NCLIV_044300 | conserved hypothetical protein

  • Computed_GO_Component_IDs:  GO:0016020      

  • Computed_GO_Components:  membrane      

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
NCLIV_044300OTHER0.9999950.0000000.000005
No Results

  • Fasta :-

    >NCLIV_044300 MAETRSNTMEERQVQGQPQHLPTNLDQWSKLPASPTARRGWRPPSLSPQRLGTSARPTAA PSTDGEAGPRTPSTPGEGQVATQYAPLSPPSSPAFSGSGSWLTFLVPTASVSLSVPVLLV VGFAPFFCMILFIVGLHNVLLAMLMMHWLCMVLVPLLYIYVVERSFDYYRHVWKIQRCRF RRQWPWAGACCLLALGGLYAAFVCAKAVGGSWFAGVLEGARVNCLSEGLALPSPLLLLAG IYFFLVNPIVEEWFWRVFLYREFGGAVFVSAPNGVLYMRESDPLLLSWCIQSRDAADASA NVGSTAVAIPLTSDDPSRPASLALSPSRLRSAFQEPQASGQFLTAATMERAIAATAVEQG PSEPLGQTEKDDRGGGRQKQATTPENESLSGLRPRGVSGCSETETGQKAASGDTPVSPAS ACVGTQCADVGRRIHYLGESCGFVPADASGSAGLPRADCLTDHAETEGTRRGELRILPET IDEEDPETCPSPTAPVMTHVAPGVLQVDVRLSAAGQAMLSFFYASYHAVVFSTTVGLVYG FVALPCVAALGLLLTFFRNSSRFGILSGVFTHVGVDAAVVAILADVLQFL
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NCLIV_044300.fa Sequence name : NCLIV_044300 Sequence length : 590 VALUES OF COMPUTED PARAMETERS Coef20 : 3.264 CoefTot : 0.141 ChDiff : -7 ZoneTo : 2 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.647 2.847 0.607 0.962 MesoH : 1.838 1.780 0.236 0.680 MuHd_075 : 14.453 10.002 4.026 2.306 MuHd_095 : 8.606 6.212 2.431 2.470 MuHd_100 : 4.435 3.899 2.339 1.976 MuHd_105 : 1.555 2.394 1.747 1.923 Hmax_075 : 4.783 -0.467 -1.836 1.062 Hmax_095 : -7.350 -4.375 -4.826 -0.122 Hmax_100 : -9.800 -4.500 -4.882 -0.880 Hmax_105 : -4.800 -3.900 -4.190 0.240 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9841 0.0159 DFMC : 0.9765 0.0235
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 590 NCLIV_044300 MAETRSNTMEERQVQGQPQHLPTNLDQWSKLPASPTARRGWRPPSLSPQRLGTSARPTAAPSTDGEAGPRTPSTPGEGQV 80 ATQYAPLSPPSSPAFSGSGSWLTFLVPTASVSLSVPVLLVVGFAPFFCMILFIVGLHNVLLAMLMMHWLCMVLVPLLYIY 160 VVERSFDYYRHVWKIQRCRFRRQWPWAGACCLLALGGLYAAFVCAKAVGGSWFAGVLEGARVNCLSEGLALPSPLLLLAG 240 IYFFLVNPIVEEWFWRVFLYREFGGAVFVSAPNGVLYMRESDPLLLSWCIQSRDAADASANVGSTAVAIPLTSDDPSRPA 320 SLALSPSRLRSAFQEPQASGQFLTAATMERAIAATAVEQGPSEPLGQTEKDDRGGGRQKQATTPENESLSGLRPRGVSGC 400 SETETGQKAASGDTPVSPASACVGTQCADVGRRIHYLGESCGFVPADASGSAGLPRADCLTDHAETEGTRRGELRILPET 480 IDEEDPETCPSPTAPVMTHVAPGVLQVDVRLSAAGQAMLSFFYASYHAVVFSTTVGLVYGFVALPCVAALGLLLTFFRNS 560 SRFGILSGVFTHVGVDAAVVAILADVLQFL 640 ................................................................................ 80 ................................................................................ 160 .....................P.......................................................... 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 .............................. 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ NCLIV_044300 5 --MAETR|SN 0.171 . NCLIV_044300 12 SNTMEER|QV 0.147 . NCLIV_044300 30 NLDQWSK|LP 0.051 . NCLIV_044300 38 PASPTAR|RG 0.082 . NCLIV_044300 39 ASPTARR|GW 0.118 . NCLIV_044300 42 TARRGWR|PP 0.248 . NCLIV_044300 50 PSLSPQR|LG 0.079 . NCLIV_044300 56 RLGTSAR|PT 0.102 . NCLIV_044300 70 DGEAGPR|TP 0.078 . NCLIV_044300 164 YIYVVER|SF 0.152 . NCLIV_044300 170 RSFDYYR|HV 0.175 . NCLIV_044300 174 YYRHVWK|IQ 0.062 . NCLIV_044300 177 HVWKIQR|CR 0.073 . NCLIV_044300 179 WKIQRCR|FR 0.101 . NCLIV_044300 181 IQRCRFR|RQ 0.094 . NCLIV_044300 182 QRCRFRR|QW 0.635 *ProP* NCLIV_044300 206 AAFVCAK|AV 0.111 . NCLIV_044300 221 GVLEGAR|VN 0.070 . NCLIV_044300 256 VEEWFWR|VF 0.079 . NCLIV_044300 261 WRVFLYR|EF 0.155 . NCLIV_044300 279 NGVLYMR|ES 0.088 . NCLIV_044300 293 SWCIQSR|DA 0.136 . NCLIV_044300 318 TSDDPSR|PA 0.130 . NCLIV_044300 328 LALSPSR|LR 0.080 . NCLIV_044300 330 LSPSRLR|SA 0.148 . NCLIV_044300 350 TAATMER|AI 0.099 . NCLIV_044300 370 PLGQTEK|DD 0.077 . NCLIV_044300 373 QTEKDDR|GG 0.096 . NCLIV_044300 377 DDRGGGR|QK 0.095 . NCLIV_044300 379 RGGGRQK|QA 0.075 . NCLIV_044300 393 ESLSGLR|PR 0.085 . NCLIV_044300 395 LSGLRPR|GV 0.215 . NCLIV_044300 408 ETETGQK|AA 0.067 . NCLIV_044300 432 QCADVGR|RI 0.108 . NCLIV_044300 433 CADVGRR|IH 0.117 . NCLIV_044300 456 GSAGLPR|AD 0.106 . NCLIV_044300 470 AETEGTR|RG 0.062 . NCLIV_044300 471 ETEGTRR|GE 0.114 . NCLIV_044300 475 TRRGELR|IL 0.134 . NCLIV_044300 510 VLQVDVR|LS 0.106 . NCLIV_044300 558 LLLTFFR|NS 0.083 . NCLIV_044300 562 FFRNSSR|FG 0.085 . ____________________________^_________________

  • Fasta :-

    >NCLIV_044300 ATGGCGGAAACCAGATCCAACACGATGGAGGAACGCCAAGTCCAGGGTCAACCTCAGCAC TTGCCCACAAATCTAGACCAATGGAGCAAGCTGCCAGCTTCGCCCACAGCGCGGCGCGGA TGGCGCCCCCCGTCTCTCTCCCCGCAGCGGCTCGGCACGTCGGCGCGTCCGACTGCTGCT CCGTCGACTGATGGCGAGGCAGGGCCTCGGACGCCGTCCACTCCAGGAGAGGGACAGGTG GCCACCCAGTATGCCCCTCTTTCTCCTCCGTCCTCCCCGGCGTTCTCGGGCTCCGGCTCC TGGCTGACTTTTCTCGTCCCAACCGCGTCGGTCTCTCTCTCTGTCCCCGTTTTGCTCGTT GTTGGATTTGCACCCTTCTTCTGCATGATCCTGTTCATCGTGGGACTTCACAACGTCCTG CTGGCCATGCTCATGATGCACTGGCTGTGCATGGTGCTCGTCCCGCTCCTGTATATTTAC GTGGTGGAGCGTTCATTCGATTATTATCGACATGTGTGGAAAATTCAGCGTTGTCGGTTT CGACGCCAGTGGCCCTGGGCAGGCGCCTGCTGTCTCCTCGCCCTCGGCGGGCTGTACGCC GCCTTTGTGTGTGCGAAGGCTGTGGGCGGATCCTGGTTTGCCGGCGTCCTGGAAGGCGCG CGCGTCAATTGTCTGTCTGAAGGCCTCGCCCTTCCGTCTCCGCTTCTCCTCCTCGCAGGT ATTTACTTCTTTCTCGTCAATCCTATCGTCGAAGAATGGTTTTGGCGAGTCTTTCTCTAC CGTGAATTCGGCGGCGCCGTCTTTGTCTCGGCCCCAAATGGTGTCCTCTACATGCGCGAG TCAGACCCTCTCCTGCTGTCCTGGTGCATCCAGTCGCGCGACGCGGCAGACGCCTCAGCG AACGTCGGATCCACGGCTGTGGCGATCCCCCTGACGTCTGATGATCCGTCTCGCCCGGCC TCGCTCGCTCTGTCTCCTTCCCGGCTCCGCTCCGCTTTCCAGGAGCCGCAGGCTTCTGGA CAGTTCCTCACCGCCGCGACCATGGAGCGGGCGATCGCGGCAACCGCAGTCGAACAGGGC CCAAGCGAGCCTCTGGGGCAGACGGAGAAGGACGACAGGGGGGGCGGCCGCCAGAAGCAG GCAACGACGCCAGAGAACGAATCTCTCTCTGGCCTGCGCCCGCGGGGAGTGAGTGGTTGC AGCGAGACGGAAACGGGCCAGAAAGCGGCCTCGGGAGACACCCCCGTTTCGCCTGCTTCC GCGTGCGTTGGGACGCAGTGTGCAGACGTCGGGAGACGCATACATTATTTAGGCGAAAGC TGTGGGTTCGTGCCTGCAGACGCGTCTGGGAGTGCGGGGCTCCCGCGGGCAGACTGCCTC ACCGATCACGCAGAGACGGAAGGAACCCGGCGAGGAGAGCTACGGATTTTGCCGGAGACG ATCGACGAAGAAGATCCGGAAACATGTCCCTCGCCCACGGCTCCGGTCATGACACACGTC GCACCTGGCGTCCTGCAAGTCGACGTGCGTCTCTCCGCCGCCGGCCAAGCCATGCTTTCG TTCTTTTACGCTTCGTACCATGCCGTCGTCTTCAGCACAACTGTCGGCTTAGTGTACGGT TTTGTCGCTCTTCCCTGTGTTGCGGCGCTCGGCCTCCTCCTCACGTTTTTCCGCAATAGC AGTCGCTTTGGCATTCTTTCCGGCGTCTTCACTCACGTCGGTGTCGACGCCGCGGTCGTC GCGATTCTCGCCGATGTCCTTCAGTTCCTCTGA
  • Download Fasta

  • Fasta :-

    MAETRSNTMEERQVQGQPQHLPTNLDQWSKLPASPTARRGWRPPSLSPQRLGTSARPTAA PSTDGEAGPRTPSTPGEGQVATQYAPLSPPSSPAFSGSGSWLTFLVPTASVSLSVPVLLV VGFAPFFCMILFIVGLHNVLLAMLMMHWLCMVLVPLLYIYVVERSFDYYRHVWKIQRCRF RRQWPWAGACCLLALGGLYAAFVCAKAVGGSWFAGVLEGARVNCLSEGLALPSPLLLLAG IYFFLVNPIVEEWFWRVFLYREFGGAVFVSAPNGVLYMRESDPLLLSWCIQSRDAADASA NVGSTAVAIPLTSDDPSRPASLALSPSRLRSAFQEPQASGQFLTAATMERAIAATAVEQG PSEPLGQTEKDDRGGGRQKQATTPENESLSGLRPRGVSGCSETETGQKAASGDTPVSPAS ACVGTQCADVGRRIHYLGESCGFVPADASGSAGLPRADCLTDHAETEGTRRGELRILPET IDEEDPETCPSPTAPVMTHVAPGVLQVDVRLSAAGQAMLSFFYASYHAVVFSTTVGLVYG FVALPCVAALGLLLTFFRNSSRFGILSGVFTHVGVDAAVVAILADVLQFL

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IDSitePeptideScoreMethod
NCLIV_044300325 SSLALSPSRL0.994unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India