NCLIV_044560 | lysophospholipase, related

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_IDPredictionOTHERSPmTPCS_Position
NCLIV_044560OTHER0.9999230.0000440.000033
No Results

  • Fasta :-

    >NCLIV_044560 MAPQTAPATPATPSPSKLAKKREKAAAAAKEWFQNAGPVTQTEMRNPEGLVLYGHHWVVP DARAKVVLCHGYGMHARFDYLRHDPENLKSPPVYEGSWVHKLNNAQCSVHCLDQQSFGLS EGHKGKKSHILDMEDLPRDTLQFLYEQVLPSQDPNLPIFICGISLGGCITARVVQLAGGG PSCKKSNKVAASGEGAPEKRPLPLRGAICMAPLFRMDRLKKKNKRLLPLARALSAIVPSL EVGKPAKNQMYPFFHDLIEIDPLCYTGKSRARLSHELLRVVETVQTQAPFLAFPEPAVKT KDSPLPYPFYVPETPSLLIVHSKNDTFVDPEGSVIVAATLGAKMDGSQETLEKYQAEYDN VAKSGNVVNHPDANMWLLDNMWHCLSKELPEGDLLMDRVIRDWLRPRMGAGPDAKAMKEA KEEKEQKKEVQEETPEKPTGKEEAPSGSQEGEAASKDAPVTEGESAPAEPQEAPAGQLES PPQAVESSPPDVPAQSEAEPQEQQDTAPNHREPATPEPQQATPAPVSQAATPQPEASASG AEQSKTPDPESRAGDAEGAGAAASGDNVQQDAADGEAPVPRGPMESHSDVNL
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NCLIV_044560.fa Sequence name : NCLIV_044560 Sequence length : 592 VALUES OF COMPUTED PARAMETERS Coef20 : 3.581 CoefTot : -0.573 ChDiff : -21 ZoneTo : 22 KR : 4 DE : 0 CleavSite : 24 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.594 1.918 0.458 0.632 MesoH : -0.518 0.271 -0.269 0.198 MuHd_075 : 23.426 9.586 6.528 4.196 MuHd_095 : 18.911 12.027 6.205 4.715 MuHd_100 : 21.009 10.906 6.281 3.964 MuHd_105 : 26.560 14.361 8.221 4.418 Hmax_075 : 8.867 5.017 0.588 2.602 Hmax_095 : 6.000 2.500 -0.315 2.520 Hmax_100 : 7.200 3.400 -0.285 2.350 Hmax_105 : 9.800 6.200 0.807 2.980 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9171 0.0829 DFMC : 0.8677 0.1323
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 592 NCLIV_044560 MAPQTAPATPATPSPSKLAKKREKAAAAAKEWFQNAGPVTQTEMRNPEGLVLYGHHWVVPDARAKVVLCHGYGMHARFDY 80 LRHDPENLKSPPVYEGSWVHKLNNAQCSVHCLDQQSFGLSEGHKGKKSHILDMEDLPRDTLQFLYEQVLPSQDPNLPIFI 160 CGISLGGCITARVVQLAGGGPSCKKSNKVAASGEGAPEKRPLPLRGAICMAPLFRMDRLKKKNKRLLPLARALSAIVPSL 240 EVGKPAKNQMYPFFHDLIEIDPLCYTGKSRARLSHELLRVVETVQTQAPFLAFPEPAVKTKDSPLPYPFYVPETPSLLIV 320 HSKNDTFVDPEGSVIVAATLGAKMDGSQETLEKYQAEYDNVAKSGNVVNHPDANMWLLDNMWHCLSKELPEGDLLMDRVI 400 RDWLRPRMGAGPDAKAMKEAKEEKEQKKEVQEETPEKPTGKEEAPSGSQEGEAASKDAPVTEGESAPAEPQEAPAGQLES 480 PPQAVESSPPDVPAQSEAEPQEQQDTAPNHREPATPEPQQATPAPVSQAATPQPEASASGAEQSKTPDPESRAGDAEGAG 560 AAASGDNVQQDAADGEAPVPRGPMESHSDVNL 640 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................ 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NCLIV_044560 17 ATPSPSK|LA 0.064 . NCLIV_044560 20 SPSKLAK|KR 0.098 . NCLIV_044560 21 PSKLAKK|RE 0.087 . NCLIV_044560 22 SKLAKKR|EK 0.210 . NCLIV_044560 24 LAKKREK|AA 0.088 . NCLIV_044560 30 KAAAAAK|EW 0.076 . NCLIV_044560 45 VTQTEMR|NP 0.081 . NCLIV_044560 63 WVVPDAR|AK 0.082 . NCLIV_044560 65 VPDARAK|VV 0.072 . NCLIV_044560 77 GYGMHAR|FD 0.095 . NCLIV_044560 82 ARFDYLR|HD 0.092 . NCLIV_044560 89 HDPENLK|SP 0.067 . NCLIV_044560 101 EGSWVHK|LN 0.076 . NCLIV_044560 124 GLSEGHK|GK 0.073 . NCLIV_044560 126 SEGHKGK|KS 0.073 . NCLIV_044560 127 EGHKGKK|SH 0.114 . NCLIV_044560 138 DMEDLPR|DT 0.098 . NCLIV_044560 172 GGCITAR|VV 0.123 . NCLIV_044560 184 GGGPSCK|KS 0.067 . NCLIV_044560 185 GGPSCKK|SN 0.120 . NCLIV_044560 188 SCKKSNK|VA 0.085 . NCLIV_044560 199 GEGAPEK|RP 0.060 . NCLIV_044560 200 EGAPEKR|PL 0.128 . NCLIV_044560 205 KRPLPLR|GA 0.116 . NCLIV_044560 215 CMAPLFR|MD 0.080 . NCLIV_044560 218 PLFRMDR|LK 0.162 . NCLIV_044560 220 FRMDRLK|KK 0.067 . NCLIV_044560 221 RMDRLKK|KN 0.209 . NCLIV_044560 222 MDRLKKK|NK 0.091 . NCLIV_044560 224 RLKKKNK|RL 0.064 . NCLIV_044560 225 LKKKNKR|LL 0.148 . NCLIV_044560 231 RLLPLAR|AL 0.148 . NCLIV_044560 244 PSLEVGK|PA 0.067 . NCLIV_044560 247 EVGKPAK|NQ 0.061 . NCLIV_044560 268 PLCYTGK|SR 0.071 . NCLIV_044560 270 CYTGKSR|AR 0.073 . NCLIV_044560 272 TGKSRAR|LS 0.104 . NCLIV_044560 279 LSHELLR|VV 0.179 . NCLIV_044560 299 FPEPAVK|TK 0.059 . NCLIV_044560 301 EPAVKTK|DS 0.077 . NCLIV_044560 323 LLIVHSK|ND 0.068 . NCLIV_044560 343 AATLGAK|MD 0.068 . NCLIV_044560 353 SQETLEK|YQ 0.065 . NCLIV_044560 363 EYDNVAK|SG 0.075 . NCLIV_044560 387 MWHCLSK|EL 0.067 . NCLIV_044560 398 GDLLMDR|VI 0.077 . NCLIV_044560 401 LMDRVIR|DW 0.261 . NCLIV_044560 405 VIRDWLR|PR 0.089 . NCLIV_044560 407 RDWLRPR|MG 0.072 . NCLIV_044560 415 GAGPDAK|AM 0.067 . NCLIV_044560 418 PDAKAMK|EA 0.080 . NCLIV_044560 421 KAMKEAK|EE 0.069 . NCLIV_044560 424 KEAKEEK|EQ 0.067 . NCLIV_044560 427 KEEKEQK|KE 0.065 . NCLIV_044560 428 EEKEQKK|EV 0.158 . NCLIV_044560 437 QEETPEK|PT 0.082 . NCLIV_044560 441 PEKPTGK|EE 0.069 . NCLIV_044560 456 EGEAASK|DA 0.072 . NCLIV_044560 511 DTAPNHR|EP 0.085 . NCLIV_044560 545 SGAEQSK|TP 0.068 . NCLIV_044560 552 TPDPESR|AG 0.129 . NCLIV_044560 581 GEAPVPR|GP 0.130 . ____________________________^_________________

  • Fasta :-

    >NCLIV_044560 ATGGCTCCTCAAACCGCACCGGCGACACCCGCCACTCCTTCGCCGTCAAAGTTGGCGAAG AAGCGCGAAAAAGCCGCTGCTGCGGCGAAGGAATGGTTCCAGAACGCGGGTCCGGTGACT CAGACAGAAATGAGGAATCCCGAGGGACTTGTGCTTTACGGCCACCACTGGGTTGTTCCC GATGCTCGCGCGAAAGTGGTTTTGTGTCATGGCTATGGCATGCACGCGCGGTTCGACTAC CTGCGCCACGACCCTGAAAACCTGAAGAGCCCACCCGTGTACGAAGGCTCCTGGGTACAC AAACTCAACAACGCACAGTGCAGTGTGCACTGTTTAGACCAGCAATCGTTTGGCCTATCG GAAGGCCACAAGGGGAAGAAGAGCCATATTCTCGACATGGAGGATCTCCCACGGGATACA CTGCAGTTCCTGTACGAGCAAGTACTCCCCAGCCAGGATCCGAATCTCCCCATCTTCATT TGCGGTATCTCCCTCGGAGGATGCATCACGGCGCGCGTCGTCCAGCTTGCAGGAGGCGGC CCCTCGTGCAAAAAGAGCAACAAAGTGGCGGCATCGGGCGAAGGTGCGCCAGAAAAGAGG CCTTTGCCCCTGAGAGGAGCGATCTGCATGGCTCCGCTCTTCCGAATGGACAGACTGAAG AAGAAGAACAAGCGTTTGCTTCCGCTCGCCCGTGCGCTCTCCGCGATCGTACCATCTCTC GAAGTGGGAAAGCCCGCGAAGAATCAAATGTATCCTTTCTTCCACGACCTCATCGAAATT GACCCTCTCTGCTACACGGGCAAGTCCAGAGCACGGCTGTCGCATGAGCTGCTTCGCGTT GTGGAAACAGTGCAGACGCAGGCGCCTTTCCTTGCGTTCCCGGAACCGGCTGTGAAAACG AAGGACTCTCCTCTTCCATATCCCTTCTACGTCCCTGAGACGCCGTCCTTGCTGATCGTG CACTCCAAGAACGACACCTTCGTAGACCCCGAAGGCTCCGTGATCGTTGCAGCCACGCTG GGAGCAAAGATGGACGGTAGCCAGGAGACCCTTGAGAAATACCAAGCTGAGTACGACAAC GTGGCCAAGTCGGGGAATGTCGTAAACCATCCGGACGCGAATATGTGGCTTCTCGACAAC ATGTGGCACTGCCTCTCCAAGGAGTTGCCAGAAGGCGACTTGCTCATGGATCGTGTGATC CGTGATTGGCTTCGACCGCGAATGGGTGCGGGGCCCGATGCGAAGGCAATGAAGGAGGCT AAAGAGGAGAAGGAGCAAAAGAAAGAAGTGCAGGAGGAGACGCCTGAGAAGCCCACAGGC AAGGAAGAGGCACCTTCCGGCTCCCAAGAGGGCGAGGCTGCGTCGAAAGATGCACCTGTG ACGGAAGGTGAGTCCGCTCCGGCGGAACCCCAGGAGGCGCCGGCCGGTCAACTTGAGTCG CCACCTCAAGCTGTCGAAAGCTCTCCACCCGACGTGCCTGCCCAAAGTGAGGCGGAGCCT CAGGAACAGCAAGACACAGCGCCAAATCACCGGGAGCCTGCAACTCCAGAGCCCCAGCAG GCTACACCCGCACCAGTGTCCCAGGCAGCCACACCACAGCCCGAAGCGTCAGCCAGCGGT GCTGAGCAGTCCAAAACTCCCGACCCTGAGAGCCGAGCCGGGGATGCTGAAGGCGCTGGC GCGGCTGCTTCGGGGGACAACGTGCAGCAAGATGCTGCCGACGGAGAAGCTCCAGTGCCC CGTGGGCCAATGGAGTCACACTCAGACGTAAATCTGTAG
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  • Fasta :-

    MAPQTAPATPATPSPSKLAKKREKAAAAAKEWFQNAGPVTQTEMRNPEGLVLYGHHWVVP DARAKVVLCHGYGMHARFDYLRHDPENLKSPPVYEGSWVHKLNNAQCSVHCLDQQSFGLS EGHKGKKSHILDMEDLPRDTLQFLYEQVLPSQDPNLPIFICGISLGGCITARVVQLAGGG PSCKKSNKVAASGEGAPEKRPLPLRGAICMAPLFRMDRLKKKNKRLLPLARALSAIVPSL EVGKPAKNQMYPFFHDLIEIDPLCYTGKSRARLSHELLRVVETVQTQAPFLAFPEPAVKT KDSPLPYPFYVPETPSLLIVHSKNDTFVDPEGSVIVAATLGAKMDGSQETLEKYQAEYDN VAKSGNVVNHPDANMWLLDNMWHCLSKELPEGDLLMDRVIRDWLRPRMGAGPDAKAMKEA KEEKEQKKEVQEETPEKPTGKEEAPSGSQEGEAASKDAPVTEGESAPAEPQEAPAGQLES PPQAVESSPPDVPAQSEAEPQEQQDTAPNHREPATPEPQQATPAPVSQAATPQPEASASG AEQSKTPDPESRAGDAEGAGAAASGDNVQQDAADGEAPVPRGPMESHSDVNL

    No Results
No Results
No Results
IDSitePeptideScoreMethod
NCLIV_044560274 SRARLSHELL0.995unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India