NCLIV_049890 | putative ubiquitin-conjugating enzyme

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0005515      

  • Computed_GO_Functions:  protein binding      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
NCLIV_049890OTHER0.9941670.0001600.005674
No Results

  • Fasta :-

    >NCLIV_049890 MAATQARGTPREHARLLKELADIQQLQRAQSGSPDSASNSAGAHGGVSAQVVDGDIHRWR GFIAGPLGTPYEGGHFTLDIVIPPDYPYNPPKMKFVTKIWHPNISSQTGAICLDILKHEW SPALTIRTALLSIQAMLADPVPTDPQDAEVAKMMMENHPLFVKTAKLWTETFAKEAQDSQ EDKVRKLTEMGFAEDQAREALRKHDWDETMALNSLVEGSDNTEKDTGKLAKEHRREAEKR RAQIPPAQLKNLGLSTVKRISKTRRSWFLILSSMIHSSALEISQTYSKCQGAA
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NCLIV_049890.fa Sequence name : NCLIV_049890 Sequence length : 293 VALUES OF COMPUTED PARAMETERS Coef20 : 4.099 CoefTot : 0.035 ChDiff : 1 ZoneTo : 11 KR : 2 DE : 0 CleavSite : 13 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.182 1.265 0.020 0.514 MesoH : -0.363 0.169 -0.390 0.245 MuHd_075 : 13.102 5.780 1.088 2.116 MuHd_095 : 39.453 15.167 6.516 8.647 MuHd_100 : 37.935 17.430 7.655 8.720 MuHd_105 : 32.658 16.434 7.657 7.538 Hmax_075 : -4.000 2.800 -3.251 0.680 Hmax_095 : 5.512 4.988 -1.899 2.433 Hmax_100 : 6.800 6.200 -0.943 3.300 Hmax_105 : 6.800 7.467 -0.943 3.687 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.4923 0.5077 DFMC : 0.5186 0.4814
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 293 NCLIV_049890 MAATQARGTPREHARLLKELADIQQLQRAQSGSPDSASNSAGAHGGVSAQVVDGDIHRWRGFIAGPLGTPYEGGHFTLDI 80 VIPPDYPYNPPKMKFVTKIWHPNISSQTGAICLDILKHEWSPALTIRTALLSIQAMLADPVPTDPQDAEVAKMMMENHPL 160 FVKTAKLWTETFAKEAQDSQEDKVRKLTEMGFAEDQAREALRKHDWDETMALNSLVEGSDNTEKDTGKLAKEHRREAEKR 240 RAQIPPAQLKNLGLSTVKRISKTRRSWFLILSSMIHSSALEISQTYSKCQGAA 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ..................................................... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NCLIV_049890 7 MAATQAR|GT 0.124 . NCLIV_049890 11 QARGTPR|EH 0.095 . NCLIV_049890 15 TPREHAR|LL 0.128 . NCLIV_049890 18 EHARLLK|EL 0.142 . NCLIV_049890 28 DIQQLQR|AQ 0.091 . NCLIV_049890 58 VDGDIHR|WR 0.083 . NCLIV_049890 60 GDIHRWR|GF 0.142 . NCLIV_049890 92 YPYNPPK|MK 0.076 . NCLIV_049890 94 YNPPKMK|FV 0.107 . NCLIV_049890 98 KMKFVTK|IW 0.089 . NCLIV_049890 117 ICLDILK|HE 0.052 . NCLIV_049890 127 SPALTIR|TA 0.124 . NCLIV_049890 152 QDAEVAK|MM 0.077 . NCLIV_049890 163 NHPLFVK|TA 0.059 . NCLIV_049890 166 LFVKTAK|LW 0.067 . NCLIV_049890 174 WTETFAK|EA 0.080 . NCLIV_049890 183 QDSQEDK|VR 0.069 . NCLIV_049890 185 SQEDKVR|KL 0.117 . NCLIV_049890 186 QEDKVRK|LT 0.101 . NCLIV_049890 198 FAEDQAR|EA 0.099 . NCLIV_049890 202 QAREALR|KH 0.108 . NCLIV_049890 203 AREALRK|HD 0.103 . NCLIV_049890 224 GSDNTEK|DT 0.081 . NCLIV_049890 228 TEKDTGK|LA 0.070 . NCLIV_049890 231 DTGKLAK|EH 0.064 . NCLIV_049890 234 KLAKEHR|RE 0.096 . NCLIV_049890 235 LAKEHRR|EA 0.244 . NCLIV_049890 239 HRREAEK|RR 0.068 . NCLIV_049890 240 RREAEKR|RA 0.252 . NCLIV_049890 241 REAEKRR|AQ 0.146 . NCLIV_049890 250 IPPAQLK|NL 0.066 . NCLIV_049890 258 LGLSTVK|RI 0.061 . NCLIV_049890 259 GLSTVKR|IS 0.271 . NCLIV_049890 262 TVKRISK|TR 0.091 . NCLIV_049890 264 KRISKTR|RS 0.093 . NCLIV_049890 265 RISKTRR|SW 0.472 . NCLIV_049890 288 ISQTYSK|CQ 0.074 . ____________________________^_________________

  • Fasta :-

    >NCLIV_049890 ATGGCAGCGACGCAAGCGCGAGGCACGCCGCGGGAGCATGCACGCCTCTTGAAAGAGTTG GCGGACATTCAGCAGCTGCAGCGAGCTCAGAGCGGCTCGCCCGATTCGGCTTCGAATTCC GCAGGAGCTCACGGCGGGGTGTCTGCGCAGGTTGTCGACGGCGACATCCACAGATGGCGA GGGTTCATCGCAGGGCCTCTCGGCACGCCCTACGAGGGCGGGCACTTCACTCTGGACATT GTCATCCCTCCGGACTACCCGTACAATCCCCCCAAGATGAAGTTTGTCACGAAGATATGG CATCCAAACATCTCCTCTCAAACAGGGGCGATTTGTTTGGATATCTTGAAGCATGAATGG TCACCTGCGTTGACAATCCGAACGGCTCTTCTCTCGATTCAGGCGATGCTTGCTGACCCT GTTCCAACGGATCCTCAAGATGCAGAGGTCGCAAAGATGATGATGGAGAATCACCCTCTC TTCGTGAAAACAGCCAAGTTGTGGACGGAGACGTTTGCGAAGGAGGCGCAGGACTCGCAA GAAGATAAAGTCAGAAAGTTGACTGAGATGGGATTTGCGGAGGACCAAGCGCGGGAGGCT CTGCGGAAACACGACTGGGATGAGACCATGGCTCTCAACTCCCTGGTCGAGGGCTCAGAC AACACAGAAAAAGACACGGGGAAACTCGCGAAAGAGCACAGAAGGGAGGCTGAGAAGCGC AGGGCGCAAATCCCTCCTGCACAGCTAAAGAATCTGGGTCTGTCGACGGTCAAACGCATC AGCAAAACACGCCGTTCTTGGTTCCTTATTCTCTCGAGCATGATCCATTCTTCGGCTTTG GAAATCTCGCAGACCTACAGCAAATGTCAGGGGGCGGCATGA
  • Download Fasta

  • Fasta :-

    MAATQARGTPREHARLLKELADIQQLQRAQSGSPDSASNSAGAHGGVSAQVVDGDIHRWR GFIAGPLGTPYEGGHFTLDIVIPPDYPYNPPKMKFVTKIWHPNISSQTGAICLDILKHEW SPALTIRTALLSIQAMLADPVPTDPQDAEVAKMMMENHPLFVKTAKLWTETFAKEAQDSQ EDKVRKLTEMGFAEDQAREALRKHDWDETMALNSLVEGSDNTEKDTGKLAKEHRREAEKR RAQIPPAQLKNLGLSTVKRISKTRRSWFLILSSMIHSSALEISQTYSKCQGAA

  • title: active site cysteine
  • coordinates: C112
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
NCLIV_049890261 SVKRISKTRR0.996unspNCLIV_049890261 SVKRISKTRR0.996unspNCLIV_049890261 SVKRISKTRR0.996unspNCLIV_0498909 TQARGTPREH0.996unspNCLIV_049890179 SEAQDSQEDK0.998unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India