NCLIV_045220 | hypothetical protein

_IDPredictionOTHERSPmTPCS_Position
NCLIV_045220OTHER0.9992490.0007130.000038
No Results

  • Fasta :-

    >NCLIV_045220 MVTSVAQPGGGDDERARALQEYVAKVKEHRECEAKVKKLREEVKKQSGRYEKTEEDLKAL QGVGQLIGEVLKQLDSEKFIVKTSSGPRYMVGSKPKIDKASLTAGTRVALDMTTLTVMRK LQREVDPLVFNMLHEDPGSVQYGEVGGLSEQIRQMREVIELPLTNPELFKRVGIKTPKGV LLYGPPGTGKTLLARAMASNMNCNFMKVVASAIVDKYIGESARVIREMFAYARDHEPCII FMDEIDAIGGRRFSQGTSADREIQRTLMELLNQLDGFDELGAVKIIMATNRPDVLDPALM RPGRLDRKIEIPLPNETARVDILKIHSSKIAKQGDIDYEAICKLCDGFNGADLRNVCTEA GMFAIRAERDYVVEEDFFKAARKLADNKKLESTIDYDF
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NCLIV_045220.fa Sequence name : NCLIV_045220 Sequence length : 398 VALUES OF COMPUTED PARAMETERS Coef20 : 3.437 CoefTot : -0.905 ChDiff : -1 ZoneTo : 11 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.535 0.918 -0.070 0.320 MesoH : -0.784 0.272 -0.406 0.163 MuHd_075 : 17.994 12.728 4.944 3.382 MuHd_095 : 4.084 10.473 1.748 2.665 MuHd_100 : 10.600 13.250 3.535 3.608 MuHd_105 : 12.268 14.755 4.429 4.085 Hmax_075 : -1.633 3.033 -1.462 2.053 Hmax_095 : -0.200 4.812 -1.589 1.880 Hmax_100 : 1.800 6.600 -0.749 3.160 Hmax_105 : 0.233 9.450 -0.195 3.523 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9839 0.0161 DFMC : 0.9722 0.0278
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 398 NCLIV_045220 MVTSVAQPGGGDDERARALQEYVAKVKEHRECEAKVKKLREEVKKQSGRYEKTEEDLKALQGVGQLIGEVLKQLDSEKFI 80 VKTSSGPRYMVGSKPKIDKASLTAGTRVALDMTTLTVMRKLQREVDPLVFNMLHEDPGSVQYGEVGGLSEQIRQMREVIE 160 LPLTNPELFKRVGIKTPKGVLLYGPPGTGKTLLARAMASNMNCNFMKVVASAIVDKYIGESARVIREMFAYARDHEPCII 240 FMDEIDAIGGRRFSQGTSADREIQRTLMELLNQLDGFDELGAVKIIMATNRPDVLDPALMRPGRLDRKIEIPLPNETARV 320 DILKIHSSKIAKQGDIDYEAICKLCDGFNGADLRNVCTEAGMFAIRAERDYVVEEDFFKAARKLADNKKLESTIDYDF 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 .............................................................................. 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NCLIV_045220 15 GGGDDER|AR 0.079 . NCLIV_045220 17 GDDERAR|AL 0.096 . NCLIV_045220 25 LQEYVAK|VK 0.071 . NCLIV_045220 27 EYVAKVK|EH 0.062 . NCLIV_045220 30 AKVKEHR|EC 0.107 . NCLIV_045220 35 HRECEAK|VK 0.061 . NCLIV_045220 37 ECEAKVK|KL 0.068 . NCLIV_045220 38 CEAKVKK|LR 0.111 . NCLIV_045220 40 AKVKKLR|EE 0.093 . NCLIV_045220 44 KLREEVK|KQ 0.065 . NCLIV_045220 45 LREEVKK|QS 0.219 . NCLIV_045220 49 VKKQSGR|YE 0.117 . NCLIV_045220 52 QSGRYEK|TE 0.124 . NCLIV_045220 58 KTEEDLK|AL 0.060 . NCLIV_045220 72 LIGEVLK|QL 0.068 . NCLIV_045220 78 KQLDSEK|FI 0.064 . NCLIV_045220 82 SEKFIVK|TS 0.065 . NCLIV_045220 88 KTSSGPR|YM 0.095 . NCLIV_045220 94 RYMVGSK|PK 0.059 . NCLIV_045220 96 MVGSKPK|ID 0.077 . NCLIV_045220 99 SKPKIDK|AS 0.071 . NCLIV_045220 107 SLTAGTR|VA 0.075 . NCLIV_045220 119 TTLTVMR|KL 0.081 . NCLIV_045220 120 TLTVMRK|LQ 0.077 . NCLIV_045220 123 VMRKLQR|EV 0.142 . NCLIV_045220 153 GLSEQIR|QM 0.130 . NCLIV_045220 156 EQIRQMR|EV 0.341 . NCLIV_045220 170 TNPELFK|RV 0.087 . NCLIV_045220 171 NPELFKR|VG 0.148 . NCLIV_045220 175 FKRVGIK|TP 0.067 . NCLIV_045220 178 VGIKTPK|GV 0.074 . NCLIV_045220 190 GPPGTGK|TL 0.060 . NCLIV_045220 195 GKTLLAR|AM 0.083 . NCLIV_045220 207 MNCNFMK|VV 0.089 . NCLIV_045220 216 ASAIVDK|YI 0.098 . NCLIV_045220 223 YIGESAR|VI 0.103 . NCLIV_045220 226 ESARVIR|EM 0.333 . NCLIV_045220 233 EMFAYAR|DH 0.110 . NCLIV_045220 251 IDAIGGR|RF 0.101 . NCLIV_045220 252 DAIGGRR|FS 0.106 . NCLIV_045220 261 QGTSADR|EI 0.077 . NCLIV_045220 265 ADREIQR|TL 0.106 . NCLIV_045220 284 DELGAVK|II 0.056 . NCLIV_045220 291 IIMATNR|PD 0.074 . NCLIV_045220 301 LDPALMR|PG 0.072 . NCLIV_045220 304 ALMRPGR|LD 0.280 . NCLIV_045220 307 RPGRLDR|KI 0.352 . NCLIV_045220 308 PGRLDRK|IE 0.069 . NCLIV_045220 319 LPNETAR|VD 0.116 . NCLIV_045220 324 ARVDILK|IH 0.069 . NCLIV_045220 329 LKIHSSK|IA 0.082 . NCLIV_045220 332 HSSKIAK|QG 0.080 . NCLIV_045220 343 DYEAICK|LC 0.055 . NCLIV_045220 354 FNGADLR|NV 0.133 . NCLIV_045220 366 AGMFAIR|AE 0.090 . NCLIV_045220 369 FAIRAER|DY 0.282 . NCLIV_045220 379 VEEDFFK|AA 0.068 . NCLIV_045220 382 DFFKAAR|KL 0.085 . NCLIV_045220 383 FFKAARK|LA 0.085 . NCLIV_045220 388 RKLADNK|KL 0.063 . NCLIV_045220 389 KLADNKK|LE 0.108 . ____________________________^_________________

  • Fasta :-

    >NCLIV_045220 ATGGTCACCTCTGTAGCACAGCCGGGGGGGGGAGATGACGAGAGAGCGCGTGCACTGCAG GAGTATGTCGCGAAAGTGAAGGAGCACAGAGAGTGCGAAGCAAAAGTGAAAAAACTCCGC GAGGAAGTGAAGAAGCAGTCTGGCAGATATGAGAAGACCGAAGAAGATTTGAAGGCGCTG CAAGGCGTCGGCCAACTGATTGGAGAAGTTTTGAAGCAGCTAGACTCTGAGAAATTCATC GTCAAAACGTCCAGTGGGCCTCGCTACATGGTTGGCAGCAAACCGAAAATCGACAAAGCC TCGCTGACGGCAGGCACTCGCGTCGCCCTCGACATGACGACGTTGACGGTGATGCGCAAG TTGCAGAGAGAAGTGGATCCTCTCGTCTTCAACATGCTCCACGAGGATCCTGGAAGTGTG CAGTACGGAGAAGTGGGAGGTCTCAGCGAACAGATTCGCCAAATGCGAGAGGTGATCGAG TTGCCTCTGACGAACCCGGAACTCTTCAAGAGAGTGGGGATCAAAACGCCCAAAGGCGTT CTCCTCTACGGCCCCCCGGGGACAGGGAAAACCCTTCTTGCTCGCGCGATGGCGTCGAAC ATGAATTGCAACTTCATGAAAGTCGTCGCTTCGGCCATTGTGGATAAGTACATTGGCGAA AGTGCACGCGTCATTCGCGAGATGTTTGCGTATGCCCGAGACCACGAACCGTGCATCATT TTCATGGATGAAATTGACGCCATCGGCGGTCGCCGCTTCTCCCAAGGCACCTCTGCAGAC CGCGAAATTCAGCGCACGCTCATGGAGCTGTTGAATCAACTCGATGGCTTCGATGAACTC GGAGCTGTGAAGATCATCATGGCCACAAACAGACCAGATGTCCTCGACCCTGCGCTTATG CGTCCTGGCCGTCTCGACCGCAAAATTGAAATTCCTCTGCCTAACGAGACAGCGCGCGTC GACATCTTGAAAATCCACTCCAGCAAAATCGCCAAACAGGGCGACATCGACTACGAGGCC ATCTGCAAGCTGTGCGATGGATTCAACGGCGCCGACTTGCGAAACGTATGCACTGAGGCG GGCATGTTTGCGATTCGAGCAGAGAGAGACTACGTTGTTGAAGAAGATTTTTTCAAGGCT GCTCGGAAGTTGGCAGATAACAAAAAGCTTGAGAGCACGATCGACTACGACTTTTGA
  • Download Fasta

  • Fasta :-

    MVTSVAQPGGGDDERARALQEYVAKVKEHRECEAKVKKLREEVKKQSGRYEKTEEDLKAL QGVGQLIGEVLKQLDSEKFIVKTSSGPRYMVGSKPKIDKASLTAGTRVALDMTTLTVMRK LQREVDPLVFNMLHEDPGSVQYGEVGGLSEQIRQMREVIELPLTNPELFKRVGIKTPKGV LLYGPPGTGKTLLARAMASNMNCNFMKVVASAIVDKYIGESARVIREMFAYARDHEPCII FMDEIDAIGGRRFSQGTSADREIQRTLMELLNQLDGFDELGAVKIIMATNRPDVLDPALM RPGRLDRKIEIPLPNETARVDILKIHSSKIAKQGDIDYEAICKLCDGFNGADLRNVCTEA GMFAIRAERDYVVEEDFFKAARKLADNKKLESTIDYDF

  • title: ATP binding site
  • coordinates: P185,P186,G187,T188,G189,K190,T191,L192,D243,N290
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
NCLIV_045220254 SGRRFSQGTS0.994unspNCLIV_045220392 SKKLESTIDY0.995unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India