NCLIV_041870 | hypothetical protein

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0008234      

  • Computed_GO_Functions:  cysteine-type peptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
NCLIV_041870SP0.0030890.9968370.000074CS pos: 31-32. VRA-DL. Pr: 0.9374
No Results

  • Fasta :-

    >NCLIV_041870 MEGMWSLRRRCAALLLFIGPLGFLGWTGVRADLPIHATVHDIKGDWTFYLTPAVSGDVSS CGSPSPNTNTANLRDELKDYKSFLATQGGIKTEVRVSLTDIPVSFATTRSAATLESPHRA SWKTLGVFDGQDKQRLVGSWTTVYDEGFEVDIGGSTRLMGFMKYNPHSHCSVADGDLENS QGATACYATDPSRTQIGWYIQQQEGGSRVSGCFYAEKSGASSSTPAAFVAIREASSVERP SGPADGSELKDSTSYISQSFVDTHNASPASSWRAGVNSVFANVNRRDLSRFVKDFGFKKM RVAGDNAGVLSFMQSSTEISTAEGDAAASQVYACPCKRGEKSLDTRKLNQLEDTLEVLSP VSALEVGRTNFLAPIRSHVHQVASTTTGPEAQSKQLAPGATVANTQDPLTLPKEFSWSDP FSNKAFDEKVTNQGSCGSCYAVAATYALQKRFEIAASRMLGKEVRLFGTVKDDAVTDSEE VSFLNIGNTSELGELSSQSVLSCSFYNQGCDGGFPYLVGKHARDIGIPQVRCMEYHGNHS ESCPFQTATGSPEAGSESMLQADANLGACAEHARWYAKDYGYIGGCYECNQCSGEQQIML EIYKNGPVPVAFDAPPSLFSYSSGIYDANSSHARVCDNDSPHCSGVLTGWEYTNHAVTLV GWGETNAENEKPRKYWIVRNTWGPNWGVQGYLKIARGKNLGGIESQATFIDPDFTRGQGL RVAKAIDAMKRGSSLP
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NCLIV_041870.fa Sequence name : NCLIV_041870 Sequence length : 736 VALUES OF COMPUTED PARAMETERS Coef20 : 4.589 CoefTot : 0.071 ChDiff : -13 ZoneTo : 31 KR : 4 DE : 1 CleavSite : 12 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.094 1.812 0.374 0.813 MesoH : -0.275 0.209 -0.294 0.231 MuHd_075 : 24.572 15.600 6.745 5.202 MuHd_095 : 21.420 14.975 7.874 4.310 MuHd_100 : 23.192 18.018 8.069 4.569 MuHd_105 : 23.785 17.752 7.089 4.705 Hmax_075 : 16.700 18.100 4.529 5.890 Hmax_095 : 16.537 17.063 4.464 5.766 Hmax_100 : 17.900 24.100 4.942 6.110 Hmax_105 : 21.200 16.275 4.722 6.370 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7932 0.2068 DFMC : 0.7706 0.2294
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 736 NCLIV_041870 MEGMWSLRRRCAALLLFIGPLGFLGWTGVRADLPIHATVHDIKGDWTFYLTPAVSGDVSSCGSPSPNTNTANLRDELKDY 80 KSFLATQGGIKTEVRVSLTDIPVSFATTRSAATLESPHRASWKTLGVFDGQDKQRLVGSWTTVYDEGFEVDIGGSTRLMG 160 FMKYNPHSHCSVADGDLENSQGATACYATDPSRTQIGWYIQQQEGGSRVSGCFYAEKSGASSSTPAAFVAIREASSVERP 240 SGPADGSELKDSTSYISQSFVDTHNASPASSWRAGVNSVFANVNRRDLSRFVKDFGFKKMRVAGDNAGVLSFMQSSTEIS 320 TAEGDAAASQVYACPCKRGEKSLDTRKLNQLEDTLEVLSPVSALEVGRTNFLAPIRSHVHQVASTTTGPEAQSKQLAPGA 400 TVANTQDPLTLPKEFSWSDPFSNKAFDEKVTNQGSCGSCYAVAATYALQKRFEIAASRMLGKEVRLFGTVKDDAVTDSEE 480 VSFLNIGNTSELGELSSQSVLSCSFYNQGCDGGFPYLVGKHARDIGIPQVRCMEYHGNHSESCPFQTATGSPEAGSESML 560 QADANLGACAEHARWYAKDYGYIGGCYECNQCSGEQQIMLEIYKNGPVPVAFDAPPSLFSYSSGIYDANSSHARVCDNDS 640 PHCSGVLTGWEYTNHAVTLVGWGETNAENEKPRKYWIVRNTWGPNWGVQGYLKIARGKNLGGIESQATFIDPDFTRGQGL 720 RVAKAIDAMKRGSSLP 800 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................ 800 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NCLIV_041870 8 EGMWSLR|RR 0.084 . NCLIV_041870 9 GMWSLRR|RC 0.094 . NCLIV_041870 10 MWSLRRR|CA 0.233 . NCLIV_041870 30 LGWTGVR|AD 0.075 . NCLIV_041870 43 ATVHDIK|GD 0.067 . NCLIV_041870 74 TNTANLR|DE 0.091 . NCLIV_041870 78 NLRDELK|DY 0.072 . NCLIV_041870 81 DELKDYK|SF 0.070 . NCLIV_041870 91 ATQGGIK|TE 0.054 . NCLIV_041870 95 GIKTEVR|VS 0.077 . NCLIV_041870 109 VSFATTR|SA 0.158 . NCLIV_041870 119 TLESPHR|AS 0.106 . NCLIV_041870 123 PHRASWK|TL 0.085 . NCLIV_041870 133 VFDGQDK|QR 0.055 . NCLIV_041870 135 DGQDKQR|LV 0.142 . NCLIV_041870 157 DIGGSTR|LM 0.082 . NCLIV_041870 163 RLMGFMK|YN 0.076 . NCLIV_041870 193 YATDPSR|TQ 0.072 . NCLIV_041870 208 QQEGGSR|VS 0.074 . NCLIV_041870 217 GCFYAEK|SG 0.065 . NCLIV_041870 232 AAFVAIR|EA 0.124 . NCLIV_041870 239 EASSVER|PS 0.148 . NCLIV_041870 250 ADGSELK|DS 0.069 . NCLIV_041870 273 SPASSWR|AG 0.111 . NCLIV_041870 285 VFANVNR|RD 0.068 . NCLIV_041870 286 FANVNRR|DL 0.234 . NCLIV_041870 290 NRRDLSR|FV 0.180 . NCLIV_041870 293 DLSRFVK|DF 0.255 . NCLIV_041870 298 VKDFGFK|KM 0.062 . NCLIV_041870 299 KDFGFKK|MR 0.099 . NCLIV_041870 301 FGFKKMR|VA 0.139 . NCLIV_041870 337 VYACPCK|RG 0.068 . NCLIV_041870 338 YACPCKR|GE 0.115 . NCLIV_041870 341 PCKRGEK|SL 0.153 . NCLIV_041870 346 EKSLDTR|KL 0.125 . NCLIV_041870 347 KSLDTRK|LN 0.067 . NCLIV_041870 368 SALEVGR|TN 0.079 . NCLIV_041870 376 NFLAPIR|SH 0.098 . NCLIV_041870 394 GPEAQSK|QL 0.078 . NCLIV_041870 413 DPLTLPK|EF 0.065 . NCLIV_041870 424 SDPFSNK|AF 0.073 . NCLIV_041870 429 NKAFDEK|VT 0.071 . NCLIV_041870 450 ATYALQK|RF 0.062 . NCLIV_041870 451 TYALQKR|FE 0.225 . NCLIV_041870 458 FEIAASR|ML 0.119 . NCLIV_041870 462 ASRMLGK|EV 0.081 . NCLIV_041870 465 MLGKEVR|LF 0.117 . NCLIV_041870 471 RLFGTVK|DD 0.065 . NCLIV_041870 520 FPYLVGK|HA 0.083 . NCLIV_041870 523 LVGKHAR|DI 0.231 . NCLIV_041870 531 IGIPQVR|CM 0.104 . NCLIV_041870 574 ACAEHAR|WY 0.101 . NCLIV_041870 578 HARWYAK|DY 0.124 . NCLIV_041870 604 IMLEIYK|NG 0.051 . NCLIV_041870 634 ANSSHAR|VC 0.110 . NCLIV_041870 671 TNAENEK|PR 0.056 . NCLIV_041870 673 AENEKPR|KY 0.148 . NCLIV_041870 674 ENEKPRK|YW 0.091 . NCLIV_041870 679 RKYWIVR|NT 0.097 . NCLIV_041870 693 GVQGYLK|IA 0.067 . NCLIV_041870 696 GYLKIAR|GK 0.092 . NCLIV_041870 698 LKIARGK|NL 0.097 . NCLIV_041870 716 IDPDFTR|GQ 0.088 . NCLIV_041870 721 TRGQGLR|VA 0.130 . NCLIV_041870 724 QGLRVAK|AI 0.203 . NCLIV_041870 730 KAIDAMK|RG 0.058 . NCLIV_041870 731 AIDAMKR|GS 0.152 . ____________________________^_________________

  • Fasta :-

    >NCLIV_041870 ATGGAGGGTATGTGGTCTTTGCGCAGGAGGTGCGCTGCACTCCTGCTCTTCATCGGGCCC CTGGGTTTTCTTGGTTGGACCGGCGTGAGAGCGGACCTACCCATTCACGCCACTGTACAT GACATCAAAGGAGACTGGACCTTCTACTTAACTCCCGCTGTTTCCGGAGATGTTAGCAGC TGCGGATCCCCAAGTCCTAATACAAACACTGCGAATCTCCGCGATGAACTAAAGGACTAC AAATCCTTCTTGGCCACCCAAGGCGGAATCAAGACGGAAGTGCGAGTCTCGCTGACCGAC ATTCCAGTGTCTTTTGCGACGACCCGCAGCGCGGCCACACTCGAAAGCCCCCACCGAGCC AGCTGGAAGACTCTCGGAGTGTTTGATGGCCAGGATAAGCAACGGCTAGTGGGCAGTTGG ACAACCGTGTACGACGAAGGTTTTGAGGTGGACATTGGCGGCAGCACAAGGCTCATGGGG TTTATGAAATATAACCCGCATAGCCACTGCTCGGTTGCCGACGGGGACTTGGAGAACTCA CAAGGCGCCACGGCCTGCTATGCAACGGACCCATCGAGAACGCAAATTGGTTGGTACATC CAGCAGCAAGAAGGCGGTTCGCGCGTGTCGGGATGCTTCTATGCGGAGAAAAGCGGCGCT TCGAGCTCCACTCCGGCCGCGTTCGTCGCGATCAGGGAGGCCTCAAGCGTCGAGCGCCCG TCTGGCCCCGCCGATGGAAGCGAACTGAAAGACTCGACTTCGTATATCTCTCAGTCGTTC GTGGATACGCACAACGCGTCTCCGGCCTCGAGCTGGCGCGCGGGTGTCAACTCCGTCTTC GCGAACGTGAACCGCCGAGACCTGTCCCGTTTTGTGAAGGATTTTGGCTTCAAGAAAATG AGAGTAGCAGGCGACAACGCAGGCGTGCTTTCGTTCATGCAGTCGAGTACGGAAATTTCC ACTGCAGAGGGAGATGCCGCCGCCTCTCAGGTTTACGCGTGCCCGTGCAAGAGAGGCGAG AAGTCCTTGGATACGCGAAAGTTGAATCAGCTTGAGGATACTCTGGAGGTGCTGTCTCCA GTGAGCGCCCTGGAAGTTGGGCGCACGAACTTCTTGGCCCCAATCAGGAGTCACGTTCAC CAGGTGGCGAGTACCACAACGGGTCCAGAAGCTCAGAGCAAGCAATTGGCGCCGGGAGCA ACTGTGGCGAACACGCAGGATCCTCTGACGCTCCCCAAAGAATTCTCGTGGTCGGATCCC TTCTCTAATAAGGCGTTTGACGAGAAAGTCACCAACCAGGGAAGCTGTGGTAGCTGCTAT GCCGTCGCGGCGACGTACGCCCTGCAGAAACGTTTCGAGATTGCAGCATCTCGCATGCTT GGGAAGGAAGTCAGACTCTTTGGAACTGTGAAGGACGATGCGGTGACGGACAGCGAAGAG GTGTCGTTTCTGAACATTGGAAACACAAGCGAACTCGGCGAACTATCCTCACAATCGGTC CTCTCCTGTTCCTTCTACAACCAAGGCTGCGACGGAGGCTTCCCCTATCTTGTGGGGAAA CACGCGCGAGACATTGGCATTCCTCAAGTCAGGTGTATGGAATACCATGGCAATCACTCG GAGAGCTGTCCGTTTCAAACAGCTACGGGCTCACCAGAGGCGGGCAGTGAGTCGATGCTG CAGGCCGACGCGAATTTGGGAGCATGTGCTGAGCATGCGAGATGGTATGCGAAGGACTAC GGCTATATTGGCGGCTGCTACGAGTGCAACCAGTGCTCGGGTGAACAACAGATTATGTTG GAGATCTACAAGAACGGCCCTGTACCAGTTGCGTTCGACGCCCCTCCTTCTCTTTTTTCA TACAGCTCAGGGATCTACGACGCGAACTCCAGTCACGCTCGCGTGTGCGACAACGATTCA CCCCATTGCAGTGGCGTTCTCACCGGGTGGGAGTACACAAACCATGCAGTTACGCTGGTA GGATGGGGAGAGACGAACGCTGAGAATGAAAAACCTCGCAAGTATTGGATCGTTCGGAAC ACTTGGGGTCCCAACTGGGGTGTCCAAGGATACCTGAAGATTGCGCGTGGCAAGAACCTG GGTGGCATCGAAAGCCAAGCGACTTTCATAGATCCGGATTTCACGAGAGGCCAAGGCTTG AGGGTGGCCAAAGCCATTGATGCTATGAAGCGCGGCAGTTCACTGCCGTGA
  • Download Fasta

  • Fasta :-

    MEGMWSLRRRCAALLLFIGPLGFLGWTGVRADLPIHATVHDIKGDWTFYLTPAVSGDVSS CGSPSPNTNTANLRDELKDYKSFLATQGGIKTEVRVSLTDIPVSFATTRSAATLESPHRA SWKTLGVFDGQDKQRLVGSWTTVYDEGFEVDIGGSTRLMGFMKYNPHSHCSVADGDLENS QGATACYATDPSRTQIGWYIQQQEGGSRVSGCFYAEKSGASSSTPAAFVAIREASSVERP SGPADGSELKDSTSYISQSFVDTHNASPASSWRAGVNSVFANVNRRDLSRFVKDFGFKKM RVAGDNAGVLSFMQSSTEISTAEGDAAASQVYACPCKRGEKSLDTRKLNQLEDTLEVLSP VSALEVGRTNFLAPIRSHVHQVASTTTGPEAQSKQLAPGATVANTQDPLTLPKEFSWSDP FSNKAFDEKVTNQGSCGSCYAVAATYALQKRFEIAASRMLGKEVRLFGTVKDDAVTDSEE VSFLNIGNTSELGELSSQSVLSCSFYNQGCDGGFPYLVGKHARDIGIPQVRCMEYHGNHS ESCPFQTATGSPEAGSESMLQADANLGACAEHARWYAKDYGYIGGCYECNQCSGEQQIML EIYKNGPVPVAFDAPPSLFSYSSGIYDANSSHARVCDNDSPHCSGVLTGWEYTNHAVTLV GWGETNAENEKPRKYWIVRNTWGPNWGVQGYLKIARGKNLGGIESQATFIDPDFTRGQGL RVAKAIDAMKRGSSLP

  • title: active site
  • coordinates: Q433,C439,H655,N680
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
NCLIV_041870236 SREASSVERP0.997unspNCLIV_041870236 SREASSVERP0.997unspNCLIV_041870236 SREASSVERP0.997unspNCLIV_041870271 SSPASSWRAG0.994unspNCLIV_041870416 SPKEFSWSDP0.993unspNCLIV_04187097 SEVRVSLTDI0.998unspNCLIV_041870121 SPHRASWKTL0.995unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India