NCLIV_049420 | Serine/threonine protein phosphatase, related

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No Results
No Results

  • Fasta :-

    >NCLIV_049420 MCVHTLSLPRGALKKNLGVSAEAIPQESLGAAPPGQAAFASHTRGSEHGASSPVQRVPSR RPPSFSPPSPASAVSQEPRLSESSAVSADSVPSSLPSRSSSTLSPAPSSSGVWASLQSSH RIPVQMVGARAAVKSISVGNQTLLLALDTQTEGVRLFLSNSTACTQPPSLPRSASSSPLG AKASDRKLLSESTKRVESSAAAPAGRARERDGEAAAHATRGPEGDFVKILFKTLPFLRSR GKTRNSRVKGGQKRECYDPRRSGLAAWCLNRRQACNFLSDAPFQCRAETDADVAQAAPFS QHSDGVRVAELRLEGLDLLRLDLATPADSPAPPAFGESAAEPEGRKPPQVPSGAERRVEA ASEQSRAPIHEASIFPVKLVADRKSAFYDPYPGLDGVWGIAGPEFCCRNASLWSSTLHAL NVTSYAFDLNFPASNTTFSSSAAQAVPRRGGERGGMSWGSSPARSAPPASVPLSFLHLGV LEEDRTEVGGSAPGADAGGKLKGFATYDEAGRWTGPAWTAEERGEAKTDGENETEKTESA GEREGREEGLRGVAGQGETFERKREAPEQRDEKGGEASGNKKLDKRIGGEDIIWGQRIQT GNVWADSVAHFVSYDWQLCGHSLMDNSHMKDWMVTVDLSSECLVVPRPLWLSMRAWMRPA LNETSPLCTLDDDFSSFVPAHALAASVAAEGSVFRRMCPLRGGRAHPKESREAAARPPLP VLSFSLRDTTGVVFDRGDSPQVQTETPAPRVELPLEQLAVSSPEAGPGEALCVVPQPHSL LSREGRTVRLGTRAVAAFHFIVDQKGWRVGLLPKTLPLPSSNEACAAQAACRGEQTYVSS TNECVDPLCSERLLFSLNDETKICELSPTVVPAAVTVVLLLLGLETAVVCFQWANVLKAR TLT
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NCLIV_049420.fa Sequence name : NCLIV_049420 Sequence length : 903 VALUES OF COMPUTED PARAMETERS Coef20 : 3.991 CoefTot : -0.223 ChDiff : -2 ZoneTo : 21 KR : 3 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.953 2.459 0.398 0.756 MesoH : -0.075 0.652 -0.183 0.246 MuHd_075 : 33.913 24.706 11.034 8.298 MuHd_095 : 18.174 11.683 5.287 3.400 MuHd_100 : 15.637 12.564 5.936 2.936 MuHd_105 : 15.351 13.945 5.996 3.409 Hmax_075 : 15.200 19.100 4.544 5.320 Hmax_095 : 8.750 8.750 1.128 3.369 Hmax_100 : 6.600 12.000 1.196 2.410 Hmax_105 : 2.400 12.017 0.498 2.230 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9371 0.0629 DFMC : 0.8825 0.1175
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 903 NCLIV_049420 MCVHTLSLPRGALKKNLGVSAEAIPQESLGAAPPGQAAFASHTRGSEHGASSPVQRVPSRRPPSFSPPSPASAVSQEPRL 80 SESSAVSADSVPSSLPSRSSSTLSPAPSSSGVWASLQSSHRIPVQMVGARAAVKSISVGNQTLLLALDTQTEGVRLFLSN 160 STACTQPPSLPRSASSSPLGAKASDRKLLSESTKRVESSAAAPAGRARERDGEAAAHATRGPEGDFVKILFKTLPFLRSR 240 GKTRNSRVKGGQKRECYDPRRSGLAAWCLNRRQACNFLSDAPFQCRAETDADVAQAAPFSQHSDGVRVAELRLEGLDLLR 320 LDLATPADSPAPPAFGESAAEPEGRKPPQVPSGAERRVEAASEQSRAPIHEASIFPVKLVADRKSAFYDPYPGLDGVWGI 400 AGPEFCCRNASLWSSTLHALNVTSYAFDLNFPASNTTFSSSAAQAVPRRGGERGGMSWGSSPARSAPPASVPLSFLHLGV 480 LEEDRTEVGGSAPGADAGGKLKGFATYDEAGRWTGPAWTAEERGEAKTDGENETEKTESAGEREGREEGLRGVAGQGETF 560 ERKREAPEQRDEKGGEASGNKKLDKRIGGEDIIWGQRIQTGNVWADSVAHFVSYDWQLCGHSLMDNSHMKDWMVTVDLSS 640 ECLVVPRPLWLSMRAWMRPALNETSPLCTLDDDFSSFVPAHALAASVAAEGSVFRRMCPLRGGRAHPKESREAAARPPLP 720 VLSFSLRDTTGVVFDRGDSPQVQTETPAPRVELPLEQLAVSSPEAGPGEALCVVPQPHSLLSREGRTVRLGTRAVAAFHF 800 IVDQKGWRVGLLPKTLPLPSSNEACAAQAACRGEQTYVSSTNECVDPLCSERLLFSLNDETKICELSPTVVPAAVTVVLL 880 LLGLETAVVCFQWANVLKARTLT 960 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 .................................................................P.............. 800 ................................................................................ 880 ....................... 960 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ NCLIV_049420 10 HTLSLPR|GA 0.089 . NCLIV_049420 14 LPRGALK|KN 0.061 . NCLIV_049420 15 PRGALKK|NL 0.141 . NCLIV_049420 44 AFASHTR|GS 0.125 . NCLIV_049420 56 ASSPVQR|VP 0.143 . NCLIV_049420 60 VQRVPSR|RP 0.069 . NCLIV_049420 61 QRVPSRR|PP 0.197 . NCLIV_049420 79 AVSQEPR|LS 0.110 . NCLIV_049420 98 PSSLPSR|SS 0.163 . NCLIV_049420 121 SLQSSHR|IP 0.089 . NCLIV_049420 130 VQMVGAR|AA 0.135 . NCLIV_049420 134 GARAAVK|SI 0.128 . NCLIV_049420 155 TQTEGVR|LF 0.062 . NCLIV_049420 172 QPPSLPR|SA 0.179 . NCLIV_049420 182 SSPLGAK|AS 0.073 . NCLIV_049420 186 GAKASDR|KL 0.078 . NCLIV_049420 187 AKASDRK|LL 0.091 . NCLIV_049420 194 LLSESTK|RV 0.093 . NCLIV_049420 195 LSESTKR|VE 0.117 . NCLIV_049420 206 AAAPAGR|AR 0.098 . NCLIV_049420 208 APAGRAR|ER 0.129 . NCLIV_049420 210 AGRARER|DG 0.146 . NCLIV_049420 220 AAAHATR|GP 0.091 . NCLIV_049420 228 PEGDFVK|IL 0.071 . NCLIV_049420 232 FVKILFK|TL 0.053 . NCLIV_049420 238 KTLPFLR|SR 0.130 . NCLIV_049420 240 LPFLRSR|GK 0.082 . NCLIV_049420 242 FLRSRGK|TR 0.060 . NCLIV_049420 244 RSRGKTR|NS 0.135 . NCLIV_049420 247 GKTRNSR|VK 0.281 . NCLIV_049420 249 TRNSRVK|GG 0.083 . NCLIV_049420 253 RVKGGQK|RE 0.053 . NCLIV_049420 254 VKGGQKR|EC 0.196 . NCLIV_049420 260 RECYDPR|RS 0.100 . NCLIV_049420 261 ECYDPRR|SG 0.137 . NCLIV_049420 271 AAWCLNR|RQ 0.067 . NCLIV_049420 272 AWCLNRR|QA 0.140 . NCLIV_049420 286 DAPFQCR|AE 0.090 . NCLIV_049420 307 QHSDGVR|VA 0.105 . NCLIV_049420 312 VRVAELR|LE 0.079 . NCLIV_049420 320 EGLDLLR|LD 0.062 . NCLIV_049420 345 AAEPEGR|KP 0.095 . NCLIV_049420 346 AEPEGRK|PP 0.058 . NCLIV_049420 356 VPSGAER|RV 0.177 . NCLIV_049420 357 PSGAERR|VE 0.151 . NCLIV_049420 366 AASEQSR|AP 0.104 . NCLIV_049420 378 ASIFPVK|LV 0.074 . NCLIV_049420 383 VKLVADR|KS 0.070 . NCLIV_049420 384 KLVADRK|SA 0.108 . NCLIV_049420 408 GPEFCCR|NA 0.105 . NCLIV_049420 448 AAQAVPR|RG 0.114 . NCLIV_049420 449 AQAVPRR|GG 0.235 . NCLIV_049420 453 PRRGGER|GG 0.099 . NCLIV_049420 464 WGSSPAR|SA 0.185 . NCLIV_049420 485 GVLEEDR|TE 0.062 . NCLIV_049420 500 GADAGGK|LK 0.064 . NCLIV_049420 502 DAGGKLK|GF 0.067 . NCLIV_049420 512 TYDEAGR|WT 0.113 . NCLIV_049420 523 AWTAEER|GE 0.073 . NCLIV_049420 527 EERGEAK|TD 0.075 . NCLIV_049420 536 GENETEK|TE 0.082 . NCLIV_049420 543 TESAGER|EG 0.104 . NCLIV_049420 546 AGEREGR|EE 0.209 . NCLIV_049420 551 GREEGLR|GV 0.161 . NCLIV_049420 562 QGETFER|KR 0.085 . NCLIV_049420 563 GETFERK|RE 0.076 . NCLIV_049420 564 ETFERKR|EA 0.199 . NCLIV_049420 570 REAPEQR|DE 0.176 . NCLIV_049420 573 PEQRDEK|GG 0.148 . NCLIV_049420 581 GEASGNK|KL 0.066 . NCLIV_049420 582 EASGNKK|LD 0.094 . NCLIV_049420 585 GNKKLDK|RI 0.079 . NCLIV_049420 586 NKKLDKR|IG 0.166 . NCLIV_049420 597 DIIWGQR|IQ 0.068 . NCLIV_049420 630 MDNSHMK|DW 0.093 . NCLIV_049420 647 ECLVVPR|PL 0.089 . NCLIV_049420 654 PLWLSMR|AW 0.084 . NCLIV_049420 658 SMRAWMR|PA 0.099 . NCLIV_049420 695 AEGSVFR|RM 0.085 . NCLIV_049420 696 EGSVFRR|MC 0.136 . NCLIV_049420 701 RRMCPLR|GG 0.120 . NCLIV_049420 704 CPLRGGR|AH 0.159 . NCLIV_049420 708 GGRAHPK|ES 0.071 . NCLIV_049420 711 AHPKESR|EA 0.089 . NCLIV_049420 716 SREAAAR|PP 0.104 . NCLIV_049420 727 VLSFSLR|DT 0.166 . NCLIV_049420 736 TGVVFDR|GD 0.150 . NCLIV_049420 750 TETPAPR|VE 0.076 . NCLIV_049420 783 PHSLLSR|EG 0.097 . NCLIV_049420 786 LLSREGR|TV 0.585 *ProP* NCLIV_049420 789 REGRTVR|LG 0.186 . NCLIV_049420 793 TVRLGTR|AV 0.109 . NCLIV_049420 805 HFIVDQK|GW 0.072 . NCLIV_049420 808 VDQKGWR|VG 0.059 . NCLIV_049420 814 RVGLLPK|TL 0.053 . NCLIV_049420 832 AAQAACR|GE 0.094 . NCLIV_049420 852 DPLCSER|LL 0.075 . NCLIV_049420 862 SLNDETK|IC 0.071 . NCLIV_049420 898 QWANVLK|AR 0.063 . NCLIV_049420 900 ANVLKAR|TL 0.113 . ____________________________^_________________

  • Fasta :-

    >NCLIV_049420 ATGTGTGTCCATACGCTTTCTCTGCCAAGAGGTGCTCTGAAGAAGAACCTCGGAGTTTCA GCAGAGGCGATACCGCAGGAAAGCCTGGGAGCCGCGCCTCCAGGCCAGGCTGCCTTCGCC TCCCACACTCGAGGCAGCGAACATGGAGCGTCTTCGCCTGTTCAACGGGTGCCTTCTCGC CGTCCTCCTTCCTTTTCCCCACCTTCCCCGGCCTCCGCTGTTTCTCAAGAGCCTCGTCTC TCTGAGTCGTCCGCTGTCTCTGCTGATTCTGTCCCTTCGTCTCTGCCTTCTCGCTCTTCG TCCACGCTGTCTCCGGCGCCTTCTTCTTCCGGCGTGTGGGCTTCGCTCCAGTCCTCTCAT CGAATCCCCGTCCAGATGGTGGGAGCGCGCGCCGCCGTCAAGTCGATCTCAGTCGGCAAC CAGACTCTCCTTCTCGCTTTAGACACGCAGACAGAAGGGGTGCGCCTCTTTCTGTCCAAT TCCACTGCGTGCACGCAGCCCCCCAGTCTCCCGCGCTCGGCCTCAAGCAGCCCACTGGGT GCCAAGGCGAGCGACCGAAAGCTGCTGTCCGAGTCGACAAAGCGGGTCGAGTCCTCCGCG GCGGCGCCTGCCGGGAGAGCCCGAGAGCGGGACGGAGAGGCTGCCGCCCACGCGACACGG GGCCCGGAAGGAGACTTTGTAAAGATCCTCTTCAAAACACTGCCATTTCTGCGGAGCCGA GGGAAGACGCGGAACTCCCGAGTCAAGGGCGGACAGAAACGCGAGTGCTACGATCCCCGA CGCTCCGGCCTCGCAGCCTGGTGCCTCAACCGCCGACAGGCCTGCAACTTTCTAAGCGAC GCCCCTTTCCAGTGCCGCGCGGAGACTGACGCCGACGTAGCGCAAGCAGCCCCCTTCTCT CAGCACTCGGACGGCGTGCGCGTCGCCGAGCTGCGTCTCGAAGGCCTCGACCTGCTTCGC CTCGACCTCGCCACGCCCGCAGATTCGCCCGCTCCGCCGGCGTTTGGGGAGTCAGCGGCC GAGCCCGAAGGCAGGAAACCGCCGCAAGTTCCGAGCGGCGCGGAGCGGAGAGTGGAAGCT GCGTCGGAGCAGAGTCGCGCGCCCATCCACGAGGCGAGCATCTTTCCAGTCAAGCTCGTG GCTGACAGGAAGTCTGCGTTTTACGATCCCTACCCTGGGCTCGACGGCGTGTGGGGCATT GCAGGCCCCGAGTTTTGTTGCCGCAATGCGTCGCTCTGGAGTTCAACGCTTCACGCCCTC AATGTGACGTCGTATGCTTTCGACCTGAACTTTCCTGCTTCCAACACCACCTTTTCCTCG TCGGCCGCACAGGCCGTTCCGCGGAGGGGCGGGGAACGCGGCGGCATGTCTTGGGGGAGC TCACCTGCGCGCTCGGCTCCCCCGGCCTCCGTGCCTCTCTCCTTTCTCCACTTGGGCGTT CTGGAAGAAGACCGAACGGAAGTGGGCGGCTCCGCCCCCGGCGCAGACGCAGGCGGGAAG CTCAAAGGCTTCGCGACTTACGACGAAGCGGGAAGGTGGACCGGACCAGCGTGGACAGCA GAAGAGCGAGGCGAAGCAAAGACCGACGGCGAGAACGAAACAGAGAAAACCGAGAGCGCC GGAGAGAGAGAGGGGAGAGAGGAGGGACTCAGGGGTGTCGCCGGACAGGGGGAGACGTTC GAAAGGAAGCGCGAGGCGCCGGAGCAGAGAGACGAGAAGGGAGGTGAAGCGTCAGGGAAC AAGAAACTCGACAAGAGAATCGGAGGGGAAGATATCATTTGGGGCCAGCGAATTCAAACG GGCAATGTGTGGGCGGACTCCGTCGCACACTTTGTCTCCTACGACTGGCAGCTCTGCGGG CACAGCCTGATGGACAACTCGCACATGAAGGATTGGATGGTGACCGTCGACCTCAGCTCC GAGTGTCTAGTCGTCCCTCGGCCTCTGTGGCTGAGCATGCGGGCGTGGATGAGGCCCGCA CTGAACGAGACGAGTCCGCTGTGTACGCTGGACGACGACTTCTCTTCCTTCGTGCCTGCA CACGCCCTCGCCGCTTCGGTCGCAGCTGAGGGGAGCGTCTTTCGGCGGATGTGCCCGCTT CGAGGCGGGAGAGCGCACCCAAAAGAAAGTCGCGAGGCTGCGGCGAGGCCGCCGCTCCCA GTTCTCTCCTTCTCGCTGCGCGACACCACCGGCGTCGTCTTCGACCGCGGGGACTCGCCG CAGGTGCAAACGGAGACACCTGCCCCCCGCGTGGAGCTGCCGCTCGAACAGCTGGCCGTG TCGAGTCCCGAGGCGGGACCCGGCGAGGCTCTGTGCGTCGTTCCGCAGCCCCACAGTCTC CTGTCTAGAGAGGGACGAACGGTGCGCCTCGGCACGCGAGCCGTCGCCGCGTTCCACTTC ATTGTGGACCAGAAGGGTTGGCGTGTGGGGCTCCTCCCTAAAACGCTTCCGCTGCCTTCC TCCAACGAAGCGTGCGCAGCCCAGGCGGCGTGCAGGGGGGAACAGACGTATGTTTCGTCG ACGAACGAGTGCGTGGACCCTCTATGCAGCGAGAGGCTGCTTTTTTCTTTGAACGACGAA ACCAAAATCTGCGAACTCTCCCCCACAGTCGTCCCTGCGGCCGTTACAGTTGTGCTGCTC CTCCTCGGGCTCGAGACGGCTGTTGTCTGCTTTCAGTGGGCGAATGTGTTGAAGGCGCGA ACACTCACGTGA
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  • Fasta :-

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IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
NCLIV_049420177 SSASSSPLGA0.99unspNCLIV_049420177 SSASSSPLGA0.99unspNCLIV_049420177 SSASSSPLGA0.99unspNCLIV_049420192 SLLSESTKRV0.991unspNCLIV_049420198 SKRVESSAAA0.991unspNCLIV_049420539 SEKTESAGER0.994unspNCLIV_049420725 SVLSFSLRDT0.996unspNCLIV_04942046 SHTRGSEHGA0.99unspNCLIV_04942081 SEPRLSESSA0.992unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India