NCLIV_048960 | hypothetical protein

  • Computed_GO_Component_IDs:        

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  • Computed_GO_Function_IDs:        

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_IDPredictionOTHERSPmTPCS_Position
NCLIV_048960OTHER0.9970430.0029460.000011
No Results

  • Fasta :-

    >NCLIV_048960 MEDAESEKSVAPNRCATMCIFGCLAAMGCRSSIVRRLAFYPPQPAGYSIGPHGQLYTFDG TSESHRPASQTQSAPPDSINSASGAAAAQPDNPPAQQLQRESMQQLLQRTGLPERLKTLS IPCGRNVNLAGLFIYHPLSPSSSSTRPTSDTGTGQGPLGSAIHAEETKANETDGAAGPLA EGADGCDEQVMHDSAKRLPCIVFSHGNSTDIGFMFGLYYRLAYKCRVNVLAYDYSGYGCS GGKTSEKALYKNIRAVWTYATQVLHVPPRQLILYGHSVGSAPCCDLAMREKTFPVGGVIL HSSIASGLRLFFDDINKSPWFDAFPNVEKLRKVKRTPILIIHGQLDRQDAYYKHVGDFVH FCNLWTTSCRGN
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NCLIV_048960.fa Sequence name : NCLIV_048960 Sequence length : 372 VALUES OF COMPUTED PARAMETERS Coef20 : 3.906 CoefTot : 0.000 ChDiff : 3 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.476 1.635 0.452 0.564 MesoH : -0.329 0.325 -0.268 0.220 MuHd_075 : 23.919 17.735 8.951 4.595 MuHd_095 : 14.117 7.923 3.852 2.487 MuHd_100 : 13.445 9.406 3.601 2.373 MuHd_105 : 7.015 6.933 1.613 1.125 Hmax_075 : 2.333 7.117 0.430 2.018 Hmax_095 : 1.200 4.300 -0.704 1.410 Hmax_100 : 3.000 4.400 -0.835 1.430 Hmax_105 : -7.400 1.000 -3.624 -0.222 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9791 0.0209 DFMC : 0.9679 0.0321
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 372 NCLIV_048960 MEDAESEKSVAPNRCATMCIFGCLAAMGCRSSIVRRLAFYPPQPAGYSIGPHGQLYTFDGTSESHRPASQTQSAPPDSIN 80 SASGAAAAQPDNPPAQQLQRESMQQLLQRTGLPERLKTLSIPCGRNVNLAGLFIYHPLSPSSSSTRPTSDTGTGQGPLGS 160 AIHAEETKANETDGAAGPLAEGADGCDEQVMHDSAKRLPCIVFSHGNSTDIGFMFGLYYRLAYKCRVNVLAYDYSGYGCS 240 GGKTSEKALYKNIRAVWTYATQVLHVPPRQLILYGHSVGSAPCCDLAMREKTFPVGGVILHSSIASGLRLFFDDINKSPW 320 FDAFPNVEKLRKVKRTPILIIHGQLDRQDAYYKHVGDFVHFCNLWTTSCRGN 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 .................................................... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NCLIV_048960 8 EDAESEK|SV 0.114 . NCLIV_048960 14 KSVAPNR|CA 0.113 . NCLIV_048960 30 LAAMGCR|SS 0.109 . NCLIV_048960 35 CRSSIVR|RL 0.103 . NCLIV_048960 36 RSSIVRR|LA 0.189 . NCLIV_048960 66 GTSESHR|PA 0.178 . NCLIV_048960 100 PAQQLQR|ES 0.112 . NCLIV_048960 109 MQQLLQR|TG 0.078 . NCLIV_048960 115 RTGLPER|LK 0.075 . NCLIV_048960 117 GLPERLK|TL 0.057 . NCLIV_048960 125 LSIPCGR|NV 0.106 . NCLIV_048960 146 PSSSSTR|PT 0.172 . NCLIV_048960 168 IHAEETK|AN 0.074 . NCLIV_048960 196 VMHDSAK|RL 0.073 . NCLIV_048960 197 MHDSAKR|LP 0.140 . NCLIV_048960 220 MFGLYYR|LA 0.091 . NCLIV_048960 224 YYRLAYK|CR 0.056 . NCLIV_048960 226 RLAYKCR|VN 0.089 . NCLIV_048960 243 YGCSGGK|TS 0.061 . NCLIV_048960 247 GGKTSEK|AL 0.075 . NCLIV_048960 251 SEKALYK|NI 0.070 . NCLIV_048960 254 ALYKNIR|AV 0.171 . NCLIV_048960 269 VLHVPPR|QL 0.124 . NCLIV_048960 289 CCDLAMR|EK 0.069 . NCLIV_048960 291 DLAMREK|TF 0.063 . NCLIV_048960 309 SIASGLR|LF 0.081 . NCLIV_048960 317 FFDDINK|SP 0.056 . NCLIV_048960 329 AFPNVEK|LR 0.054 . NCLIV_048960 331 PNVEKLR|KV 0.107 . NCLIV_048960 332 NVEKLRK|VK 0.067 . NCLIV_048960 334 EKLRKVK|RT 0.108 . NCLIV_048960 335 KLRKVKR|TP 0.213 . NCLIV_048960 347 IHGQLDR|QD 0.074 . NCLIV_048960 353 RQDAYYK|HV 0.093 . NCLIV_048960 370 LWTTSCR|GN 0.095 . ____________________________^_________________

  • Fasta :-

    >NCLIV_048960 ATGGAAGATGCGGAGTCCGAGAAGTCCGTGGCGCCGAACAGATGCGCGACGATGTGCATC TTCGGCTGCCTGGCGGCCATGGGGTGCCGCTCGTCCATCGTTCGCCGCCTAGCTTTCTAC CCGCCTCAGCCCGCTGGCTACTCAATTGGACCGCACGGCCAGCTGTACACGTTTGATGGG ACTTCTGAATCGCATCGACCGGCCAGCCAGACCCAATCGGCCCCGCCTGATAGTATCAAC AGTGCGTCTGGAGCGGCCGCTGCCCAGCCGGACAACCCGCCTGCTCAGCAGCTTCAGCGC GAGAGCATGCAGCAACTACTGCAGCGTACGGGACTGCCCGAGCGCTTGAAAACGCTGTCC ATTCCGTGTGGCAGGAACGTCAATCTTGCAGGGCTCTTCATCTACCATCCTCTCTCTCCT TCGTCTTCCTCAACAAGGCCTACCTCCGACACGGGGACCGGACAAGGCCCTCTGGGCTCA GCGATCCATGCAGAAGAGACCAAAGCGAACGAGACGGACGGAGCGGCGGGGCCGCTGGCT GAGGGAGCAGATGGGTGCGACGAGCAGGTGATGCACGATAGCGCAAAGCGCCTCCCGTGC ATCGTCTTCTCTCACGGGAACAGTACAGACATCGGCTTCATGTTTGGCCTCTATTATCGC CTCGCGTACAAGTGCCGAGTGAATGTGCTGGCGTACGACTACAGTGGATACGGTTGCAGT GGGGGAAAGACTTCAGAAAAAGCGTTGTACAAAAATATCCGAGCAGTCTGGACATACGCG ACTCAAGTGCTGCACGTGCCTCCTCGTCAGCTAATTTTGTATGGCCACAGCGTTGGCTCT GCTCCTTGTTGCGACCTGGCGATGCGAGAAAAAACCTTTCCAGTCGGTGGTGTTATCCTG CATTCGTCTATCGCATCTGGCCTGCGCTTGTTTTTCGACGACATTAACAAATCACCATGG TTTGACGCCTTCCCTAATGTTGAAAAGTTGAGGAAGGTCAAGAGAACGCCTATTCTGATT ATTCATGGGCAGCTCGACAGGCAGGACGCGTACTACAAGCACGTCGGAGACTTCGTTCAC TTCTGTAACTTATGGACGACGAGTTGCCGTGGAAATTGA
  • Download Fasta

  • Fasta :-

    MEDAESEKSVAPNRCATMCIFGCLAAMGCRSSIVRRLAFYPPQPAGYSIGPHGQLYTFDG TSESHRPASQTQSAPPDSINSASGAAAAQPDNPPAQQLQRESMQQLLQRTGLPERLKTLS IPCGRNVNLAGLFIYHPLSPSSSSTRPTSDTGTGQGPLGSAIHAEETKANETDGAAGPLA EGADGCDEQVMHDSAKRLPCIVFSHGNSTDIGFMFGLYYRLAYKCRVNVLAYDYSGYGCS GGKTSEKALYKNIRAVWTYATQVLHVPPRQLILYGHSVGSAPCCDLAMREKTFPVGGVIL HSSIASGLRLFFDDINKSPWFDAFPNVEKLRKVKRTPILIIHGQLDRQDAYYKHVGDFVH FCNLWTTSCRGN

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
NCLIV_048960144 SPSSSSTRPT0.993unspNCLIV_048960144 SPSSSSTRPT0.993unspNCLIV_048960144 SPSSSSTRPT0.993unspNCLIV_048960149 STRPTSDTGT0.996unspNCLIV_04896069 SHRPASQTQS0.993unspNCLIV_048960139 SYHPLSPSSS0.995unsp
No Results


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India