NCLIV_042660 | probable cytosol aminopeptidase, related

  • Computed_GO_Component_IDs:  GO:0005622      

  • Computed_GO_Components:  intracellular      

  • Computed_GO_Function_IDs:  GO:0004177      

  • Computed_GO_Functions:  aminopeptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
NCLIV_042660OTHER0.9996660.0003130.000021
No Results

  • Fasta :-

    >NCLIV_042660 MAKVPAPPTVVKTDPTAIPFVGCQPAKKVQMEAVDIKEAEKYTGDLAVFSVLAPGCFHDD PNASQPQKGPVALPEIAQNFDDAVGQGMLKDAADASDFKAKMGSHVFVRLPSKSSPAVKS LAALGFGSLAELTPPSVAKAASALAGMLLRGAGEKAKNVALVLPSCPKGGCPSPEGQKKT QEMKERVVTSFLETLLVELQPDLRFKGDRDGGKDSGPQLEKLTLFTDDVEAVNRSIARAK IVAPGVYFAQELVNAPANYCNPVTLAQAAVDMAKEAGLEAEVLQRDEIEKLNMGCYLAVA KGSLFPPQFIHLTYKSSNPKRKVALVGKGICFDAGGYNLKTGGAQIELMKFDMGGAAAVL GAARALGELKPENVEIHFLVAACENMISDKSYRPGDVITASNGKTVEIGNTDAEGRLTLA DALIYAEKTVKADTIVDVATLTGAVIIALGYKYAGLWSNRECMASSILKSAENSGEYMWH MPLAKDYAEALDSKCADMNNVGGKGKGGSIIAAVFLNKFVEKACWAHIDIAGTAWDTKTN RATGFGVRTLVEYIMDISEKTKEN
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NCLIV_042660.fa Sequence name : NCLIV_042660 Sequence length : 564 VALUES OF COMPUTED PARAMETERS Coef20 : 3.498 CoefTot : -2.204 ChDiff : -4 ZoneTo : 31 KR : 4 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.406 1.924 0.288 0.693 MesoH : -0.140 0.467 -0.247 0.250 MuHd_075 : 22.519 12.879 4.717 4.355 MuHd_095 : 16.259 16.215 6.731 5.714 MuHd_100 : 14.003 18.299 5.134 4.621 MuHd_105 : 23.106 18.758 7.139 4.605 Hmax_075 : 8.200 8.517 1.869 4.188 Hmax_095 : 2.712 11.725 0.309 3.973 Hmax_100 : 7.700 13.800 0.766 4.540 Hmax_105 : 8.000 15.750 1.969 4.935 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9749 0.0251 DFMC : 0.9852 0.0148
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 564 NCLIV_042660 MAKVPAPPTVVKTDPTAIPFVGCQPAKKVQMEAVDIKEAEKYTGDLAVFSVLAPGCFHDDPNASQPQKGPVALPEIAQNF 80 DDAVGQGMLKDAADASDFKAKMGSHVFVRLPSKSSPAVKSLAALGFGSLAELTPPSVAKAASALAGMLLRGAGEKAKNVA 160 LVLPSCPKGGCPSPEGQKKTQEMKERVVTSFLETLLVELQPDLRFKGDRDGGKDSGPQLEKLTLFTDDVEAVNRSIARAK 240 IVAPGVYFAQELVNAPANYCNPVTLAQAAVDMAKEAGLEAEVLQRDEIEKLNMGCYLAVAKGSLFPPQFIHLTYKSSNPK 320 RKVALVGKGICFDAGGYNLKTGGAQIELMKFDMGGAAAVLGAARALGELKPENVEIHFLVAACENMISDKSYRPGDVITA 400 SNGKTVEIGNTDAEGRLTLADALIYAEKTVKADTIVDVATLTGAVIIALGYKYAGLWSNRECMASSILKSAENSGEYMWH 480 MPLAKDYAEALDSKCADMNNVGGKGKGGSIIAAVFLNKFVEKACWAHIDIAGTAWDTKTNRATGFGVRTLVEYIMDISEK 560 TKEN 640 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 .... 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NCLIV_042660 3 ----MAK|VP 0.057 . NCLIV_042660 12 APPTVVK|TD 0.066 . NCLIV_042660 27 VGCQPAK|KV 0.078 . NCLIV_042660 28 GCQPAKK|VQ 0.103 . NCLIV_042660 37 MEAVDIK|EA 0.086 . NCLIV_042660 41 DIKEAEK|YT 0.069 . NCLIV_042660 68 NASQPQK|GP 0.068 . NCLIV_042660 90 VGQGMLK|DA 0.069 . NCLIV_042660 99 ADASDFK|AK 0.061 . NCLIV_042660 101 ASDFKAK|MG 0.093 . NCLIV_042660 109 GSHVFVR|LP 0.121 . NCLIV_042660 113 FVRLPSK|SS 0.073 . NCLIV_042660 119 KSSPAVK|SL 0.123 . NCLIV_042660 139 TPPSVAK|AA 0.116 . NCLIV_042660 150 LAGMLLR|GA 0.134 . NCLIV_042660 155 LRGAGEK|AK 0.069 . NCLIV_042660 157 GAGEKAK|NV 0.098 . NCLIV_042660 168 VLPSCPK|GG 0.064 . NCLIV_042660 178 PSPEGQK|KT 0.055 . NCLIV_042660 179 SPEGQKK|TQ 0.162 . NCLIV_042660 184 KKTQEMK|ER 0.054 . NCLIV_042660 186 TQEMKER|VV 0.159 . NCLIV_042660 204 ELQPDLR|FK 0.093 . NCLIV_042660 206 QPDLRFK|GD 0.086 . NCLIV_042660 209 LRFKGDR|DG 0.121 . NCLIV_042660 213 GDRDGGK|DS 0.104 . NCLIV_042660 221 SGPQLEK|LT 0.056 . NCLIV_042660 234 DVEAVNR|SI 0.110 . NCLIV_042660 238 VNRSIAR|AK 0.104 . NCLIV_042660 240 RSIARAK|IV 0.100 . NCLIV_042660 274 AAVDMAK|EA 0.076 . NCLIV_042660 285 EAEVLQR|DE 0.110 . NCLIV_042660 290 QRDEIEK|LN 0.061 . NCLIV_042660 301 CYLAVAK|GS 0.055 . NCLIV_042660 315 FIHLTYK|SS 0.098 . NCLIV_042660 320 YKSSNPK|RK 0.063 . NCLIV_042660 321 KSSNPKR|KV 0.446 . NCLIV_042660 322 SSNPKRK|VA 0.136 . NCLIV_042660 328 KVALVGK|GI 0.069 . NCLIV_042660 340 AGGYNLK|TG 0.071 . NCLIV_042660 350 AQIELMK|FD 0.067 . NCLIV_042660 364 AVLGAAR|AL 0.093 . NCLIV_042660 370 RALGELK|PE 0.061 . NCLIV_042660 390 ENMISDK|SY 0.097 . NCLIV_042660 393 ISDKSYR|PG 0.106 . NCLIV_042660 404 ITASNGK|TV 0.085 . NCLIV_042660 416 NTDAEGR|LT 0.071 . NCLIV_042660 428 ALIYAEK|TV 0.065 . NCLIV_042660 431 YAEKTVK|AD 0.062 . NCLIV_042660 452 IIALGYK|YA 0.070 . NCLIV_042660 460 AGLWSNR|EC 0.076 . NCLIV_042660 469 MASSILK|SA 0.128 . NCLIV_042660 485 WHMPLAK|DY 0.090 . NCLIV_042660 494 AEALDSK|CA 0.069 . NCLIV_042660 504 MNNVGGK|GK 0.101 . NCLIV_042660 506 NVGGKGK|GG 0.077 . NCLIV_042660 518 AAVFLNK|FV 0.096 . NCLIV_042660 522 LNKFVEK|AC 0.078 . NCLIV_042660 538 GTAWDTK|TN 0.068 . NCLIV_042660 541 WDTKTNR|AT 0.130 . NCLIV_042660 548 ATGFGVR|TL 0.079 . NCLIV_042660 560 IMDISEK|TK 0.065 . NCLIV_042660 562 DISEKTK|EN 0.074 . ____________________________^_________________

  • Fasta :-

    >NCLIV_042660 ATGGCCAAGGTTCCTGCGCCTCCAACTGTCGTCAAGACAGATCCCACGGCAATCCCCTTT GTCGGGTGCCAGCCTGCGAAGAAGGTTCAAATGGAGGCAGTCGACATCAAGGAAGCCGAA AAATACACCGGAGACTTGGCTGTGTTTTCAGTTCTCGCCCCAGGATGCTTCCACGACGAC CCAAATGCGTCTCAGCCACAGAAAGGACCCGTCGCACTTCCCGAAATCGCGCAAAATTTC GACGACGCTGTCGGTCAGGGCATGCTGAAGGACGCCGCCGATGCTTCCGACTTCAAAGCC AAAATGGGCTCCCACGTCTTTGTCCGTCTCCCGTCAAAGTCGTCTCCAGCTGTCAAGAGT CTGGCCGCGCTAGGCTTCGGCTCACTCGCCGAGTTGACTCCGCCCTCTGTTGCGAAGGCT GCGTCTGCGTTGGCGGGCATGCTTCTCCGAGGCGCCGGAGAGAAAGCGAAGAACGTCGCT CTCGTTCTTCCTTCCTGTCCGAAGGGGGGATGTCCCTCTCCCGAAGGCCAAAAGAAGACG CAGGAAATGAAGGAGAGAGTCGTTACCAGCTTCTTGGAGACTTTGCTCGTCGAGCTCCAG CCTGACCTGAGATTCAAGGGGGACCGCGACGGCGGAAAAGACTCCGGCCCTCAGCTCGAG AAACTCACTCTTTTCACCGATGATGTCGAAGCCGTCAACCGCTCCATTGCTCGAGCAAAG ATCGTTGCTCCAGGGGTCTACTTCGCCCAGGAGCTCGTCAATGCACCAGCGAACTACTGC AACCCCGTCACGCTCGCACAGGCCGCTGTCGACATGGCTAAAGAGGCAGGGCTAGAGGCG GAAGTGCTTCAGCGGGACGAAATCGAGAAACTGAACATGGGCTGCTACCTCGCCGTCGCG AAAGGATCGCTCTTCCCTCCTCAGTTTATTCACCTCACCTACAAGTCTTCCAATCCCAAG CGGAAGGTCGCGCTCGTCGGCAAGGGCATCTGCTTCGATGCCGGCGGCTACAACTTGAAG ACTGGCGGCGCTCAAATCGAGCTGATGAAGTTCGACATGGGAGGCGCAGCGGCTGTCCTT GGAGCCGCCCGCGCACTCGGAGAGTTGAAACCCGAAAACGTCGAGATCCACTTCCTGGTC GCAGCGTGCGAAAACATGATTTCCGATAAATCGTACCGCCCCGGAGACGTCATTACCGCG AGCAACGGGAAAACTGTCGAGATCGGAAACACCGACGCGGAAGGCAGGCTCACCCTCGCC GATGCTCTGATCTACGCGGAGAAGACAGTCAAGGCGGACACTATTGTCGATGTCGCGACG CTAACTGGAGCTGTGATCATTGCTCTCGGATACAAGTATGCTGGCTTGTGGAGCAACAGA GAATGCATGGCCAGCAGCATTCTCAAGAGCGCTGAAAATAGCGGAGAGTACATGTGGCAC ATGCCGCTAGCCAAAGACTACGCCGAGGCTCTCGACAGCAAGTGCGCCGACATGAACAAT GTCGGAGGCAAGGGGAAGGGCGGCTCCATCATCGCTGCGGTCTTCCTCAACAAATTCGTC GAGAAGGCCTGCTGGGCACACATCGACATTGCAGGAACCGCCTGGGATACGAAGACAAAC AGGGCGACAGGTTTCGGTGTCCGCACACTCGTCGAGTACATCATGGACATCAGCGAGAAA ACAAAAGAGAACTAA
  • Download Fasta

  • Fasta :-

    MAKVPAPPTVVKTDPTAIPFVGCQPAKKVQMEAVDIKEAEKYTGDLAVFSVLAPGCFHDD PNASQPQKGPVALPEIAQNFDDAVGQGMLKDAADASDFKAKMGSHVFVRLPSKSSPAVKS LAALGFGSLAELTPPSVAKAASALAGMLLRGAGEKAKNVALVLPSCPKGGCPSPEGQKKT QEMKERVVTSFLETLLVELQPDLRFKGDRDGGKDSGPQLEKLTLFTDDVEAVNRSIARAK IVAPGVYFAQELVNAPANYCNPVTLAQAAVDMAKEAGLEAEVLQRDEIEKLNMGCYLAVA KGSLFPPQFIHLTYKSSNPKRKVALVGKGICFDAGGYNLKTGGAQIELMKFDMGGAAAVL GAARALGELKPENVEIHFLVAACENMISDKSYRPGDVITASNGKTVEIGNTDAEGRLTLA DALIYAEKTVKADTIVDVATLTGAVIIALGYKYAGLWSNRECMASSILKSAENSGEYMWH MPLAKDYAEALDSKCADMNNVGGKGKGGSIIAAVFLNKFVEKACWAHIDIAGTAWDTKTN RATGFGVRTLVEYIMDISEKTKEN

  • title: Substrate-binding/catalytic site
  • coordinates: K328,D333,K340,D352,D412,E414,R416,L441
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
NCLIV_042660173 SGGCPSPEGQ0.99unspNCLIV_042660391 SISDKSYRPG0.995unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India