS 0.337 . NCLIV_040050 1083 KDSEVHR|QD 0.119 . NCLIV_040050 1088 HRQDNIK|IM 0.067 . NCLIV_040050 1104 CEINDLR|RE 0.062 . NCLIV_040050 1105 EINDLRR|EV 0.142 . NCLIV_040050 1111 REVNLLR|LE 0.070 . NCLIV_040050 1114 NLLRLER|QE 0.209 . NCLIV_040050 1118 LERQESR|VP 0.102 . NCLIV_040050 1124 RVPGASR|NS 0.078 . NCLIV_040050 1128 ASRNSLK|SR 0.099 . NCLIV_040050 1130 RNSLKSR|KK 0.153 . NCLIV_040050 1131 NSLKSRK|KA 0.144 . NCLIV_040050 1132 SLKSRKK|AD 0.113 . NCLIV_040050 1137 KKADTGR|QP 0.130 . NCLIV_040050 1154 THEELAK|TV 0.117 . NCLIV_040050 1160 KTVEMQR|KQ 0.074 . NCLIV_040050 1161 TVEMQRK|QI 0.114 . NCLIV_040050 1176 NDALQHK|LN 0.069 . NCLIV_040050 1180 QHKLNQK|QT 0.064 . NCLIV_040050 1183 LNQKQTR|YL 0.157 . NCLIV_040050 1188 TRYLPPK|PQ 0.071 . NCLIV_040050 1195 PQNHPPR|RA 0.201 . NCLIV_040050 1196 QNHPPRR|AS 0.280 . NCLIV_040050 1199 PPRRASK|TE 0.220 . NCLIV_040050 1203 ASKTEEK|KL 0.068 . NCLIV_040050 1204 SKTEEKK|LP 0.079 . NCLIV_040050 1208 EKKLPQR|IP 0.076 . NCLIV_040050 1214 RIPSFSK|KP 0.063 . NCLIV_040050 1215 IPSFSKK|PP 0.187 . NCLIV_040050 1221 KPPDSER|GS 0.081 . NCLIV_040050 1225 SERGSPR|TS 0.117 . NCLIV_040050 1229 SPRTSQR|QV 0.176 . NCLIV_040050 1233 SQRQVTK|PS 0.067 . NCLIV_040050 1243 NYSEATK|EA 0.065 . NCLIV_040050 1250 EAVTPPK|RR 0.055 . NCLIV_040050 1251 AVTPPKR|RP 0.102 . NCLIV_040050 1252 VTPPKRR|PS 0.191 . NCLIV_040050 1257 RRPSSSK|RP 0.068 . NCLIV_040050 1258 RPSSSKR|PT 0.410 . NCLIV_040050 1279 TEPESAR|IE 0.114 . NCLIV_040050 1299 PDPCGLR|RD 0.070 . NCLIV_040050 1300 DPCGLRR|DA 0.232 . NCLIV_040050 1304 LRRDAHR|LD 0.114 . NCLIV_040050 1311 LDGATNK|RT 0.066 . NCLIV_040050 1312 DGATNKR|TP 0.183 . NCLIV_040050 1334 EEGEQEK|PG 0.067 . NCLIV_040050 1342 GEQNQTR|SG 0.119 . NCLIV_040050 1358 ETNGDTR|PL 0.092 . NCLIV_040050 1386 NNDGEEK|VG 0.056 . NCLIV_040050 1398 SDPSAEK|SA 0.106 . NCLIV_040050 1407 HEMEEAR|-- 0.103 . ____________________________^_________________

  • Fasta :-

    >NCLIV_040050 ATGGAGAAAGGCCGGGCAACGAATTACAACCGACCGGACGAAGGCTCACATCCGTCGGGG TCACCACAGGCGTCTTTAGAGACCACCGGAGGACAGGTTACGAGCGTCAGTGCAACAGGT TCTTCTGGCCATGGCAAAGAATGTGACGAAGAGGCGAACACCGGGCCACAAGCCGTCAGT TTGGTGTATCGTCACATCTTTGGCGCAACGGCGGAGGTCAAGAATGCTGTCCACTTCGTT GTACAAGGGGTGGTTGCCTATCCAGCTGGTCATCATGTTGTCCTTTATTCCACCGAAACG AGGACGCAGAAGTTCCTACCTGGATCTGATGAATCCTTGGGATGCACCTGTCTAGCGATC AGCACGAATAGGCGGTTCCTAGCAGTCGGCGAGAGGTGCACGCAGAGAGCTTTGGTGACA ATTCACGACCTACTGACGAATAAGAGGAAGAAGTCTTTAGCCTTTGTCGAGTGCATCTCC AACAGCTTCGTCAGTCTTGCGTTTTCGGCCGACACCAAAATGCTCTTGGCTCTTGGTGGC CCCCCCGACTGGTGTCTTGTATACTGGGCCTGGGAGAAACCCAAAGTCCTCGCTTCTTAC AAGATCAACGGCCCTTCAAAAATCCGTTATTGCGAATGTTCCTTCAATCCACTTGACTCC AACGTGGTTTGTATGATTGGCGACGGAGTGAGTCGTTTGATGAAGCTCCAGGAAGGGGGT TTCCGCCCCATGCAGAACCACCTGTTGAAGCGAGAGGGGCAAGGATATTCCTGCCATGCT TGGCTGGCCGACGGAAACATCGTAGCCGGCACGGAAGCAGGTGAATTGGTCCTCTTCGAC AACGGAGGAGACTTCAGAGGGTCGCTGACGTGTGCTCCGGGTGCCAAGCGTTCAGTTCTC TGTATCGTTCCAACCAGCAAAGGATTCATTTGTGGCGGCGAAGATGCCACGTTGCACATG TATGAAAAAACTGATGATGACCAGTACAAAACATCAATGGAGCTGAAAGTCGAACACCAA AACCCAGGACTGGATGTATGTGAGCTAAAGCCGCTAATTGTGACGTGCGGAGAAGACAGA TCCATCCGAGTCTGGGATTTCCTCAAAAACACTATGGAGCTCTGCAAATTCTACTCCGAA GAGGTCTACAGCGTCGCTTTTCATCCGTCGGGTTTTCACATCCTCGCGGGGTTTTCCGAC AAGCTCCGGCTCATGAACTTGTTACTCGACGACCTCACCACGATGAGAGAGTTCATCATC AAAGGCTGTCGCGAATGTCGCTTCTCGAATGGCGGCCACCTCTTTGCGGCCGTTCATTCC AATTTGATACAAGTCTACGAGACATACACTTGCCGCTCTCTAGTTACTCTACGAGGCCAT AACTCGAAAGTGCGGTCGCTATGCTGGTCGCCTGACGATTCCATTCTCGTCTCCACAGGC ATGGATGGAGCTGTGTACGAGTTCTCGGTCATGAAGGAGGGCCTCCGTCTCTCTGACTGG GTCTACAAAGGGATAAACTTCAGCAGCGCTGTCGTCCGCCGGGGCGACGAGGAGGCCGTC AATACCCTCTTTGTTGTCGGTTCGGACAACTCTTTGAAGGTGGTTTCAAATTCGCAACTG GTCAACACCTACGATGCCGGGAGCACGCTGTCTTCTCTCGCCTTGCCAAGAACAACCAGA GCGCTGTTCGCTGGAACAGCGGATCCTGGAGCACCAGGACAGCTCCGAAGCTATGCGTTC CCACTTACAGGAGAATATCTTCGGTATCAATGCCATGCTGGGCCGGTCCAGCGGATCTGT GTTTCGAAGGACGAAAGGCTGGTGATTTCGTGCGGCATCGACGGTACCCTGTGCATATGC GGCATCGTCGACAAAGACAGAGCAGTTGATGACGAAGAAGAGTTGACAGGGCCAACGGTC TACACAGATGAAGTTCTCGTGACGCGGACCCAAGTGCGTGAACGCAAGGCTCAGATGACT GAGTTGGAGCGCCAAGTCGAGGATCTGACAAACCAGATGGATTTCCAGCTCCGAAATCGA GAAACACAACACAAAGAACAACTGCTGCAACTCGAAGAGCGCTACAACCACGAACTGGAG CTGGAAAGGAATAAGTACGACATTCTGCGCGAAGAAAAGCAAGAGCAAGAACAGGAGTTC ATGGACCAAGAGCGGGTCCGCGAAGACAAGCACGCAGCGACCGTTCAGCAGATGGAGACG AATTTCCAAAACAAAATGACCATCGAAGTCGCAAGGTACCACAAAGTCCTAAGCGAGAGA GAACGCGATAATGCAGCGTGGGAAGAGCGCCTCAAACAAGTCACCGAAGATTTCTCTGCC AAGCTTGCTCAAATGACGGCGGAGTTCGAATCTTCCAAGAAAGCTTCCCGCGATGAACTC GCGAGTCTCCGGGAACAACAGGACCTCGCGTTCAAAACGCACCAAGAGCTCCTGAGGCAA ATCGAAGAAGATGCTGATCGAGAGATCGAGGAGCTGAAAGAGGCGTACGAGGAGAAGCTG GCGCACGAGAACGCCGAGAAAGTCCGTTTGCGTGGTCAGACGGGCATCCACAGAAAACGC CACGAGGATCTGAAGGAACAAACAGAACTTCTCAAGGAAGAGTTGAAGCATAAAGAAGAG GCATCCCAGAGATATCGAACAGATATCGACAAATTGTTGACAGACCGGGAGATTGTGTTG AAGGAGATTCAGGAGCGCGATCGCACGATTGGGGACAAGGAGCAGAGGGTTTACGAGTTG AAGAAACAGAACCAGGAACTGGAAAAGTTTAAATTCGTGTTGGGGCACAAAATTCGGGAG TTGAAAGCCATGATTGATCCAAAAGACAAGACGATTGCGGACATGCAGCGCCAGATCCAG GCGATGGATGCAGAGCTCGTCGACTACCATCGCCAGAACAAACTGGCGAATTTGGAGTTG GGCCAGTTGAAATTAAAACAACGCGCTCTCCAGGACGAAATCGTGGACCGGCGTCAGCAG CTTGCCATAGCCGAGCAACAGATGAAGCGAATGAAGAACGACTTGTACGAGTGCGTTCAA AACATTCAAGACCCGAAGAAACGGAAAGAGGCGATCACGCGTCTCTACCAAAAGTACATC ACAAACGAGCTCGCCAAGAACGACGTCGACTTTGATATCCTGAAGGAGCAAAATCGGCAG AGGGACTATTTGGAGAAGTCGGTGGAGTCTCTCAAACGCCGCCTAGCCAAAGACTCGGAA GTCCACCGACAAGACAACATCAAAATCATGCAGGAGAACGCTTCCTTGATCTGTGAAATA AATGATCTCCGTCGAGAGGTCAATCTCCTCCGTCTCGAACGGCAAGAGTCGAGAGTCCCA GGCGCCTCCCGAAACAGCTTAAAATCCCGGAAGAAGGCGGATACAGGACGGCAGCCAGGT GAAGCGACCCAAGGTCCCAACACCCATGAGGAGCTGGCGAAGACGGTGGAAATGCAAAGG AAACAAATCGAGTTGCTGACGGCGCAAAACGACGCGCTCCAGCATAAGTTAAACCAGAAA CAAACTCGCTACCTGCCTCCCAAGCCCCAGAACCATCCGCCTCGGCGCGCCTCAAAGACA GAAGAAAAAAAACTCCCCCAGAGAATTCCGTCGTTCTCCAAAAAACCACCGGACAGCGAA AGGGGCAGTCCTCGTACATCCCAACGGCAAGTGACGAAACCGTCTCCCAACTATTCCGAG GCAACGAAGGAGGCTGTCACTCCACCTAAACGGAGACCCAGCTCGTCGAAGCGGCCGACG TCGTCTCCGGAATCCTCAGTCAGTCACGAGATAGGGACGGAGCCCGAATCTGCGCGAATC GAGAACGCTAGCGAGACGAACGTCAACGAGGCCGGCCCCGACCCTTGCGGCCTGCGTCGT GACGCGCACCGACTCGACGGAGCGACGAACAAACGCACGCCAGAGGAGGCGGAGACTGAA AGCCTGCCAGCGTACACCCAAGAGGAGGGAGAACAAGAAAAACCAGGGGAACAGAATCAG ACACGAAGCGGAGTGAACGAACACGGCCTGGATGAAACAAACGGAGACACCCGACCGTTG GAGGCCCCGGTTGAGGAACAAGAGGCGCAGCCCTCTGACTGCTCCGAGCCAGCGCAAAAT AACGACGGAGAGGAGAAAGTTGGTGACGTCTTTTCTGATCCCTCAGCGGAGAAGAGTGCC CACGAAATGGAAGAAGCACGGTGA
  • Download Fasta

  • Fasta :-

  • title: structural tetrad
  • coordinates: C311,D315,Y321,E322,V337,H339,T355,D359,W365,D366,Y378,L395,D400,M405,N406,I419,F435,S440,Y446,E447,G459,H460,S478,D482,Y486,E487,V525,D529,Y544,D545,C591,H592,S610,D614
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IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
NCLIV_040050792 SEFESSKKAS0.991unspNCLIV_040050792 SEFESSKKAS0.991unspNCLIV_040050792 SEFESSKKAS0.991unspNCLIV_040050796 SSKKASRDEL0.994unspNCLIV_040050802 SDELASLREQ0.993unspNCLIV_0400501126 SASRNSLKSR0.996unspNCLIV_0400501129 SNSLKSRKKA0.997unspNCLIV_0400501198 SPRRASKTEE0.998unspNCLIV_0400501213 SIPSFSKKPP0.995unspNCLIV_0400501219 SKPPDSERGS0.997unspNCLIV_0400501223 SSERGSPRTS0.997unspNCLIV_0400501227 SSPRTSQRQV0.993unspNCLIV_0400501254 SKRRPSSSKR0.996unspNCLIV_0400501255 SRRPSSSKRP0.998unspNCLIV_0400501256 SRPSSSKRPT0.995unspNCLIV_0400501261 SKRPTSSPES0.997unspNCLIV_0400501262 SRPTSSPESS0.997unspNCLIV_0400501265 SSSPESSVSH0.995unspNCLIV_040050470 SSLCWSPDDS0.993unspNCLIV_040050758 SHKVLSERER0.994unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India