NCLIV_044210 | hypothetical protein

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0005515      

  • Computed_GO_Functions:  protein binding      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
NCLIV_044210OTHER0.9988840.0002020.000914
No Results

  • Fasta :-

    >NCLIV_044210 MSHLKQRLKINVLCVEGLDGAGLSANQGCYVKFRWRGEKYKTEPKKREGSRMQFAFTAIL PFESDVDPNSLVVQLWSTSTFSHKKIAETTVDLTKAPTTGSAQFSFPLVPEGRRLGAAPV LVLALQAQSFDQAASNAELQRRLQQHADEQRKKREFERQQTVLEQRLLAGRPPPSVSSPP PYAAPGYAPSPPPCAGYGPTCPTAPSPPTQAHPAAPGAYPNYPYYPGAPSGAPPNAGGVA NALPQPQAYPAYTPNAGFPAPHAPYSAAQSAPGHAYPPQYGWATPQQPVCVPVLPQAPPP QQQQASVTPSGHWDEEAIKYIKNILPQCSRKEIEGALSEAGGDREKAVDILLKRLVAHSA EENENQVHELEHQMLVFLEREGRRKALLIGINYRATRAELRGCVNDVYRMRTLLCAVYGF HDSSTTLVALTDDNPNSLYRPTRNNILKAMRWLTIDNRPGDSLFFHYSGHGGRQIDRSGI EEDGYDETILPVDFDTAGQILDDELHAFLVQPLQSGCRLTAVMDCCHSGTGLDLPFTWNT PKWRWEEETNPFYVLGDVQMFSGCQDDQTSADLAGHEDRAPGGAMTTAFIAVLTLRPFGH SYPSLMQGLTDSMVARGLSQRPQLTSSQKFDFNRPFNLADVIPNQNKVLGRQIRRRRKAL PAGAEARGRPGAGIGDVMLLAGAGLATGLLVGSLLND
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NCLIV_044210.fa Sequence name : NCLIV_044210 Sequence length : 697 VALUES OF COMPUTED PARAMETERS Coef20 : 3.618 CoefTot : -0.141 ChDiff : -1 ZoneTo : 15 KR : 3 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.965 1.947 0.372 0.726 MesoH : 0.239 0.264 -0.189 0.232 MuHd_075 : 18.917 17.613 6.549 4.515 MuHd_095 : 3.210 7.106 2.611 1.415 MuHd_100 : 12.910 14.439 5.341 3.052 MuHd_105 : 18.804 17.023 7.068 3.807 Hmax_075 : 11.800 16.100 1.519 5.580 Hmax_095 : 4.550 10.900 0.053 3.520 Hmax_100 : 12.200 18.200 1.459 5.360 Hmax_105 : -0.613 10.500 -0.179 1.794 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9803 0.0197 DFMC : 0.9554 0.0446
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 697 NCLIV_044210 MSHLKQRLKINVLCVEGLDGAGLSANQGCYVKFRWRGEKYKTEPKKREGSRMQFAFTAILPFESDVDPNSLVVQLWSTST 80 FSHKKIAETTVDLTKAPTTGSAQFSFPLVPEGRRLGAAPVLVLALQAQSFDQAASNAELQRRLQQHADEQRKKREFERQQ 160 TVLEQRLLAGRPPPSVSSPPPYAAPGYAPSPPPCAGYGPTCPTAPSPPTQAHPAAPGAYPNYPYYPGAPSGAPPNAGGVA 240 NALPQPQAYPAYTPNAGFPAPHAPYSAAQSAPGHAYPPQYGWATPQQPVCVPVLPQAPPPQQQQASVTPSGHWDEEAIKY 320 IKNILPQCSRKEIEGALSEAGGDREKAVDILLKRLVAHSAEENENQVHELEHQMLVFLEREGRRKALLIGINYRATRAEL 400 RGCVNDVYRMRTLLCAVYGFHDSSTTLVALTDDNPNSLYRPTRNNILKAMRWLTIDNRPGDSLFFHYSGHGGRQIDRSGI 480 EEDGYDETILPVDFDTAGQILDDELHAFLVQPLQSGCRLTAVMDCCHSGTGLDLPFTWNTPKWRWEEETNPFYVLGDVQM 560 FSGCQDDQTSADLAGHEDRAPGGAMTTAFIAVLTLRPFGHSYPSLMQGLTDSMVARGLSQRPQLTSSQKFDFNRPFNLAD 640 VIPNQNKVLGRQIRRRRKALPAGAEARGRPGAGIGDVMLLAGAGLATGLLVGSLLND 720 ................................................................................ 80 .........................................................................P...... 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................P........................................ 720 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 2 Name Pos Context Score Pred ____________________________v_________________ NCLIV_044210 5 --MSHLK|QR 0.058 . NCLIV_044210 7 MSHLKQR|LK 0.121 . NCLIV_044210 9 HLKQRLK|IN 0.059 . NCLIV_044210 32 NQGCYVK|FR 0.066 . NCLIV_044210 34 GCYVKFR|WR 0.162 . NCLIV_044210 36 YVKFRWR|GE 0.075 . NCLIV_044210 39 FRWRGEK|YK 0.122 . NCLIV_044210 41 WRGEKYK|TE 0.076 . NCLIV_044210 45 KYKTEPK|KR 0.065 . NCLIV_044210 46 YKTEPKK|RE 0.099 . NCLIV_044210 47 KTEPKKR|EG 0.277 . NCLIV_044210 51 KKREGSR|MQ 0.103 . NCLIV_044210 84 TSTFSHK|KI 0.068 . NCLIV_044210 85 STFSHKK|IA 0.130 . NCLIV_044210 95 TTVDLTK|AP 0.065 . NCLIV_044210 113 PLVPEGR|RL 0.106 . NCLIV_044210 114 LVPEGRR|LG 0.073 . NCLIV_044210 141 SNAELQR|RL 0.097 . NCLIV_044210 142 NAELQRR|LQ 0.118 . NCLIV_044210 151 QHADEQR|KK 0.101 . NCLIV_044210 152 HADEQRK|KR 0.082 . NCLIV_044210 153 ADEQRKK|RE 0.101 . NCLIV_044210 154 DEQRKKR|EF 0.761 *ProP* NCLIV_044210 158 KKREFER|QQ 0.104 . NCLIV_044210 166 QTVLEQR|LL 0.073 . NCLIV_044210 171 QRLLAGR|PP 0.068 . NCLIV_044210 319 WDEEAIK|YI 0.076 . NCLIV_044210 322 EAIKYIK|NI 0.057 . NCLIV_044210 330 ILPQCSR|KE 0.070 . NCLIV_044210 331 LPQCSRK|EI 0.148 . NCLIV_044210 344 SEAGGDR|EK 0.077 . NCLIV_044210 346 AGGDREK|AV 0.077 . NCLIV_044210 353 AVDILLK|RL 0.055 . NCLIV_044210 354 VDILLKR|LV 0.160 . NCLIV_044210 380 MLVFLER|EG 0.078 . NCLIV_044210 383 FLEREGR|RK 0.124 . NCLIV_044210 384 LEREGRR|KA 0.115 . NCLIV_044210 385 EREGRRK|AL 0.096 . NCLIV_044210 394 LIGINYR|AT 0.117 . NCLIV_044210 397 INYRATR|AE 0.187 . NCLIV_044210 401 ATRAELR|GC 0.075 . NCLIV_044210 409 CVNDVYR|MR 0.075 . NCLIV_044210 411 NDVYRMR|TL 0.088 . NCLIV_044210 440 NPNSLYR|PT 0.095 . NCLIV_044210 443 SLYRPTR|NN 0.230 . NCLIV_044210 448 TRNNILK|AM 0.077 . NCLIV_044210 451 NILKAMR|WL 0.078 . NCLIV_044210 458 WLTIDNR|PG 0.075 . NCLIV_044210 473 YSGHGGR|QI 0.138 . NCLIV_044210 477 GGRQIDR|SG 0.108 . NCLIV_044210 518 PLQSGCR|LT 0.074 . NCLIV_044210 542 FTWNTPK|WR 0.066 . NCLIV_044210 544 WNTPKWR|WE 0.099 . NCLIV_044210 579 LAGHEDR|AP 0.141 . NCLIV_044210 596 IAVLTLR|PF 0.105 . NCLIV_044210 616 TDSMVAR|GL 0.210 . NCLIV_044210 621 ARGLSQR|PQ 0.083 . NCLIV_044210 629 QLTSSQK|FD 0.063 . NCLIV_044210 634 QKFDFNR|PF 0.089 . NCLIV_044210 647 VIPNQNK|VL 0.067 . NCLIV_044210 651 QNKVLGR|QI 0.114 . NCLIV_044210 654 VLGRQIR|RR 0.277 . NCLIV_044210 655 LGRQIRR|RR 0.095 . NCLIV_044210 656 GRQIRRR|RK 0.123 . NCLIV_044210 657 RQIRRRR|KA 0.540 *ProP* NCLIV_044210 658 QIRRRRK|AL 0.301 . NCLIV_044210 667 PAGAEAR|GR 0.106 . NCLIV_044210 669 GAEARGR|PG 0.109 . ____________________________^_________________

  • Fasta :-

    >NCLIV_044210 ATGTCGCATCTCAAACAGCGTCTGAAAATCAACGTCTTGTGCGTCGAAGGTCTTGACGGC GCGGGGCTCAGCGCCAACCAAGGCTGCTACGTAAAGTTCCGCTGGCGGGGCGAAAAATAC AAAACGGAGCCGAAGAAACGCGAAGGCAGCCGTATGCAGTTTGCCTTCACCGCCATCCTC CCCTTCGAGAGCGACGTAGACCCCAACTCCCTCGTCGTCCAGCTTTGGTCCACCTCCACG TTCTCCCACAAAAAGATTGCCGAGACAACCGTCGACTTGACAAAGGCCCCAACGACAGGC AGCGCTCAGTTCTCCTTTCCCCTGGTTCCTGAAGGTCGGCGTCTCGGCGCGGCTCCAGTC CTCGTTCTGGCGCTGCAGGCGCAAAGTTTCGACCAGGCGGCGAGCAACGCCGAGCTCCAG CGCCGGCTGCAGCAACACGCAGACGAGCAGCGGAAGAAACGGGAATTCGAGCGACAGCAA ACAGTGCTGGAGCAGCGACTCCTGGCTGGCCGGCCGCCTCCGTCTGTCTCTTCCCCGCCG CCGTACGCAGCGCCTGGCTACGCGCCGTCCCCCCCGCCCTGCGCCGGGTACGGTCCCACC TGCCCCACAGCCCCGTCGCCGCCGACGCAGGCGCATCCGGCGGCTCCAGGGGCGTACCCG AACTACCCGTACTACCCTGGCGCGCCCTCGGGCGCTCCCCCGAATGCAGGAGGCGTCGCC AACGCCTTGCCGCAGCCGCAGGCCTACCCGGCGTACACGCCGAACGCGGGGTTTCCAGCG CCTCACGCGCCGTACAGCGCGGCGCAAAGCGCACCCGGACACGCCTACCCTCCTCAGTAC GGATGGGCAACTCCGCAACAGCCCGTGTGCGTGCCTGTGCTCCCGCAGGCCCCGCCGCCT CAGCAGCAACAGGCTTCGGTGACGCCGTCGGGGCACTGGGACGAGGAGGCGATCAAGTAT ATAAAAAACATCCTCCCGCAGTGTTCCCGAAAAGAAATTGAAGGGGCCTTGTCCGAGGCA GGCGGCGACAGGGAGAAAGCTGTTGACATTCTCCTGAAGCGTTTGGTGGCGCATTCAGCG GAGGAAAATGAGAACCAAGTACACGAGCTCGAGCACCAGATGTTAGTTTTTTTAGAGCGG GAAGGTCGCCGAAAGGCTCTGCTGATTGGCATTAACTACCGAGCGACGCGGGCGGAACTC CGCGGCTGCGTGAACGACGTTTACCGGATGAGAACTTTGCTCTGCGCGGTTTACGGTTTC CACGACTCCTCAACGACTCTCGTGGCGCTTACAGACGACAACCCAAACAGCCTGTACCGC CCTACCCGCAACAACATCCTAAAGGCGATGCGATGGCTGACGATCGATAACCGACCAGGC GACTCTCTTTTTTTCCATTACTCTGGACATGGCGGGAGACAAATCGATCGGAGCGGCATT GAAGAAGACGGCTACGACGAAACGATTCTTCCTGTCGATTTCGACACTGCGGGACAAATC CTCGACGACGAGCTGCACGCGTTTCTGGTCCAACCGCTGCAGAGCGGCTGCAGGCTGACG GCTGTGATGGATTGTTGCCATAGCGGCACTGGCCTCGACCTCCCCTTCACCTGGAACACT CCCAAGTGGCGGTGGGAAGAAGAAACGAATCCGTTCTACGTCCTCGGAGACGTCCAGATG TTTTCCGGGTGCCAAGACGACCAGACTTCCGCAGACTTGGCTGGCCACGAAGACCGCGCG CCGGGAGGTGCGATGACCACGGCGTTCATTGCCGTGCTGACTCTCAGGCCCTTTGGCCAT TCTTACCCCTCTTTAATGCAGGGACTCACCGACAGCATGGTCGCCCGAGGCTTGTCGCAG CGGCCCCAACTGACGTCGTCTCAGAAATTCGACTTCAACAGGCCCTTCAACCTGGCGGAC GTCATCCCAAACCAGAACAAAGTGCTCGGGAGACAGATTCGCCGCCGTCGGAAGGCGCTG CCTGCCGGCGCAGAGGCCCGCGGCAGACCGGGCGCCGGCATCGGCGACGTCATGCTTCTA GCCGGAGCCGGCTTGGCGACGGGGCTCCTGGTCGGCTCGCTGCTGAACGACTGA
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  • Fasta :-

    MSHLKQRLKINVLCVEGLDGAGLSANQGCYVKFRWRGEKYKTEPKKREGSRMQFAFTAIL PFESDVDPNSLVVQLWSTSTFSHKKIAETTVDLTKAPTTGSAQFSFPLVPEGRRLGAAPV LVLALQAQSFDQAASNAELQRRLQQHADEQRKKREFERQQTVLEQRLLAGRPPPSVSSPP PYAAPGYAPSPPPCAGYGPTCPTAPSPPTQAHPAAPGAYPNYPYYPGAPSGAPPNAGGVA NALPQPQAYPAYTPNAGFPAPHAPYSAAQSAPGHAYPPQYGWATPQQPVCVPVLPQAPPP QQQQASVTPSGHWDEEAIKYIKNILPQCSRKEIEGALSEAGGDREKAVDILLKRLVAHSA EENENQVHELEHQMLVFLEREGRRKALLIGINYRATRAELRGCVNDVYRMRTLLCAVYGF HDSSTTLVALTDDNPNSLYRPTRNNILKAMRWLTIDNRPGDSLFFHYSGHGGRQIDRSGI EEDGYDETILPVDFDTAGQILDDELHAFLVQPLQSGCRLTAVMDCCHSGTGLDLPFTWNT PKWRWEEETNPFYVLGDVQMFSGCQDDQTSADLAGHEDRAPGGAMTTAFIAVLTLRPFGH SYPSLMQGLTDSMVARGLSQRPQLTSSQKFDFNRPFNLADVIPNQNKVLGRQIRRRRKAL PAGAEARGRPGAGIGDVMLLAGAGLATGLLVGSLLND

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
NCLIV_044210478 SQIDRSGIEE0.996unspNCLIV_044210478 SQIDRSGIEE0.996unspNCLIV_044210478 SQIDRSGIEE0.996unspNCLIV_044210329 SLPQCSRKEI0.993unspNCLIV_044210359 SLVAHSAEEN0.998unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India