NCLIV_046540 | putative oligoendopeptidase F

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0004222      

  • Computed_GO_Functions:  metalloendopeptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
NCLIV_046540OTHER0.9634910.0352500.001259
No Results

  • Fasta :-

    >NCLIV_046540 MLFLLADFGFSHVHASTEEENKPLVRLDPATLPRYNLTRHFGYTSIFDPRIDEDIEKLSR QAEAFNKRFKGTLDSALSEALEAYEEVDEAVDMVDYYVALVSAVNTTDEAIRQRVNQLES RMASEIQPHLLFVSVELASLPEAAIEKQKAANDNLHFYSGFLGAARRRAPHMLSESVERA LMVRKPLTVTTATDYYFKQLDDATFLMQGERMILPQVLSFIMDSQQERRWAAQAAVKQGL QEHMITKFGALSLNIVLGSWYAERKERGYQTVRSSRNVSNNVSDATIEALIKAGETVAVQ LTKRYYRLKKQILVKKGALTTFDFADRLAPLPLKSSGHVFDWEESTNIVRTAYSSFSPTM AKLFDQLLDEERIDAPAVPGKRTPACYLGTPTTGPFVVLQHVGQQHCVETLAHEAGHAIH SILSYEQGNLQHVPPLTVAEMASLMGERIVFDSLLGRTTDPEERLALLLSHIDGWTSTVT RQLMFDDFESRVHEARTQGTIPDGAFTAMWKEALEKYFGAEGEVFDSFANAELDWVRIPH FHRQPFYVHAYAFSELAVGSLYGVYKTSPNGFEQKYLDVLRSGNKKSFEEIMTPFGLDPS VESFWADAMKATGGAVMDQAEALAAELDLI
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NCLIV_046540.fa Sequence name : NCLIV_046540 Sequence length : 630 VALUES OF COMPUTED PARAMETERS Coef20 : 3.562 CoefTot : 0.507 ChDiff : -23 ZoneTo : 6 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.388 1.347 0.202 0.526 MesoH : -0.166 0.214 -0.344 0.244 MuHd_075 : 12.115 6.841 3.659 2.149 MuHd_095 : 21.458 11.509 5.617 3.092 MuHd_100 : 21.119 11.903 6.137 3.135 MuHd_105 : 15.363 9.109 5.269 2.495 Hmax_075 : 15.983 13.183 1.868 4.783 Hmax_095 : 16.712 15.050 2.515 5.416 Hmax_100 : 16.600 14.300 2.542 5.650 Hmax_105 : 16.000 14.200 2.506 5.520 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9794 0.0206 DFMC : 0.9661 0.0339
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 630 NCLIV_046540 MLFLLADFGFSHVHASTEEENKPLVRLDPATLPRYNLTRHFGYTSIFDPRIDEDIEKLSRQAEAFNKRFKGTLDSALSEA 80 LEAYEEVDEAVDMVDYYVALVSAVNTTDEAIRQRVNQLESRMASEIQPHLLFVSVELASLPEAAIEKQKAANDNLHFYSG 160 FLGAARRRAPHMLSESVERALMVRKPLTVTTATDYYFKQLDDATFLMQGERMILPQVLSFIMDSQQERRWAAQAAVKQGL 240 QEHMITKFGALSLNIVLGSWYAERKERGYQTVRSSRNVSNNVSDATIEALIKAGETVAVQLTKRYYRLKKQILVKKGALT 320 TFDFADRLAPLPLKSSGHVFDWEESTNIVRTAYSSFSPTMAKLFDQLLDEERIDAPAVPGKRTPACYLGTPTTGPFVVLQ 400 HVGQQHCVETLAHEAGHAIHSILSYEQGNLQHVPPLTVAEMASLMGERIVFDSLLGRTTDPEERLALLLSHIDGWTSTVT 480 RQLMFDDFESRVHEARTQGTIPDGAFTAMWKEALEKYFGAEGEVFDSFANAELDWVRIPHFHRQPFYVHAYAFSELAVGS 560 LYGVYKTSPNGFEQKYLDVLRSGNKKSFEEIMTPFGLDPSVESFWADAMKATGGAVMDQAEALAAELDLI 640 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ...................................................................... 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NCLIV_046540 22 STEEENK|PL 0.060 . NCLIV_046540 26 ENKPLVR|LD 0.077 . NCLIV_046540 34 DPATLPR|YN 0.091 . NCLIV_046540 39 PRYNLTR|HF 0.099 . NCLIV_046540 50 TSIFDPR|ID 0.143 . NCLIV_046540 57 IDEDIEK|LS 0.064 . NCLIV_046540 60 DIEKLSR|QA 0.090 . NCLIV_046540 67 QAEAFNK|RF 0.062 . NCLIV_046540 68 AEAFNKR|FK 0.268 . NCLIV_046540 70 AFNKRFK|GT 0.075 . NCLIV_046540 112 TTDEAIR|QR 0.081 . NCLIV_046540 114 DEAIRQR|VN 0.076 . NCLIV_046540 121 VNQLESR|MA 0.147 . NCLIV_046540 147 PEAAIEK|QK 0.061 . NCLIV_046540 149 AAIEKQK|AA 0.087 . NCLIV_046540 166 GFLGAAR|RR 0.071 . NCLIV_046540 167 FLGAARR|RA 0.134 . NCLIV_046540 168 LGAARRR|AP 0.132 . NCLIV_046540 179 LSESVER|AL 0.089 . NCLIV_046540 184 ERALMVR|KP 0.084 . NCLIV_046540 185 RALMVRK|PL 0.082 . NCLIV_046540 198 ATDYYFK|QL 0.072 . NCLIV_046540 211 FLMQGER|MI 0.091 . NCLIV_046540 228 MDSQQER|RW 0.108 . NCLIV_046540 229 DSQQERR|WA 0.192 . NCLIV_046540 237 AAQAAVK|QG 0.062 . NCLIV_046540 247 QEHMITK|FG 0.068 . NCLIV_046540 264 GSWYAER|KE 0.085 . NCLIV_046540 265 SWYAERK|ER 0.090 . NCLIV_046540 267 YAERKER|GY 0.351 . NCLIV_046540 273 RGYQTVR|SS 0.102 . NCLIV_046540 276 QTVRSSR|NV 0.380 . NCLIV_046540 292 TIEALIK|AG 0.067 . NCLIV_046540 303 VAVQLTK|RY 0.062 . NCLIV_046540 304 AVQLTKR|YY 0.144 . NCLIV_046540 307 LTKRYYR|LK 0.269 . NCLIV_046540 309 KRYYRLK|KQ 0.067 . NCLIV_046540 310 RYYRLKK|QI 0.279 . NCLIV_046540 315 KKQILVK|KG 0.059 . NCLIV_046540 316 KQILVKK|GA 0.122 . NCLIV_046540 327 TFDFADR|LA 0.076 . NCLIV_046540 334 LAPLPLK|SS 0.100 . NCLIV_046540 350 ESTNIVR|TA 0.080 . NCLIV_046540 362 FSPTMAK|LF 0.070 . NCLIV_046540 372 QLLDEER|ID 0.079 . NCLIV_046540 381 APAVPGK|RT 0.071 . NCLIV_046540 382 PAVPGKR|TP 0.128 . NCLIV_046540 448 ASLMGER|IV 0.127 . NCLIV_046540 457 FDSLLGR|TT 0.136 . NCLIV_046540 464 TTDPEER|LA 0.068 . NCLIV_046540 481 WTSTVTR|QL 0.100 . NCLIV_046540 491 FDDFESR|VH 0.073 . NCLIV_046540 496 SRVHEAR|TQ 0.165 . NCLIV_046540 511 AFTAMWK|EA 0.061 . NCLIV_046540 516 WKEALEK|YF 0.089 . NCLIV_046540 537 AELDWVR|IP 0.072 . NCLIV_046540 543 RIPHFHR|QP 0.085 . NCLIV_046540 566 SLYGVYK|TS 0.073 . NCLIV_046540 575 PNGFEQK|YL 0.077 . NCLIV_046540 581 KYLDVLR|SG 0.099 . NCLIV_046540 585 VLRSGNK|KS 0.062 . NCLIV_046540 586 LRSGNKK|SF 0.281 . NCLIV_046540 610 FWADAMK|AT 0.098 . ____________________________^_________________

  • Fasta :-

    >NCLIV_046540 ATGCTTTTCCTCCTGGCCGATTTCGGCTTCTCTCACGTGCACGCGTCCACAGAAGAAGAG AACAAACCTCTAGTACGCCTGGACCCGGCTACCCTCCCCCGGTACAACCTGACGCGTCAT TTTGGTTATACGTCGATCTTCGACCCCAGAATCGATGAGGACATCGAAAAGCTCAGCAGG CAGGCCGAAGCGTTCAACAAGCGATTCAAAGGCACCCTGGACTCCGCCCTTTCGGAGGCA CTCGAGGCGTACGAGGAGGTCGATGAAGCCGTGGACATGGTGGACTACTATGTCGCCCTC GTATCTGCAGTGAACACCACGGATGAAGCGATACGACAGCGCGTGAACCAACTGGAGTCT CGAATGGCCTCGGAGATACAGCCGCATCTTCTATTTGTCTCCGTGGAGCTTGCGTCGCTA CCGGAGGCGGCGATTGAGAAGCAGAAGGCAGCCAACGACAATCTCCACTTCTACTCCGGT TTCCTTGGGGCGGCGAGGCGACGCGCGCCTCACATGCTGTCCGAGTCGGTGGAGCGCGCC CTCATGGTGCGTAAGCCTTTGACGGTCACGACTGCCACGGACTACTATTTCAAGCAACTC GACGATGCGACCTTCCTCATGCAGGGCGAGAGGATGATTCTGCCGCAAGTCCTCTCTTTC ATCATGGACAGCCAACAAGAGCGCCGCTGGGCCGCGCAGGCGGCTGTCAAGCAGGGTCTG CAAGAGCACATGATCACAAAGTTCGGAGCGCTCAGCCTGAACATTGTGCTGGGGTCGTGG TATGCGGAGCGAAAAGAGAGAGGATACCAGACAGTGCGTTCGTCCCGCAATGTCTCCAAC AATGTGTCTGACGCAACCATTGAAGCGCTCATCAAGGCAGGCGAGACGGTCGCAGTTCAG CTGACGAAACGGTACTACCGGTTGAAGAAGCAAATCCTCGTAAAAAAAGGTGCACTGACG ACGTTCGATTTCGCGGATCGCCTGGCGCCGCTGCCCCTAAAATCAAGCGGCCACGTTTTC GACTGGGAGGAATCAACGAACATTGTCAGGACAGCGTACAGTTCTTTCTCGCCGACCATG GCGAAGCTATTTGACCAGTTGCTGGACGAAGAGCGGATTGACGCGCCTGCAGTCCCCGGA AAACGCACGCCTGCATGCTACTTGGGCACGCCGACAACGGGGCCGTTCGTCGTTCTGCAG CACGTGGGACAGCAACATTGCGTCGAAACTCTCGCGCACGAAGCCGGTCATGCCATCCAC TCCATTCTCTCCTACGAGCAAGGAAACCTGCAGCACGTGCCACCATTGACGGTCGCTGAG ATGGCGAGCCTCATGGGAGAGCGAATTGTCTTTGACAGCTTGCTGGGGCGCACGACGGAT CCTGAGGAGCGCCTGGCTCTTCTGCTGAGTCATATTGATGGTTGGACCAGCACGGTTACC CGACAGCTTATGTTTGATGACTTCGAGAGTAGAGTGCACGAGGCCCGCACTCAAGGGACA ATACCGGACGGCGCATTCACAGCAATGTGGAAGGAAGCTCTGGAGAAGTACTTCGGTGCT GAAGGCGAGGTTTTTGACAGCTTTGCAAACGCGGAGTTGGATTGGGTCCGCATTCCACAT TTTCATCGACAACCCTTCTATGTCCACGCGTACGCGTTCTCCGAGCTTGCGGTGGGATCT CTCTATGGCGTGTACAAGACGTCGCCCAATGGCTTCGAACAGAAATACCTCGACGTACTG CGGTCAGGAAACAAAAAGAGTTTCGAAGAGATCATGACGCCCTTCGGCCTGGACCCCTCC GTCGAGTCTTTCTGGGCTGATGCCATGAAAGCTACAGGAGGAGCGGTGATGGACCAGGCC GAGGCCCTCGCAGCAGAGCTGGACTTAATCTGA
  • Download Fasta

  • Fasta :-

    MLFLLADFGFSHVHASTEEENKPLVRLDPATLPRYNLTRHFGYTSIFDPRIDEDIEKLSR QAEAFNKRFKGTLDSALSEALEAYEEVDEAVDMVDYYVALVSAVNTTDEAIRQRVNQLES RMASEIQPHLLFVSVELASLPEAAIEKQKAANDNLHFYSGFLGAARRRAPHMLSESVERA LMVRKPLTVTTATDYYFKQLDDATFLMQGERMILPQVLSFIMDSQQERRWAAQAAVKQGL QEHMITKFGALSLNIVLGSWYAERKERGYQTVRSSRNVSNNVSDATIEALIKAGETVAVQ LTKRYYRLKKQILVKKGALTTFDFADRLAPLPLKSSGHVFDWEESTNIVRTAYSSFSPTM AKLFDQLLDEERIDAPAVPGKRTPACYLGTPTTGPFVVLQHVGQQHCVETLAHEAGHAIH SILSYEQGNLQHVPPLTVAEMASLMGERIVFDSLLGRTTDPEERLALLLSHIDGWTSTVT RQLMFDDFESRVHEARTQGTIPDGAFTAMWKEALEKYFGAEGEVFDSFANAELDWVRIPH FHRQPFYVHAYAFSELAVGSLYGVYKTSPNGFEQKYLDVLRSGNKKSFEEIMTPFGLDPS VESFWADAMKATGGAVMDQAEALAAELDLI

  • title: Zn binding site
  • coordinates: H413,H417,E440
No Results
No Results
IDSitePeptideScoreMethod
NCLIV_046540357 SYSSFSPTMA0.993unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India