NCLIV_040980 | conserved hypothetical protein

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_IDPredictionOTHERSPmTPCS_Position
NCLIV_040980OTHER0.9836060.0029500.013444
No Results

  • Fasta :-

    >NCLIV_040980 MFETCSRRAPSSLLDLLRRLELSPVPPALPSAKTLDPAEACPNSLDKNAHLEQTSECRDG LVQCRRCVDIHEALARLSLGSACESRLISNLPSIQELLRIATLKRLQLRLRSDPFLVAFS RFGGACSGRQNAEAGDFGLSRDGREGGTPEADTVHRLTRQSTSPGFKDILGSLDDPCVDS WPASATTGSADPGMPFSFDKRLLSEPRIPGLFSSVWSLPASLIRGYVHRWALVGQLTKFF ALRGGLKTTDALTEERRPPAASQGMPQLRHSEAVEPGSKTHTVHAEIEERALDALKLRAG GLWAAVRRSKEKVQRLQQLPQVLIIQISSLGVTAYGQVYKQLERCTFPLVLDALSLLGPA GDNVNGSHAHSFNSSDVCELPPQTSPGMLSSETQKRGVVTNSTTCDRGICPAAGWGCESA AETNADLQQEKLRTRFNGPLYELRAVISHLEETTQRKGIAQCDKPGSPEQGEALRARTAW TKARQDMWLRQSTILGASAASFVRVSDSCVRVVGVDEVMATAPYLLFYQVASPAVF
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NCLIV_040980.fa Sequence name : NCLIV_040980 Sequence length : 536 VALUES OF COMPUTED PARAMETERS Coef20 : 4.967 CoefTot : 0.000 ChDiff : 4 ZoneTo : 2 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.206 1.418 0.207 0.555 MesoH : -0.293 0.264 -0.304 0.213 MuHd_075 : 26.176 6.493 6.472 4.507 MuHd_095 : 49.724 29.415 12.602 10.317 MuHd_100 : 45.200 25.615 11.168 10.106 MuHd_105 : 30.360 16.033 7.080 7.684 Hmax_075 : 1.925 7.817 0.568 2.182 Hmax_095 : 17.238 17.150 3.838 5.136 Hmax_100 : 16.900 17.700 4.250 5.230 Hmax_105 : 14.117 13.100 3.508 4.270 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.2623 0.7377 DFMC : 0.5779 0.4221
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 536 NCLIV_040980 MFETCSRRAPSSLLDLLRRLELSPVPPALPSAKTLDPAEACPNSLDKNAHLEQTSECRDGLVQCRRCVDIHEALARLSLG 80 SACESRLISNLPSIQELLRIATLKRLQLRLRSDPFLVAFSRFGGACSGRQNAEAGDFGLSRDGREGGTPEADTVHRLTRQ 160 STSPGFKDILGSLDDPCVDSWPASATTGSADPGMPFSFDKRLLSEPRIPGLFSSVWSLPASLIRGYVHRWALVGQLTKFF 240 ALRGGLKTTDALTEERRPPAASQGMPQLRHSEAVEPGSKTHTVHAEIEERALDALKLRAGGLWAAVRRSKEKVQRLQQLP 320 QVLIIQISSLGVTAYGQVYKQLERCTFPLVLDALSLLGPAGDNVNGSHAHSFNSSDVCELPPQTSPGMLSSETQKRGVVT 400 NSTTCDRGICPAAGWGCESAAETNADLQQEKLRTRFNGPLYELRAVISHLEETTQRKGIAQCDKPGSPEQGEALRARTAW 480 TKARQDMWLRQSTILGASAASFVRVSDSCVRVVGVDEVMATAPYLLFYQVASPAVF 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ........................................................ 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NCLIV_040980 7 MFETCSR|RA 0.076 . NCLIV_040980 8 FETCSRR|AP 0.116 . NCLIV_040980 18 SLLDLLR|RL 0.080 . NCLIV_040980 19 LLDLLRR|LE 0.075 . NCLIV_040980 33 PALPSAK|TL 0.082 . NCLIV_040980 47 CPNSLDK|NA 0.082 . NCLIV_040980 58 EQTSECR|DG 0.076 . NCLIV_040980 65 DGLVQCR|RC 0.076 . NCLIV_040980 66 GLVQCRR|CV 0.282 . NCLIV_040980 76 IHEALAR|LS 0.083 . NCLIV_040980 86 GSACESR|LI 0.108 . NCLIV_040980 99 SIQELLR|IA 0.092 . NCLIV_040980 104 LRIATLK|RL 0.067 . NCLIV_040980 105 RIATLKR|LQ 0.118 . NCLIV_040980 109 LKRLQLR|LR 0.091 . NCLIV_040980 111 RLQLRLR|SD 0.092 . NCLIV_040980 121 FLVAFSR|FG 0.100 . NCLIV_040980 129 GGACSGR|QN 0.112 . NCLIV_040980 141 GDFGLSR|DG 0.113 . NCLIV_040980 144 GLSRDGR|EG 0.442 . NCLIV_040980 156 EADTVHR|LT 0.089 . NCLIV_040980 159 TVHRLTR|QS 0.253 . NCLIV_040980 167 STSPGFK|DI 0.096 . NCLIV_040980 200 MPFSFDK|RL 0.064 . NCLIV_040980 201 PFSFDKR|LL 0.160 . NCLIV_040980 207 RLLSEPR|IP 0.073 . NCLIV_040980 224 LPASLIR|GY 0.085 . NCLIV_040980 229 IRGYVHR|WA 0.180 . NCLIV_040980 238 LVGQLTK|FF 0.057 . NCLIV_040980 243 TKFFALR|GG 0.092 . NCLIV_040980 247 ALRGGLK|TT 0.062 . NCLIV_040980 256 DALTEER|RP 0.065 . NCLIV_040980 257 ALTEERR|PP 0.120 . NCLIV_040980 269 QGMPQLR|HS 0.168 . NCLIV_040980 279 AVEPGSK|TH 0.052 . NCLIV_040980 290 HAEIEER|AL 0.085 . NCLIV_040980 296 RALDALK|LR 0.058 . NCLIV_040980 298 LDALKLR|AG 0.086 . NCLIV_040980 307 GLWAAVR|RS 0.077 . NCLIV_040980 308 LWAAVRR|SK 0.459 . NCLIV_040980 310 AAVRRSK|EK 0.129 . NCLIV_040980 312 VRRSKEK|VQ 0.066 . NCLIV_040980 315 SKEKVQR|LQ 0.080 . NCLIV_040980 340 AYGQVYK|QL 0.072 . NCLIV_040980 344 VYKQLER|CT 0.075 . NCLIV_040980 395 LSSETQK|RG 0.061 . NCLIV_040980 396 SSETQKR|GV 0.349 . NCLIV_040980 407 NSTTCDR|GI 0.105 . NCLIV_040980 431 ADLQQEK|LR 0.055 . NCLIV_040980 433 LQQEKLR|TR 0.094 . NCLIV_040980 435 QEKLRTR|FN 0.101 . NCLIV_040980 444 GPLYELR|AV 0.116 . NCLIV_040980 456 LEETTQR|KG 0.077 . NCLIV_040980 457 EETTQRK|GI 0.088 . NCLIV_040980 464 GIAQCDK|PG 0.073 . NCLIV_040980 475 EQGEALR|AR 0.078 . NCLIV_040980 477 GEALRAR|TA 0.157 . NCLIV_040980 482 ARTAWTK|AR 0.061 . NCLIV_040980 484 TAWTKAR|QD 0.130 . NCLIV_040980 490 RQDMWLR|QS 0.080 . NCLIV_040980 504 SAASFVR|VS 0.090 . NCLIV_040980 511 VSDSCVR|VV 0.114 . ____________________________^_________________

  • Fasta :-

    >NCLIV_040980 ATGTTCGAGACGTGCTCGCGCCGCGCACCTTCGTCTTTGCTTGATCTCCTGCGAAGGCTC GAACTTTCGCCCGTTCCACCGGCTCTGCCGAGCGCTAAGACTCTTGATCCGGCAGAGGCC TGCCCGAATAGCCTGGATAAGAATGCCCACCTGGAACAGACGAGCGAGTGCCGCGACGGA CTGGTGCAGTGCCGCAGATGTGTTGACATCCACGAGGCCCTCGCAAGACTTTCTTTGGGT TCCGCCTGCGAATCTAGACTTATCTCGAATCTGCCTTCCATCCAGGAGCTTCTCCGGATC GCGACATTGAAAAGACTTCAGTTGCGACTCCGAAGCGACCCTTTCTTGGTCGCGTTTAGC CGCTTTGGCGGCGCATGCAGTGGGCGACAGAACGCGGAAGCTGGCGATTTCGGCCTTTCC AGAGACGGCCGAGAAGGCGGTACACCAGAGGCAGATACCGTCCATCGGCTCACGCGCCAG TCCACGTCCCCTGGCTTCAAAGATATCCTAGGGAGTTTGGACGATCCGTGCGTTGACAGC TGGCCAGCATCGGCAACCACCGGGTCTGCAGATCCTGGGATGCCCTTCAGCTTCGACAAA CGGCTTTTGTCCGAACCAAGAATCCCAGGCTTGTTTTCATCTGTATGGTCTTTGCCTGCG TCGCTCATCCGGGGGTACGTACACCGCTGGGCTCTCGTCGGGCAGCTGACAAAGTTTTTC GCCCTCCGAGGAGGCCTGAAAACGACGGACGCCCTGACAGAAGAGCGCCGTCCGCCAGCC GCATCACAGGGGATGCCGCAGCTGCGCCATTCAGAGGCGGTGGAGCCGGGCTCAAAGACC CATACGGTACACGCTGAAATAGAGGAGAGGGCTCTCGATGCCTTGAAACTTCGCGCCGGT GGGCTGTGGGCCGCAGTTCGGCGCTCCAAGGAAAAGGTTCAACGCCTTCAACAGCTGCCT CAAGTCCTCATTATTCAGATCAGTTCATTAGGCGTCACGGCGTACGGTCAAGTCTACAAG CAGCTGGAGCGCTGTACCTTTCCTCTTGTACTTGATGCCTTGTCTCTTCTTGGGCCTGCG GGGGATAATGTGAACGGCAGTCATGCCCATTCTTTTAACAGCAGTGACGTCTGTGAGCTA CCCCCGCAGACCAGCCCGGGAATGCTGAGTTCGGAAACTCAGAAGCGAGGAGTGGTAACC AATTCTACGACATGCGACCGGGGAATCTGCCCAGCTGCAGGATGGGGGTGTGAGAGTGCG GCGGAGACGAATGCCGATCTCCAGCAGGAGAAGCTGAGAACTCGATTTAATGGCCCGCTG TACGAGCTCAGGGCTGTCATCAGTCATCTGGAAGAAACGACCCAACGCAAGGGTATTGCG CAGTGCGACAAGCCTGGTAGTCCTGAGCAAGGAGAGGCACTTCGCGCTCGTACAGCGTGG ACCAAGGCGAGGCAGGATATGTGGCTGCGCCAGAGCACCATTCTCGGAGCATCAGCTGCG TCGTTTGTTCGAGTGTCGGATTCCTGCGTTCGGGTTGTCGGCGTGGACGAAGTCATGGCG ACAGCGCCTTACCTTCTGTTCTACCAGGTTGCCTCTCCGGCTGTTTTTTGA
  • Download Fasta

  • Fasta :-

    MFETCSRRAPSSLLDLLRRLELSPVPPALPSAKTLDPAEACPNSLDKNAHLEQTSECRDG LVQCRRCVDIHEALARLSLGSACESRLISNLPSIQELLRIATLKRLQLRLRSDPFLVAFS RFGGACSGRQNAEAGDFGLSRDGREGGTPEADTVHRLTRQSTSPGFKDILGSLDDPCVDS WPASATTGSADPGMPFSFDKRLLSEPRIPGLFSSVWSLPASLIRGYVHRWALVGQLTKFF ALRGGLKTTDALTEERRPPAASQGMPQLRHSEAVEPGSKTHTVHAEIEERALDALKLRAG GLWAAVRRSKEKVQRLQQLPQVLIIQISSLGVTAYGQVYKQLERCTFPLVLDALSLLGPA GDNVNGSHAHSFNSSDVCELPPQTSPGMLSSETQKRGVVTNSTTCDRGICPAAGWGCESA AETNADLQQEKLRTRFNGPLYELRAVISHLEETTQRKGIAQCDKPGSPEQGEALRARTAW TKARQDMWLRQSTILGASAASFVRVSDSCVRVVGVDEVMATAPYLLFYQVASPAVF

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
NCLIV_040980467 SDKPGSPEQG0.996unspNCLIV_040980467 SDKPGSPEQG0.996unspNCLIV_040980467 SDKPGSPEQG0.996unspNCLIV_040980161 SLTRQSTSPG0.992unspNCLIV_040980163 SRQSTSPGFK0.993unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India