NCLIV_046570 | PST-A protein, related

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_IDPredictionOTHERSPmTPCS_Position
NCLIV_046570OTHER0.9999880.0000110.000001
No Results

  • Fasta :-

    >NCLIV_046570 MGNSQGNARMRSPNDISDVARGKDGWVELDRDEACRFVSLEAPITDAVEFPYDNKPEHGS FVNVQGLRIHTYFWYPQASQSRTSGAGLRESTSRPDASASPLLPQRHSSCSPTASFSTLG AGQAAPSSSLDRNRGPTKVAHAGFYPPHPSPSVTSVPRHALPTCNGRRAYTADHLGAASG SLPAPEQALLDKATAVCGARGVVLLLHGYCNHSRLAWLSKPLPPGHRRRDPTVVGYPTVS EALSVPAAVASNSSCRSEADEQSFDFSPAATLSTAGSWKNALEGTSEFKPDPPGRVASRS RAASLTAEEPAGGCDRTEGWVETVGDASVSASWHIQYQGSWVEALNRAGFLVAAMDFQGH GLSEGWQGKRGSVNRLDDLALDVIQFITIIRRRCQFLRGVYRHCVHDGKHRSGSREVKEG AERRPDSERQTSSKPRRGMPTSEMEPNGGETKEQSTQESNGGIDNDEENPPIFLLGVSLG GWAAARTIQLLGDPKAVASLFLVCDPNGPLPQFSGILTPHAAASPPHSGASAGPLPFPIE KQLTSSLSAARVSRQRQSSSFASLGALSSVGQTQTSLTTAGVSGCVLLSPMLDLSFVKSA TKYNLYRHLMVRLAEWAPNMVVSRPLPNKEYPYLEAHMQRDKYTYKGGSRLRMVREMFEG TDTILHPECLSLISESTCGALLVMHNLLDGVCGVEGSLRLFHGATRIRDKSFLAVNAYVD GTASTQHLNPVEFSTGAPAEVLARFGTGALPAPASTLAGCGSPEVLQPLQETREGVKAAG GSMDLEGQAAAQDPHATPCAVTAEIRCGLAHDLSEGTSESVERKRTPSQHRHQGTEARDS VSGPAVGKEEVGTEEVCDVTSLNAHEGGKSQQQENVERAVPFQATGREFSLVFF
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NCLIV_046570.fa Sequence name : NCLIV_046570 Sequence length : 894 VALUES OF COMPUTED PARAMETERS Coef20 : 3.673 CoefTot : -0.675 ChDiff : -8 ZoneTo : 14 KR : 2 DE : 0 CleavSite : 11 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.729 1.571 0.323 0.611 MesoH : 0.401 0.523 -0.143 0.359 MuHd_075 : 16.065 10.122 4.474 3.521 MuHd_095 : 27.460 14.830 7.413 4.094 MuHd_100 : 24.706 12.864 7.049 4.295 MuHd_105 : 21.052 8.731 5.782 3.798 Hmax_075 : -2.700 -2.700 -2.816 0.580 Hmax_095 : -4.000 -0.400 -2.981 0.550 Hmax_100 : -3.400 -0.400 -1.892 0.550 Hmax_105 : 3.617 0.117 -1.506 1.960 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8897 0.1103 DFMC : 0.8884 0.1116
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 894 NCLIV_046570 MGNSQGNARMRSPNDISDVARGKDGWVELDRDEACRFVSLEAPITDAVEFPYDNKPEHGSFVNVQGLRIHTYFWYPQASQ 80 SRTSGAGLRESTSRPDASASPLLPQRHSSCSPTASFSTLGAGQAAPSSSLDRNRGPTKVAHAGFYPPHPSPSVTSVPRHA 160 LPTCNGRRAYTADHLGAASGSLPAPEQALLDKATAVCGARGVVLLLHGYCNHSRLAWLSKPLPPGHRRRDPTVVGYPTVS 240 EALSVPAAVASNSSCRSEADEQSFDFSPAATLSTAGSWKNALEGTSEFKPDPPGRVASRSRAASLTAEEPAGGCDRTEGW 320 VETVGDASVSASWHIQYQGSWVEALNRAGFLVAAMDFQGHGLSEGWQGKRGSVNRLDDLALDVIQFITIIRRRCQFLRGV 400 YRHCVHDGKHRSGSREVKEGAERRPDSERQTSSKPRRGMPTSEMEPNGGETKEQSTQESNGGIDNDEENPPIFLLGVSLG 480 GWAAARTIQLLGDPKAVASLFLVCDPNGPLPQFSGILTPHAAASPPHSGASAGPLPFPIEKQLTSSLSAARVSRQRQSSS 560 FASLGALSSVGQTQTSLTTAGVSGCVLLSPMLDLSFVKSATKYNLYRHLMVRLAEWAPNMVVSRPLPNKEYPYLEAHMQR 640 DKYTYKGGSRLRMVREMFEGTDTILHPECLSLISESTCGALLVMHNLLDGVCGVEGSLRLFHGATRIRDKSFLAVNAYVD 720 GTASTQHLNPVEFSTGAPAEVLARFGTGALPAPASTLAGCGSPEVLQPLQETREGVKAAGGSMDLEGQAAAQDPHATPCA 800 VTAEIRCGLAHDLSEGTSESVERKRTPSQHRHQGTEARDSVSGPAVGKEEVGTEEVCDVTSLNAHEGGKSQQQENVERAV 880 PFQATGREFSLVFF 960 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 ................................................................................ 880 .............. 960 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NCLIV_046570 9 NSQGNAR|MR 0.104 . NCLIV_046570 11 QGNARMR|SP 0.156 . NCLIV_046570 21 DISDVAR|GK 0.159 . NCLIV_046570 23 SDVARGK|DG 0.073 . NCLIV_046570 31 GWVELDR|DE 0.087 . NCLIV_046570 36 DRDEACR|FV 0.148 . NCLIV_046570 55 EFPYDNK|PE 0.057 . NCLIV_046570 68 VNVQGLR|IH 0.062 . NCLIV_046570 82 PQASQSR|TS 0.143 . NCLIV_046570 89 TSGAGLR|ES 0.081 . NCLIV_046570 94 LRESTSR|PD 0.086 . NCLIV_046570 106 SPLLPQR|HS 0.100 . NCLIV_046570 132 PSSSLDR|NR 0.103 . NCLIV_046570 134 SSLDRNR|GP 0.128 . NCLIV_046570 138 RNRGPTK|VA 0.084 . NCLIV_046570 158 SVTSVPR|HA 0.095 . NCLIV_046570 167 LPTCNGR|RA 0.098 . NCLIV_046570 168 PTCNGRR|AY 0.119 . NCLIV_046570 192 EQALLDK|AT 0.067 . NCLIV_046570 200 TAVCGAR|GV 0.127 . NCLIV_046570 214 GYCNHSR|LA 0.091 . NCLIV_046570 220 RLAWLSK|PL 0.071 . NCLIV_046570 227 PLPPGHR|RR 0.070 . NCLIV_046570 228 LPPGHRR|RD 0.124 . NCLIV_046570 229 PPGHRRR|DP 0.261 . NCLIV_046570 256 ASNSSCR|SE 0.157 . NCLIV_046570 279 STAGSWK|NA 0.079 . NCLIV_046570 289 EGTSEFK|PD 0.062 . NCLIV_046570 295 KPDPPGR|VA 0.163 . NCLIV_046570 299 PGRVASR|SR 0.147 . NCLIV_046570 301 RVASRSR|AA 0.106 . NCLIV_046570 316 PAGGCDR|TE 0.106 . NCLIV_046570 347 WVEALNR|AG 0.075 . NCLIV_046570 369 SEGWQGK|RG 0.065 . NCLIV_046570 370 EGWQGKR|GS 0.127 . NCLIV_046570 375 KRGSVNR|LD 0.115 . NCLIV_046570 391 QFITIIR|RR 0.077 . NCLIV_046570 392 FITIIRR|RC 0.081 . NCLIV_046570 393 ITIIRRR|CQ 0.100 . NCLIV_046570 398 RRCQFLR|GV 0.158 . NCLIV_046570 402 FLRGVYR|HC 0.093 . NCLIV_046570 409 HCVHDGK|HR 0.068 . NCLIV_046570 411 VHDGKHR|SG 0.126 . NCLIV_046570 415 KHRSGSR|EV 0.109 . NCLIV_046570 418 SGSREVK|EG 0.141 . NCLIV_046570 423 VKEGAER|RP 0.074 . NCLIV_046570 424 KEGAERR|PD 0.174 . NCLIV_046570 429 RRPDSER|QT 0.127 . NCLIV_046570 434 ERQTSSK|PR 0.073 . NCLIV_046570 436 QTSSKPR|RG 0.112 . NCLIV_046570 437 TSSKPRR|GM 0.397 . NCLIV_046570 452 PNGGETK|EQ 0.072 . NCLIV_046570 486 GGWAAAR|TI 0.084 . NCLIV_046570 495 QLLGDPK|AV 0.064 . NCLIV_046570 541 LPFPIEK|QL 0.069 . NCLIV_046570 551 SSLSAAR|VS 0.086 . NCLIV_046570 554 SAARVSR|QR 0.238 . NCLIV_046570 556 ARVSRQR|QS 0.087 . NCLIV_046570 598 LDLSFVK|SA 0.082 . NCLIV_046570 602 FVKSATK|YN 0.056 . NCLIV_046570 607 TKYNLYR|HL 0.113 . NCLIV_046570 612 YRHLMVR|LA 0.155 . NCLIV_046570 624 PNMVVSR|PL 0.100 . NCLIV_046570 629 SRPLPNK|EY 0.068 . NCLIV_046570 640 LEAHMQR|DK 0.136 . NCLIV_046570 642 AHMQRDK|YT 0.076 . NCLIV_046570 646 RDKYTYK|GG 0.071 . NCLIV_046570 650 TYKGGSR|LR 0.072 . NCLIV_046570 652 KGGSRLR|MV 0.143 . NCLIV_046570 655 SRLRMVR|EM 0.314 . NCLIV_046570 699 GVEGSLR|LF 0.083 . NCLIV_046570 706 LFHGATR|IR 0.089 . NCLIV_046570 708 HGATRIR|DK 0.102 . NCLIV_046570 710 ATRIRDK|SF 0.090 . NCLIV_046570 744 PAEVLAR|FG 0.111 . NCLIV_046570 773 QPLQETR|EG 0.081 . NCLIV_046570 777 ETREGVK|AA 0.077 . NCLIV_046570 806 AVTAEIR|CG 0.070 . NCLIV_046570 823 TSESVER|KR 0.111 . NCLIV_046570 824 SESVERK|RT 0.104 . NCLIV_046570 825 ESVERKR|TP 0.239 . NCLIV_046570 831 RTPSQHR|HQ 0.120 . NCLIV_046570 838 HQGTEAR|DS 0.134 . NCLIV_046570 848 SGPAVGK|EE 0.059 . NCLIV_046570 869 NAHEGGK|SQ 0.078 . NCLIV_046570 878 QQENVER|AV 0.112 . NCLIV_046570 887 PFQATGR|EF 0.092 . ____________________________^_________________

  • Fasta :-

    >NCLIV_046570 ATGGGCAATTCCCAGGGGAACGCTCGGATGCGTTCGCCCAATGACATCTCCGACGTTGCT CGTGGAAAAGACGGATGGGTTGAACTGGATCGTGACGAAGCGTGCCGGTTTGTGTCTCTT GAGGCTCCCATCACTGACGCAGTCGAGTTTCCCTATGATAACAAGCCTGAGCACGGTTCC TTCGTGAATGTCCAAGGTCTCCGTATCCATACGTATTTCTGGTACCCTCAAGCGTCGCAG TCGAGAACCTCTGGTGCAGGTTTGAGAGAATCAACTTCGCGTCCTGACGCGTCTGCCTCC CCTTTGCTGCCCCAGCGACACTCTTCTTGCTCGCCTACTGCGTCCTTCTCGACACTCGGC GCAGGACAGGCCGCGCCGTCTTCTAGCCTTGATCGCAACAGAGGGCCGACGAAAGTCGCC CACGCTGGATTTTATCCTCCGCATCCGTCTCCATCCGTCACATCTGTCCCCCGACATGCG CTTCCGACGTGCAACGGGAGACGCGCCTACACAGCAGACCATCTGGGGGCGGCGTCCGGC TCACTGCCCGCACCAGAACAGGCTCTTCTCGACAAAGCGACAGCTGTGTGCGGCGCTCGA GGAGTCGTGCTCCTTCTCCATGGCTACTGCAACCACTCCCGCCTTGCCTGGCTTTCCAAA CCTCTGCCGCCGGGTCACAGGCGAAGAGACCCGACGGTGGTTGGGTACCCAACCGTCTCT GAAGCTTTGTCGGTGCCTGCGGCCGTCGCTTCAAACAGTTCGTGTCGATCCGAAGCGGAC GAGCAAAGCTTCGACTTTTCGCCCGCCGCCACTCTCTCCACAGCTGGGAGTTGGAAAAAC GCGCTAGAGGGTACATCGGAGTTCAAACCTGATCCGCCGGGGCGAGTGGCGAGCCGCTCG CGAGCGGCGTCGCTGACGGCTGAAGAACCGGCCGGAGGGTGCGATCGAACTGAAGGATGG GTGGAGACAGTTGGGGACGCCAGCGTCTCTGCGTCATGGCATATTCAGTATCAAGGTAGT TGGGTGGAAGCGCTAAACCGGGCGGGCTTTCTGGTCGCCGCCATGGATTTCCAGGGCCAC GGCCTATCTGAGGGTTGGCAAGGGAAACGTGGGAGTGTGAACCGGTTGGATGACCTCGCC CTGGACGTCATTCAGTTTATCACTATCATTCGCCGTCGCTGCCAATTCCTTCGCGGAGTG TACAGACACTGTGTGCACGATGGGAAGCATCGAAGTGGTTCAAGGGAGGTCAAGGAGGGT GCAGAACGGCGGCCAGACTCCGAGCGACAAACGAGCAGCAAGCCACGCCGCGGGATGCCA ACGAGCGAGATGGAGCCAAACGGTGGAGAAACGAAGGAACAGTCCACTCAGGAGAGCAAC GGAGGAATTGACAACGATGAGGAAAATCCTCCGATTTTTCTTCTGGGTGTATCTTTAGGT GGATGGGCAGCTGCCAGGACGATTCAGCTGCTCGGCGATCCTAAAGCTGTAGCTTCGCTC TTCTTAGTTTGTGACCCGAACGGGCCTCTGCCCCAGTTTTCCGGCATCCTGACGCCACAC GCAGCTGCCAGTCCACCTCACAGCGGTGCCTCTGCTGGTCCGCTTCCCTTCCCCATTGAA AAGCAACTGACGTCCTCTCTCTCAGCCGCCCGGGTTTCTCGGCAGCGACAGTCTTCCTCT TTTGCGAGTCTTGGCGCTTTGTCATCCGTTGGGCAAACGCAAACGTCCCTTACCACTGCA GGTGTATCGGGCTGCGTGCTTCTCTCGCCGATGTTGGATCTCTCTTTCGTGAAGAGTGCA ACAAAATATAATCTCTACCGACACCTGATGGTTCGTTTAGCAGAGTGGGCACCAAACATG GTTGTCTCCCGGCCTCTTCCCAATAAGGAATATCCCTACCTGGAGGCGCACATGCAAAGA GATAAGTATACGTATAAGGGTGGTTCGCGATTGCGAATGGTGAGGGAAATGTTTGAAGGA ACTGACACGATTCTCCATCCAGAGTGTCTCTCCCTCATATCTGAGAGTACCTGCGGGGCG CTCCTGGTCATGCACAATCTTCTCGACGGTGTCTGCGGAGTCGAGGGGAGTCTGCGTCTC TTCCATGGTGCCACAAGAATCAGAGACAAAAGCTTTCTTGCGGTGAATGCGTATGTGGAT GGCACTGCGTCTACTCAGCACCTGAATCCTGTGGAGTTCAGCACGGGCGCGCCAGCGGAA GTTTTGGCGCGATTCGGAACAGGCGCGCTGCCTGCACCGGCCTCTACACTCGCTGGATGT GGAAGCCCAGAAGTGCTTCAGCCGCTCCAGGAGACTAGAGAAGGTGTCAAGGCGGCGGGA GGAAGTATGGATCTCGAAGGACAGGCAGCGGCTCAGGATCCGCATGCAACGCCCTGTGCT GTGACCGCAGAGATTCGATGCGGTCTGGCGCACGACCTGTCGGAGGGCACAAGTGAAAGC GTTGAGCGAAAGAGGACGCCAAGCCAGCATCGTCACCAAGGCACAGAGGCCAGAGACTCA GTATCCGGTCCAGCGGTCGGTAAGGAAGAAGTGGGTACAGAGGAAGTTTGCGACGTCACT TCTTTGAATGCCCATGAAGGCGGGAAGTCGCAGCAGCAGGAGAATGTTGAGAGGGCAGTC CCCTTTCAGGCCACTGGGAGAGAGTTTTCTCTTGTGTTTTTCTGA
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  • Fasta :-

    MGNSQGNARMRSPNDISDVARGKDGWVELDRDEACRFVSLEAPITDAVEFPYDNKPEHGS FVNVQGLRIHTYFWYPQASQSRTSGAGLRESTSRPDASASPLLPQRHSSCSPTASFSTLG AGQAAPSSSLDRNRGPTKVAHAGFYPPHPSPSVTSVPRHALPTCNGRRAYTADHLGAASG SLPAPEQALLDKATAVCGARGVVLLLHGYCNHSRLAWLSKPLPPGHRRRDPTVVGYPTVS EALSVPAAVASNSSCRSEADEQSFDFSPAATLSTAGSWKNALEGTSEFKPDPPGRVASRS RAASLTAEEPAGGCDRTEGWVETVGDASVSASWHIQYQGSWVEALNRAGFLVAAMDFQGH GLSEGWQGKRGSVNRLDDLALDVIQFITIIRRRCQFLRGVYRHCVHDGKHRSGSREVKEG AERRPDSERQTSSKPRRGMPTSEMEPNGGETKEQSTQESNGGIDNDEENPPIFLLGVSLG GWAAARTIQLLGDPKAVASLFLVCDPNGPLPQFSGILTPHAAASPPHSGASAGPLPFPIE KQLTSSLSAARVSRQRQSSSFASLGALSSVGQTQTSLTTAGVSGCVLLSPMLDLSFVKSA TKYNLYRHLMVRLAEWAPNMVVSRPLPNKEYPYLEAHMQRDKYTYKGGSRLRMVREMFEG TDTILHPECLSLISESTCGALLVMHNLLDGVCGVEGSLRLFHGATRIRDKSFLAVNAYVD GTASTQHLNPVEFSTGAPAEVLARFGTGALPAPASTLAGCGSPEVLQPLQETREGVKAAG GSMDLEGQAAAQDPHATPCAVTAEIRCGLAHDLSEGTSESVERKRTPSQHRHQGTEARDS VSGPAVGKEEVGTEEVCDVTSLNAHEGGKSQQQENVERAVPFQATGREFSLVFF

    No Results
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IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
NCLIV_04657091 SGLRESTSRP0.995unspNCLIV_04657091 SGLRESTSRP0.995unspNCLIV_04657091 SGLRESTSRP0.995unspNCLIV_04657092 TLRESTSRPD0.993unspNCLIV_046570304 SSRAASLTAE0.995unspNCLIV_046570414 SHRSGSREVK0.995unspNCLIV_046570427 SRRPDSERQT0.997unspNCLIV_046570432 SERQTSSKPR0.997unspNCLIV_046570559 SQRQSSSFAS0.991unspNCLIV_046570828 SKRTPSQHRH0.995unspNCLIV_046570840 SEARDSVSGP0.997unspNCLIV_04657012 SARMRSPNDI0.994unspNCLIV_04657084 SQSRTSGAGL0.996unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India