NCLIV_044460 | putative DNA-damage inducible protein

_IDPredictionOTHERSPmTPCS_Position
NCLIV_044460OTHER0.9999930.0000060.000000
No Results

  • Fasta :-

    >NCLIV_044460 MQISIASDDTGTVFSLEVSEGTTLDALKALIEAETQIPPGEQQLLVDMKPISSNATTIGA AGIPDGSMILVVRRHARSVAAPAASGRDAAGPGLGSTGAIAPPVSGATGGRRQAGSTGAR REQQSLQSLFDFSSTHIVVKDGRAKTHAQQRDTTPRPSRAPADEASSGAPAAGSERTASL SDEEYLKQQAQTLINVCTTQEATLGVLALENPPLGDVLREAVQEAKEGHGKNDSFDKLVE HLRKQLDERRKAEESRLQQLNAALADPLSAAAQEFMMKEIREKQVEDNYLLAQEHLPEAF GSVYMLFIDIEVNGVPIKAFVDSGAQSTFMSYTCAEKCSLLRLMDTRYRGVAQGVGKTEI VGKIHLATLKIGQRFFPSSFTVLQDNKVEFLFGLDLLRRYQCCIDLKKNVLRIDDDEIPF LSEKDITKGMFGRADTPNSLGSPTATSAGEDKKMDVDPSASSSSSASSSSSASSSSSASS FSSSLPSSGPLRQQSTTSMDPQVEAKVQQLVDLGFLRTDAVDALSMAGGNVEDAAAFLFN QQQRIQGNLS
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NCLIV_044460.fa Sequence name : NCLIV_044460 Sequence length : 550 VALUES OF COMPUTED PARAMETERS Coef20 : 3.880 CoefTot : 0.210 ChDiff : -15 ZoneTo : 7 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.265 1.341 0.182 0.574 MesoH : -0.227 0.372 -0.229 0.231 MuHd_075 : 19.375 6.845 4.243 1.880 MuHd_095 : 15.632 4.730 4.337 1.805 MuHd_100 : 13.356 4.193 3.445 1.643 MuHd_105 : 9.012 4.488 1.933 1.384 Hmax_075 : 15.867 13.300 1.866 4.340 Hmax_095 : 12.800 9.275 1.958 3.841 Hmax_100 : 12.800 8.800 1.958 3.770 Hmax_105 : 4.600 11.783 0.067 4.002 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9898 0.0102 DFMC : 0.9632 0.0368
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 550 NCLIV_044460 MQISIASDDTGTVFSLEVSEGTTLDALKALIEAETQIPPGEQQLLVDMKPISSNATTIGAAGIPDGSMILVVRRHARSVA 80 APAASGRDAAGPGLGSTGAIAPPVSGATGGRRQAGSTGARREQQSLQSLFDFSSTHIVVKDGRAKTHAQQRDTTPRPSRA 160 PADEASSGAPAAGSERTASLSDEEYLKQQAQTLINVCTTQEATLGVLALENPPLGDVLREAVQEAKEGHGKNDSFDKLVE 240 HLRKQLDERRKAEESRLQQLNAALADPLSAAAQEFMMKEIREKQVEDNYLLAQEHLPEAFGSVYMLFIDIEVNGVPIKAF 320 VDSGAQSTFMSYTCAEKCSLLRLMDTRYRGVAQGVGKTEIVGKIHLATLKIGQRFFPSSFTVLQDNKVEFLFGLDLLRRY 400 QCCIDLKKNVLRIDDDEIPFLSEKDITKGMFGRADTPNSLGSPTATSAGEDKKMDVDPSASSSSSASSSSSASSSSSASS 480 FSSSLPSSGPLRQQSTTSMDPQVEAKVQQLVDLGFLRTDAVDALSMAGGNVEDAAAFLFNQQQRIQGNLS 560 ............................................................................P... 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ...................................................................... 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ NCLIV_044460 28 TTLDALK|AL 0.076 . NCLIV_044460 49 QLLVDMK|PI 0.078 . NCLIV_044460 73 SMILVVR|RH 0.077 . NCLIV_044460 74 MILVVRR|HA 0.172 . NCLIV_044460 77 VVRRHAR|SV 0.680 *ProP* NCLIV_044460 87 APAASGR|DA 0.171 . NCLIV_044460 111 SGATGGR|RQ 0.082 . NCLIV_044460 112 GATGGRR|QA 0.160 . NCLIV_044460 120 AGSTGAR|RE 0.099 . NCLIV_044460 121 GSTGARR|EQ 0.099 . NCLIV_044460 140 STHIVVK|DG 0.089 . NCLIV_044460 143 IVVKDGR|AK 0.090 . NCLIV_044460 145 VKDGRAK|TH 0.069 . NCLIV_044460 151 KTHAQQR|DT 0.132 . NCLIV_044460 156 QRDTTPR|PS 0.095 . NCLIV_044460 159 TTPRPSR|AP 0.231 . NCLIV_044460 176 PAAGSER|TA 0.097 . NCLIV_044460 187 SDEEYLK|QQ 0.060 . NCLIV_044460 219 PLGDVLR|EA 0.108 . NCLIV_044460 226 EAVQEAK|EG 0.066 . NCLIV_044460 231 AKEGHGK|ND 0.063 . NCLIV_044460 237 KNDSFDK|LV 0.091 . NCLIV_044460 243 KLVEHLR|KQ 0.078 . NCLIV_044460 244 LVEHLRK|QL 0.095 . NCLIV_044460 249 RKQLDER|RK 0.076 . NCLIV_044460 250 KQLDERR|KA 0.176 . NCLIV_044460 251 QLDERRK|AE 0.084 . NCLIV_044460 256 RKAEESR|LQ 0.075 . NCLIV_044460 278 AQEFMMK|EI 0.067 . NCLIV_044460 281 FMMKEIR|EK 0.081 . NCLIV_044460 283 MKEIREK|QV 0.087 . NCLIV_044460 318 VNGVPIK|AF 0.073 . NCLIV_044460 337 SYTCAEK|CS 0.054 . NCLIV_044460 342 EKCSLLR|LM 0.078 . NCLIV_044460 347 LRLMDTR|YR 0.119 . NCLIV_044460 349 LMDTRYR|GV 0.131 . NCLIV_044460 357 VAQGVGK|TE 0.066 . NCLIV_044460 363 KTEIVGK|IH 0.065 . NCLIV_044460 370 IHLATLK|IG 0.058 . NCLIV_044460 374 TLKIGQR|FF 0.086 . NCLIV_044460 387 TVLQDNK|VE 0.053 . NCLIV_044460 398 FGLDLLR|RY 0.065 . NCLIV_044460 399 GLDLLRR|YQ 0.101 . NCLIV_044460 407 QCCIDLK|KN 0.054 . NCLIV_044460 408 CCIDLKK|NV 0.108 . NCLIV_044460 412 LKKNVLR|ID 0.129 . NCLIV_044460 424 IPFLSEK|DI 0.090 . NCLIV_044460 428 SEKDITK|GM 0.067 . NCLIV_044460 433 TKGMFGR|AD 0.116 . NCLIV_044460 452 TSAGEDK|KM 0.068 . NCLIV_044460 453 SAGEDKK|MD 0.087 . NCLIV_044460 492 PSSGPLR|QQ 0.103 . NCLIV_044460 506 DPQVEAK|VQ 0.067 . NCLIV_044460 517 VDLGFLR|TD 0.067 . NCLIV_044460 544 LFNQQQR|IQ 0.096 . ____________________________^_________________

  • Fasta :-

    >NCLIV_044460 ATGCAGATCTCCATTGCTTCCGACGACACTGGCACCGTCTTCTCGCTGGAAGTGAGCGAG GGGACAACTCTCGACGCTCTCAAGGCGCTGATTGAGGCAGAGACGCAAATTCCTCCTGGC GAGCAACAGCTCCTCGTGGACATGAAGCCCATCAGCAGCAATGCTACGACCATTGGCGCC GCGGGCATTCCAGATGGGAGTATGATCCTTGTTGTTCGTCGCCATGCACGGTCTGTCGCT GCTCCCGCTGCGTCTGGGCGCGACGCTGCAGGGCCCGGCTTGGGCTCCACGGGCGCGATC GCGCCTCCTGTCTCCGGGGCAACCGGAGGGAGGCGACAAGCTGGGTCGACTGGCGCACGG CGGGAGCAGCAAAGTCTGCAGTCGCTCTTTGACTTTTCGAGTACGCACATTGTTGTGAAG GACGGGCGCGCAAAGACGCACGCCCAGCAGCGCGACACCACTCCGCGGCCGTCGCGTGCT CCAGCGGACGAGGCCTCTTCGGGGGCGCCCGCCGCAGGCAGCGAGCGAACGGCTTCTCTC TCCGACGAAGAGTACCTCAAGCAACAGGCTCAGACACTCATCAACGTCTGCACGACTCAA GAGGCGACTCTCGGCGTCTTGGCCCTCGAAAACCCCCCCCTCGGCGACGTGCTGCGAGAG GCAGTGCAGGAAGCCAAAGAAGGCCACGGCAAGAACGACAGTTTCGACAAACTCGTGGAG CACTTGAGGAAACAGCTGGACGAACGGAGAAAGGCGGAAGAGTCCCGACTGCAACAACTG AACGCTGCGCTGGCAGACCCCCTTTCGGCGGCGGCTCAGGAGTTCATGATGAAGGAGATC CGCGAGAAGCAGGTCGAAGACAACTACCTTCTCGCGCAGGAGCATCTGCCAGAGGCGTTC GGCTCCGTGTACATGCTCTTCATCGACATTGAAGTGAACGGAGTGCCCATCAAAGCCTTC GTGGACAGCGGCGCTCAGAGCACCTTCATGTCTTACACGTGCGCGGAGAAATGCAGCCTC CTGCGTCTGATGGACACGCGATACCGCGGGGTGGCTCAAGGCGTGGGGAAGACGGAAATT GTCGGGAAAATCCACTTGGCCACGCTCAAGATCGGCCAGCGATTCTTCCCTTCCAGCTTC ACGGTCCTCCAGGACAACAAAGTCGAATTCCTCTTTGGGCTCGATCTTCTGCGGCGGTAC CAGTGTTGCATCGACCTGAAGAAAAACGTTCTGCGCATCGACGACGACGAAATCCCGTTC TTGAGTGAAAAAGACATCACCAAGGGCATGTTCGGCCGGGCCGATACACCCAACAGCCTC GGCTCTCCAACCGCAACCTCCGCAGGCGAAGACAAGAAAATGGACGTTGATCCTTCCGCT TCCTCGTCTTCTTCCGCTTCCTCGTCTTCTTCCGCTTCCTCGTCTTCTTCCGCTTCCTCG TTTTCTTCCTCTTTGCCGTCTTCTGGGCCTCTGAGACAGCAGAGTACAACCAGCATGGAT CCGCAAGTCGAAGCCAAGGTGCAGCAACTCGTGGACCTCGGTTTCCTCCGCACAGACGCT GTGGACGCTCTGTCCATGGCCGGCGGAAACGTCGAGGATGCCGCCGCTTTCCTGTTCAAC CAGCAACAACGAATCCAAGGAAATCTTTCTTAA
  • Download Fasta

  • Fasta :-

    MQISIASDDTGTVFSLEVSEGTTLDALKALIEAETQIPPGEQQLLVDMKPISSNATTIGA AGIPDGSMILVVRRHARSVAAPAASGRDAAGPGLGSTGAIAPPVSGATGGRRQAGSTGAR REQQSLQSLFDFSSTHIVVKDGRAKTHAQQRDTTPRPSRAPADEASSGAPAAGSERTASL SDEEYLKQQAQTLINVCTTQEATLGVLALENPPLGDVLREAVQEAKEGHGKNDSFDKLVE HLRKQLDERRKAEESRLQQLNAALADPLSAAAQEFMMKEIREKQVEDNYLLAQEHLPEAF GSVYMLFIDIEVNGVPIKAFVDSGAQSTFMSYTCAEKCSLLRLMDTRYRGVAQGVGKTEI VGKIHLATLKIGQRFFPSSFTVLQDNKVEFLFGLDLLRRYQCCIDLKKNVLRIDDDEIPF LSEKDITKGMFGRADTPNSLGSPTATSAGEDKKMDVDPSASSSSSASSSSSASSSSSASS FSSSLPSSGPLRQQSTTSMDPQVEAKVQQLVDLGFLRTDAVDALSMAGGNVEDAAAFLFN QQQRIQGNLS

  • title: catalytic motif
  • coordinates: D322,S323,G324
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
NCLIV_044460158 STPRPSRAPA0.994unspNCLIV_044460158 STPRPSRAPA0.994unspNCLIV_044460158 STPRPSRAPA0.994unspNCLIV_044460179 SERTASLSDE0.997unspNCLIV_044460181 STASLSDEEY0.996unspNCLIV_044460422 SIPFLSEKDI0.993unspNCLIV_044460447 SPTATSAGED0.992unspNCLIV_04446085 SAPAASGRDA0.996unspNCLIV_044460154 TQRDTTPRPS0.995unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India