GLGF domain (Precursor), related

UniProt_ID: F0VC70

Computed_GO_Component_IDs:
Computed_GO_Components:
Computed_GO_Function_IDs:
Computed_GO_Functions:
Computed_GO_Process_IDs:
Computed_GO_Processes:
Curated_GO_Component_IDs:
Curated_GO_Components:
Curated_GO_Function_IDs:
Curated_GO_Functions:
Curated_GO_Processes:

	_ID	Prediction	OTHER	SP	mTP	CS_Position
	NCLIV_042710	OTHER	0.990826	0.007666	0.001509

No Results

Fasta :-
>NCLIV_042710 MIESCHLTAFPDFSPWRFLLALTFASRSSCCLRPQRCVGGAILPRTCFARRNTSLFSRFF SFLVFFLSAVLICGTPVPSSARPSPLLPLLAFLAHSSIHHPSSSPSLLLSLSLSLQRSPL SSSASPPRPSPLSARPFVSSSRASASRPSAAQLRRVYIHRAGASGVAPVSVSRARQPPSF RASTMASALSTRLSFLGRPFSGAASPLRGETASLEMEHASLCRPSKTLLPRLQIAAGSSL RRGGDFLAQRPLSPFLPVSETRARGAFLSKRFFSSSLLSPALATRSHNSLTPAPPTFFSR RCLSSSLSPLSSLSSLSSLSSLSPLSPLCSGASRSSRRAASARFSSSASFPVQSHLEGDV LPEPPAGVYTPEGLGDEGGFARGPGVSDAFFAPAGDLASPASMSFLFNSVVKVYSDFTDP NYSLPWQMQRQGTSTGSGFVLRDRLIMTNAHCVSWNNRLQVRKHGSPNKFVARIVAVGHE CDLALITVDDEAFWQGDLAQLEFGDVPALQDAVVVLGYPRGGDNLCITSGVVSRVDVNPY AHSNTCLLCVQIDAAINPGNSGGPALKDGRVVGVAFQGFDNAQNIGYIVPTTVIRHFLDD VKRHNGVYTGFPSAGIVFQHLENKSMQTFLGIDKIKPEQLPPGVEPSGILVTMADELRAG QFVRRMEGSESEKQTPENAGQKMDEKKEEKNAKEKEDEDVRMKDGTRVGLKKNDVILAID GVDVANDGTVFFREMERVNVSHTISSKFIGDTLRATVLRKKEVVDVVIPLIEENALVPKH QWDQKARYLIYGGLVFCPLTLEYLKDEFGAKFSERAPASLLQPLADIFATEEGEEPVILS HILASDLTSGYTFRNCLLTHVDGQKVLNMKHLAKLLGMPLPSSSSAPSSPSTSSLSTSGV SEKKEEEKSENDFVIFLLENKVQLVLERSKAEAMQPFILKQHAIHSPTSEVL
Download Fasta

MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NCLIV_042710.fa Sequence name : NCLIV_042710 Sequence length : 952 VALUES OF COMPUTED PARAMETERS Coef20 : 4.127 CoefTot : 0.000 ChDiff : 12 ZoneTo : 2 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.482 2.347 0.490 0.816 MesoH : 0.854 0.879 -0.010 0.354 MuHd_075 : 27.313 7.686 7.608 2.977 MuHd_095 : 1.362 8.515 1.532 1.095 MuHd_100 : 12.049 4.001 3.868 1.387 MuHd_105 : 14.914 4.560 5.399 2.403 Hmax_075 : 14.233 9.683 3.137 3.442 Hmax_095 : 4.550 7.525 -0.651 3.238 Hmax_100 : 11.300 9.100 0.429 4.060 Hmax_105 : 12.100 4.900 0.414 4.090 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9885 0.0115 DFMC : 0.9676 0.0324

##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 952 NCLIV_042710 MIESCHLTAFPDFSPWRFLLALTFASRSSCCLRPQRCVGGAILPRTCFARRNTSLFSRFFSFLVFFLSAVLICGTPVPSS 80 ARPSPLLPLLAFLAHSSIHHPSSSPSLLLSLSLSLQRSPLSSSASPPRPSPLSARPFVSSSRASASRPSAAQLRRVYIHR 160 AGASGVAPVSVSRARQPPSFRASTMASALSTRLSFLGRPFSGAASPLRGETASLEMEHASLCRPSKTLLPRLQIAAGSSL 240 RRGGDFLAQRPLSPFLPVSETRARGAFLSKRFFSSSLLSPALATRSHNSLTPAPPTFFSRRCLSSSLSPLSSLSSLSSLS 320 SLSPLSPLCSGASRSSRRAASARFSSSASFPVQSHLEGDVLPEPPAGVYTPEGLGDEGGFARGPGVSDAFFAPAGDLASP 400 ASMSFLFNSVVKVYSDFTDPNYSLPWQMQRQGTSTGSGFVLRDRLIMTNAHCVSWNNRLQVRKHGSPNKFVARIVAVGHE 480 CDLALITVDDEAFWQGDLAQLEFGDVPALQDAVVVLGYPRGGDNLCITSGVVSRVDVNPYAHSNTCLLCVQIDAAINPGN 560 SGGPALKDGRVVGVAFQGFDNAQNIGYIVPTTVIRHFLDDVKRHNGVYTGFPSAGIVFQHLENKSMQTFLGIDKIKPEQL 640 PPGVEPSGILVTMADELRAGQFVRRMEGSESEKQTPENAGQKMDEKKEEKNAKEKEDEDVRMKDGTRVGLKKNDVILAID 720 GVDVANDGTVFFREMERVNVSHTISSKFIGDTLRATVLRKKEVVDVVIPLIEENALVPKHQWDQKARYLIYGGLVFCPLT 800 LEYLKDEFGAKFSERAPASLLQPLADIFATEEGEEPVILSHILASDLTSGYTFRNCLLTHVDGQKVLNMKHLAKLLGMPL 880 PSSSSAPSSPSTSSLSTSGVSEKKEEEKSENDFVIFLLENKVQLVLERSKAEAMQPFILKQHAIHSPTSEVL 960 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 ................................................................................ 880 ........................................................................ 960 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NCLIV_042710 17 PDFSPWR|FL 0.097 . NCLIV_042710 27 ALTFASR|SS 0.103 . NCLIV_042710 33 RSSCCLR|PQ 0.120 . NCLIV_042710 36 CCLRPQR|CV 0.384 . NCLIV_042710 45 GGAILPR|TC 0.098 . NCLIV_042710 50 PRTCFAR|RN 0.101 . NCLIV_042710 51 RTCFARR|NT 0.116 . NCLIV_042710 58 NTSLFSR|FF 0.114 . NCLIV_042710 82 PVPSSAR|PS 0.066 . NCLIV_042710 117 LSLSLQR|SP 0.078 . NCLIV_042710 128 SSASPPR|PS 0.089 . NCLIV_042710 135 PSPLSAR|PF 0.085 . NCLIV_042710 142 PFVSSSR|AS 0.071 . NCLIV_042710 147 SRASASR|PS 0.131 . NCLIV_042710 154 PSAAQLR|RV 0.129 . NCLIV_042710 155 SAAQLRR|VY 0.125 . NCLIV_042710 160 RRVYIHR|AG 0.097 . NCLIV_042710 173 APVSVSR|AR 0.072 . NCLIV_042710 175 VSVSRAR|QP 0.084 . NCLIV_042710 181 RQPPSFR|AS 0.086 . NCLIV_042710 192 ASALSTR|LS 0.094 . NCLIV_042710 198 RLSFLGR|PF 0.127 . NCLIV_042710 208 GAASPLR|GE 0.119 . NCLIV_042710 223 EHASLCR|PS 0.087 . NCLIV_042710 226 SLCRPSK|TL 0.132 . NCLIV_042710 231 SKTLLPR|LQ 0.101 . NCLIV_042710 241 AAGSSLR|RG 0.091 . NCLIV_042710 242 AGSSLRR|GG 0.127 . NCLIV_042710 250 GDFLAQR|PL 0.106 . NCLIV_042710 262 LPVSETR|AR 0.109 . NCLIV_042710 264 VSETRAR|GA 0.112 . NCLIV_042710 270 RGAFLSK|RF 0.059 . NCLIV_042710 271 GAFLSKR|FF 0.261 . NCLIV_042710 285 SPALATR|SH 0.134 . NCLIV_042710 300 PPTFFSR|RC 0.073 . NCLIV_042710 301 PTFFSRR|CL 0.183 . NCLIV_042710 334 LCSGASR|SS 0.132 . NCLIV_042710 337 GASRSSR|RA 0.433 . NCLIV_042710 338 ASRSSRR|AA 0.310 . NCLIV_042710 343 RRAASAR|FS 0.190 . NCLIV_042710 382 DEGGFAR|GP 0.129 . NCLIV_042710 412 LFNSVVK|VY 0.069 . NCLIV_042710 430 LPWQMQR|QG 0.087 . NCLIV_042710 442 GSGFVLR|DR 0.109 . NCLIV_042710 444 GFVLRDR|LI 0.087 . NCLIV_042710 458 CVSWNNR|LQ 0.083 . NCLIV_042710 462 NNRLQVR|KH 0.089 . NCLIV_042710 463 NRLQVRK|HG 0.097 . NCLIV_042710 469 KHGSPNK|FV 0.089 . NCLIV_042710 473 PNKFVAR|IV 0.166 . NCLIV_042710 520 VVLGYPR|GG 0.071 . NCLIV_042710 534 TSGVVSR|VD 0.079 . NCLIV_042710 567 SGGPALK|DG 0.072 . NCLIV_042710 570 PALKDGR|VV 0.131 . NCLIV_042710 595 VPTTVIR|HF 0.079 . NCLIV_042710 602 HFLDDVK|RH 0.058 . NCLIV_042710 603 FLDDVKR|HN 0.195 . NCLIV_042710 624 FQHLENK|SM 0.079 . NCLIV_042710 634 TFLGIDK|IK 0.057 . NCLIV_042710 636 LGIDKIK|PE 0.061 . NCLIV_042710 658 TMADELR|AG 0.090 . NCLIV_042710 664 RAGQFVR|RM 0.134 . NCLIV_042710 665 AGQFVRR|ME 0.147 . NCLIV_042710 673 EGSESEK|QT 0.069 . NCLIV_042710 682 PENAGQK|MD 0.072 . NCLIV_042710 686 GQKMDEK|KE 0.061 . NCLIV_042710 687 QKMDEKK|EE 0.099 . NCLIV_042710 690 DEKKEEK|NA 0.068 . NCLIV_042710 693 KEEKNAK|EK 0.082 . NCLIV_042710 695 EKNAKEK|ED 0.079 . NCLIV_042710 701 KEDEDVR|MK 0.078 . NCLIV_042710 703 DEDVRMK|DG 0.065 . NCLIV_042710 707 RMKDGTR|VG 0.068 . NCLIV_042710 711 GTRVGLK|KN 0.067 . NCLIV_042710 712 TRVGLKK|ND 0.091 . NCLIV_042710 733 DGTVFFR|EM 0.098 . NCLIV_042710 737 FFREMER|VN 0.068 . NCLIV_042710 747 SHTISSK|FI 0.091 . NCLIV_042710 754 FIGDTLR|AT 0.071 . NCLIV_042710 759 LRATVLR|KK 0.117 . NCLIV_042710 760 RATVLRK|KE 0.064 . NCLIV_042710 761 ATVLRKK|EV 0.108 . NCLIV_042710 779 ENALVPK|HQ 0.073 . NCLIV_042710 785 KHQWDQK|AR 0.064 . NCLIV_042710 787 QWDQKAR|YL 0.156 . NCLIV_042710 805 LTLEYLK|DE 0.061 . NCLIV_042710 811 KDEFGAK|FS 0.076 . NCLIV_042710 815 GAKFSER|AP 0.090 . NCLIV_042710 854 TSGYTFR|NC 0.079 . NCLIV_042710 865 THVDGQK|VL 0.059 . NCLIV_042710 870 QKVLNMK|HL 0.073 . NCLIV_042710 874 NMKHLAK|LL 0.078 . NCLIV_042710 903 TSGVSEK|KE 0.067 . NCLIV_042710 904 SGVSEKK|EE 0.127 . NCLIV_042710 908 EKKEEEK|SE 0.074 . NCLIV_042710 921 IFLLENK|VQ 0.052 . NCLIV_042710 928 VQLVLER|SK 0.104 . NCLIV_042710 930 LVLERSK|AE 0.056 . NCLIV_042710 940 MQPFILK|QH 0.061 . ____________________________^_________________

Fasta :-
>NCLIV_042710 ATGATCGAGAGCTGCCACCTTACGGCCTTTCCAGATTTCTCTCCTTGGCGTTTTCTTCTA GCTCTCACCTTTGCGTCTCGCAGCTCCTGCTGCCTTCGCCCGCAACGCTGTGTGGGCGGC GCTATCCTCCCACGCACTTGTTTTGCACGACGAAATACTTCCTTGTTCTCGCGCTTCTTC TCTTTCCTCGTCTTCTTTCTTAGTGCAGTTCTCATCTGCGGCACCCCTGTTCCTTCTTCT GCTCGTCCCTCTCCTCTTCTTCCCCTTCTCGCTTTCCTCGCGCACTCCTCGATTCACCAC CCCTCCTCTTCGCCCTCGCTCCTCTTGTCGCTCTCCCTCTCTCTCCAACGCTCTCCGCTC TCGTCTTCCGCTTCTCCGCCGCGTCCTTCCCCTCTTTCTGCCCGGCCTTTTGTTTCTTCC AGTCGCGCTTCCGCTTCTCGGCCTTCGGCTGCGCAACTGCGTCGGGTGTATATACACCGC GCAGGCGCCTCAGGAGTCGCGCCTGTGTCCGTCTCGCGTGCGCGACAGCCCCCGTCTTTT CGTGCAAGCACAATGGCGTCGGCCTTGTCGACACGCCTCAGCTTCTTAGGCAGGCCTTTC TCAGGAGCAGCTTCGCCGCTGCGAGGAGAGACCGCTAGCCTGGAGATGGAGCATGCATCC CTCTGTCGTCCTTCGAAGACTCTCTTGCCTCGTCTCCAAATCGCCGCTGGTTCCAGCCTC CGGCGAGGCGGAGACTTCCTTGCGCAACGCCCACTTTCGCCGTTCCTTCCTGTGAGCGAA ACGCGTGCGAGAGGCGCCTTCCTGTCGAAAAGATTTTTCTCGTCCTCCCTTCTCTCGCCA GCTCTCGCCACGCGCTCCCATAACAGCCTCACCCCTGCCCCTCCCACCTTTTTCTCTCGC CGCTGTCTCTCTTCTTCTCTCTCTCCCCTTTCTTCTCTCTCTTCCCTCTCTTCTCTCTCT TCGCTCTCTCCCCTTTCTCCGCTTTGCTCAGGGGCGTCTCGGTCCAGTCGTCGCGCCGCA TCGGCTCGGTTCTCCTCCTCTGCGTCCTTCCCCGTCCAAAGCCATCTCGAGGGCGACGTG CTCCCTGAGCCTCCTGCGGGTGTATATACACCTGAGGGCCTCGGCGACGAGGGCGGTTTC GCGCGCGGGCCAGGAGTGTCTGACGCGTTCTTCGCGCCGGCCGGCGATCTGGCCTCGCCG GCGTCCATGAGTTTCCTCTTCAACAGCGTGGTGAAAGTCTACAGCGACTTCACAGATCCA AACTACTCACTTCCCTGGCAGATGCAGAGGCAAGGCACGAGCACGGGAAGCGGTTTTGTC CTCAGAGATCGCCTCATCATGACCAACGCCCACTGCGTGTCCTGGAACAACCGGCTGCAA GTCAGAAAACACGGGTCCCCAAACAAGTTTGTGGCGAGGATCGTGGCGGTGGGGCACGAA TGCGACTTGGCGCTCATCACCGTCGACGACGAGGCGTTCTGGCAAGGCGACTTGGCCCAA CTGGAATTCGGCGATGTGCCTGCGCTCCAAGACGCAGTGGTTGTCTTGGGCTATCCGCGG GGAGGAGACAATCTGTGCATCACCTCCGGCGTTGTGAGCCGCGTGGACGTGAACCCCTAC GCGCACTCAAACACCTGTCTCCTGTGCGTGCAGATTGACGCCGCCATCAATCCGGGAAAC AGTGGTGGCCCAGCTCTGAAAGACGGACGCGTCGTCGGCGTGGCCTTCCAAGGCTTCGAC AACGCCCAGAACATTGGATACATCGTCCCCACCACTGTCATTCGACACTTCCTCGACGAC GTGAAAAGACACAACGGTGTCTACACCGGGTTTCCGTCTGCGGGAATTGTGTTCCAACAC CTCGAGAACAAAAGCATGCAAACCTTTCTAGGCATTGACAAAATCAAACCGGAACAGCTG CCACCAGGAGTCGAACCTTCCGGAATTTTAGTGACGATGGCTGACGAGCTCCGCGCGGGC CAATTCGTGCGCCGCATGGAAGGCTCAGAGTCTGAAAAGCAAACGCCGGAGAATGCGGGA CAGAAAATGGACGAGAAGAAGGAAGAGAAGAACGCGAAGGAAAAGGAGGACGAAGACGTT CGCATGAAAGACGGCACGCGAGTTGGGTTGAAGAAAAACGACGTCATTCTTGCGATTGAT GGAGTCGACGTAGCCAACGATGGGACTGTCTTCTTCCGAGAGATGGAACGGGTCAACGTC TCCCACACAATTTCTTCCAAATTCATCGGCGACACTCTCCGAGCGACTGTCCTGAGAAAG AAGGAGGTTGTCGATGTCGTTATTCCTCTCATCGAGGAGAACGCGCTGGTGCCGAAGCAT CAGTGGGACCAGAAAGCGCGCTATCTGATCTACGGCGGCCTCGTCTTCTGTCCCCTCACC CTCGAGTATTTGAAAGACGAGTTTGGAGCAAAATTCAGCGAACGAGCTCCTGCGTCGCTC CTCCAACCCCTCGCCGACATCTTTGCGACGGAAGAAGGCGAAGAGCCTGTCATCCTCAGC CACATTCTCGCGTCAGACCTGACCAGCGGATACACCTTCCGCAATTGCCTCCTCACCCAC GTGGACGGTCAGAAAGTTCTCAACATGAAACATCTCGCAAAACTCCTCGGCATGCCTCTG CCCTCTTCTTCTTCGGCTCCTTCTTCTCCCTCCACTTCTTCTCTTTCTACTTCCGGTGTG TCTGAGAAGAAAGAAGAGGAGAAAAGCGAGAACGACTTTGTGATTTTCCTCTTGGAGAAC AAGGTCCAGTTGGTCTTGGAGCGATCGAAAGCCGAGGCGATGCAGCCGTTCATTCTCAAG CAGCACGCGATTCATTCGCCGACGAGCGAGGTTCTGTAG
Download Fasta

Fasta :-

MIESCHLTAFPDFSPWRFLLALTFASRSSCCLRPQRCVGGAILPRTCFARRNTSLFSRFF SFLVFFLSAVLICGTPVPSSARPSPLLPLLAFLAHSSIHHPSSSPSLLLSLSLSLQRSPL SSSASPPRPSPLSARPFVSSSRASASRPSAAQLRRVYIHRAGASGVAPVSVSRARQPPSF RASTMASALSTRLSFLGRPFSGAASPLRGETASLEMEHASLCRPSKTLLPRLQIAAGSSL RRGGDFLAQRPLSPFLPVSETRARGAFLSKRFFSSSLLSPALATRSHNSLTPAPPTFFSR RCLSSSLSPLSSLSSLSSLSSLSPLSPLCSGASRSSRRAASARFSSSASFPVQSHLEGDV LPEPPAGVYTPEGLGDEGGFARGPGVSDAFFAPAGDLASPASMSFLFNSVVKVYSDFTDP NYSLPWQMQRQGTSTGSGFVLRDRLIMTNAHCVSWNNRLQVRKHGSPNKFVARIVAVGHE CDLALITVDDEAFWQGDLAQLEFGDVPALQDAVVVLGYPRGGDNLCITSGVVSRVDVNPY AHSNTCLLCVQIDAAINPGNSGGPALKDGRVVGVAFQGFDNAQNIGYIVPTTVIRHFLDD VKRHNGVYTGFPSAGIVFQHLENKSMQTFLGIDKIKPEQLPPGVEPSGILVTMADELRAG QFVRRMEGSESEKQTPENAGQKMDEKKEEKNAKEKEDEDVRMKDGTRVGLKKNDVILAID GVDVANDGTVFFREMERVNVSHTISSKFIGDTLRATVLRKKEVVDVVIPLIEENALVPKH QWDQKARYLIYGGLVFCPLTLEYLKDEFGAKFSERAPASLLQPLADIFATEEGEEPVILS HILASDLTSGYTFRNCLLTHVDGQKVLNMKHLAKLLGMPLPSSSSAPSSPSTSSLSTSGV SEKKEEEKSENDFVIFLLENKVQLVLERSKAEAMQPFILKQHAIHSPTSEVL

Prokaryotic proteases

No Results

	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method
	NCLIV_042710	144 S	SSRASASRP	0.997	unsp	NCLIV_042710	144 S	SSRASASRP	0.997	unsp	NCLIV_042710	144 S	SSRASASRP	0.997	unsp	NCLIV_042710	205 S	SGAASPLRG	0.991	unsp	NCLIV_042710	253 S	QRPLSPFLP	0.99	unsp	NCLIV_042710	336 S	ASRSSRRAA	0.997	unsp	NCLIV_042710	341 S	RRAASARFS	0.995	unsp	NCLIV_042710	345 S	SARFSSSAS	0.992	unsp	NCLIV_042710	671 S	EGSESEKQT	0.996	unsp	NCLIV_042710	889 S	SAPSSPSTS	0.991	unsp	NCLIV_042710	901 S	TSGVSEKKE	0.996	unsp	NCLIV_042710	909 S	EEEKSENDF	0.995	unsp	NCLIV_042710	80 S	PVPSSARPS	0.99	unsp	NCLIV_042710	130 S	PPRPSPLSA	0.994	unsp

NCLIV_042710 | peptidase S1, chymotrypsin:PDZ/DHR/GLGF domain (Precursor), related

ID's

UniProt_ID: F0VC70

GEO Functions

Computed_GO_Component_IDs:

Computed_GO_Components:

Computed_GO_Function_IDs:

Computed_GO_Functions:

Computed_GO_Process_IDs:

Computed_GO_Processes:

Curated_GO_Component_IDs:

Curated_GO_Components:

Curated_GO_Function_IDs:

Curated_GO_Functions:

Curated_GO_Processes:

Subcellular Localization

Targetp

Signalp

Fasta :-

Mitoprot

ProPeptide Prediction

Sequence

Nucleotide sequence

Fasta :-

Protein sequence

Fasta :-

Domains

Prokaryotic proteases

Structure

Post Translational Modifications

N_Linked Glycosylation

O_Linked Glycosylation

Phosphorylation

Protein-Protein Interaction

String

Literature

PubMed

Google Scholar

Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India