NCLIV_051010 | putative signal peptide peptidase domain-containing protein

  • Computed_GO_Component_IDs:  GO:0016021      

  • Computed_GO_Components:  integral component of membrane      

  • Computed_GO_Function_IDs:  GO:0004190      

  • Computed_GO_Functions:  aspartic-type endopeptidase activity      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
NCLIV_051010OTHER0.9989610.0009400.000099
No Results

  • Fasta :-

    >NCLIV_051010 MGKTKTAATPDAHAPERRLFYGCFALLGATMAISHFVALPVLLQMIVYTVSIVYIGSHAS LKQNEVDEVTGERSNKGEAMNHTDAMLFPVFGSLALCSLYIAYKFLDASWVNFLLTLYLT AIGLVALGETLHVALVPLFPDWANDPSRISFKFCLPHIPFICPRPELSTPSAKEAFEASC TYRLSYSQLGAYILAAGLSALWLWKKHWAIHNLLGVAFCIQASRREKKKRRSRGRTEKGR GAGSIEDLKRASGVYLELRFFSRSWSVSGRTSPARAISLVSVGNFTVATILLSGLFIYDI FWVFGTDVMVTVAKSFEGPAKLIFPVNLDPWQHSILGLGDIVIPGVFISMCLRFDYWLAT ASLANASEKKTAVETSIDIHQKFSKFYFFVVLVFYEFGLLTTGVIMLVFQHPQPALLYIV PFCLFSLFGAAALNGQVKEVLAYREDEEEKPAEVEGEAEPTEEKKSK
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NCLIV_051010.fa Sequence name : NCLIV_051010 Sequence length : 467 VALUES OF COMPUTED PARAMETERS Coef20 : 3.767 CoefTot : -0.447 ChDiff : 3 ZoneTo : 10 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.088 2.188 0.428 0.784 MesoH : 0.733 1.145 -0.044 0.519 MuHd_075 : 17.139 2.621 3.541 3.445 MuHd_095 : 13.751 8.565 3.245 3.510 MuHd_100 : 15.748 9.046 3.554 3.662 MuHd_105 : 10.160 7.033 2.643 2.378 Hmax_075 : -3.500 -4.783 -4.174 -0.058 Hmax_095 : -8.000 -3.300 -4.478 0.310 Hmax_100 : -8.200 -3.000 -4.691 0.070 Hmax_105 : -0.200 -1.100 -2.700 0.930 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9369 0.0631 DFMC : 0.9279 0.0721
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 467 NCLIV_051010 MGKTKTAATPDAHAPERRLFYGCFALLGATMAISHFVALPVLLQMIVYTVSIVYIGSHASLKQNEVDEVTGERSNKGEAM 80 NHTDAMLFPVFGSLALCSLYIAYKFLDASWVNFLLTLYLTAIGLVALGETLHVALVPLFPDWANDPSRISFKFCLPHIPF 160 ICPRPELSTPSAKEAFEASCTYRLSYSQLGAYILAAGLSALWLWKKHWAIHNLLGVAFCIQASRREKKKRRSRGRTEKGR 240 GAGSIEDLKRASGVYLELRFFSRSWSVSGRTSPARAISLVSVGNFTVATILLSGLFIYDIFWVFGTDVMVTVAKSFEGPA 320 KLIFPVNLDPWQHSILGLGDIVIPGVFISMCLRFDYWLATASLANASEKKTAVETSIDIHQKFSKFYFFVVLVFYEFGLL 400 TTGVIMLVFQHPQPALLYIVPFCLFSLFGAAALNGQVKEVLAYREDEEEKPAEVEGEAEPTEEKKSK 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NCLIV_051010 3 ----MGK|TK 0.069 . NCLIV_051010 5 --MGKTK|TA 0.070 . NCLIV_051010 17 DAHAPER|RL 0.097 . NCLIV_051010 18 AHAPERR|LF 0.153 . NCLIV_051010 62 GSHASLK|QN 0.083 . NCLIV_051010 73 DEVTGER|SN 0.096 . NCLIV_051010 76 TGERSNK|GE 0.135 . NCLIV_051010 104 SLYIAYK|FL 0.078 . NCLIV_051010 148 WANDPSR|IS 0.090 . NCLIV_051010 152 PSRISFK|FC 0.083 . NCLIV_051010 164 IPFICPR|PE 0.083 . NCLIV_051010 173 LSTPSAK|EA 0.077 . NCLIV_051010 183 EASCTYR|LS 0.116 . NCLIV_051010 205 SALWLWK|KH 0.062 . NCLIV_051010 206 ALWLWKK|HW 0.089 . NCLIV_051010 224 FCIQASR|RE 0.073 . NCLIV_051010 225 CIQASRR|EK 0.139 . NCLIV_051010 227 QASRREK|KK 0.149 . NCLIV_051010 228 ASRREKK|KR 0.319 . NCLIV_051010 229 SRREKKK|RR 0.171 . NCLIV_051010 230 RREKKKR|RS 0.252 . NCLIV_051010 231 REKKKRR|SR 0.390 . NCLIV_051010 233 KKKRRSR|GR 0.315 . NCLIV_051010 235 KRRSRGR|TE 0.111 . NCLIV_051010 238 SRGRTEK|GR 0.231 . NCLIV_051010 240 GRTEKGR|GA 0.221 . NCLIV_051010 249 GSIEDLK|RA 0.064 . NCLIV_051010 250 SIEDLKR|AS 0.229 . NCLIV_051010 259 GVYLELR|FF 0.099 . NCLIV_051010 263 ELRFFSR|SW 0.227 . NCLIV_051010 270 SWSVSGR|TS 0.111 . NCLIV_051010 275 GRTSPAR|AI 0.124 . NCLIV_051010 314 VMVTVAK|SF 0.084 . NCLIV_051010 321 SFEGPAK|LI 0.079 . NCLIV_051010 353 FISMCLR|FD 0.086 . NCLIV_051010 369 LANASEK|KT 0.071 . NCLIV_051010 370 ANASEKK|TA 0.096 . NCLIV_051010 382 SIDIHQK|FS 0.074 . NCLIV_051010 385 IHQKFSK|FY 0.082 . NCLIV_051010 438 ALNGQVK|EV 0.088 . NCLIV_051010 444 KEVLAYR|ED 0.088 . NCLIV_051010 450 REDEEEK|PA 0.075 . NCLIV_051010 464 AEPTEEK|KS 0.054 . NCLIV_051010 465 EPTEEKK|SK 0.145 . NCLIV_051010 467 TEEKKSK|-- 0.089 . ____________________________^_________________

  • Fasta :-

    >NCLIV_051010 ATGGGAAAGACAAAGACAGCCGCGACGCCTGACGCGCATGCGCCGGAGCGCCGCCTCTTC TACGGCTGCTTCGCCCTGTTGGGTGCGACGATGGCCATCTCGCACTTTGTCGCCTTGCCT GTCCTGCTGCAAATGATCGTTTACACTGTCTCCATTGTCTACATCGGCAGCCACGCCTCG CTGAAACAAAACGAAGTCGACGAAGTGACCGGCGAAAGATCCAACAAAGGCGAGGCCATG AACCACACAGACGCCATGCTGTTCCCCGTCTTTGGATCCCTCGCGCTGTGCAGCTTGTAC ATCGCCTACAAGTTTCTCGACGCCTCGTGGGTGAACTTTCTGCTCACTCTCTACCTGACG GCGATCGGGTTGGTGGCCCTCGGCGAAACCCTGCACGTCGCTCTCGTGCCGCTGTTCCCG GATTGGGCGAATGATCCGTCTCGGATTTCGTTCAAGTTCTGTTTGCCTCACATTCCGTTT ATCTGTCCTCGGCCGGAGCTGTCGACGCCTAGCGCGAAGGAAGCCTTCGAGGCCTCGTGC ACCTACCGCCTGTCGTACAGCCAACTTGGCGCGTACATCCTCGCCGCGGGGTTGTCTGCT CTCTGGCTCTGGAAGAAGCACTGGGCGATCCACAACCTCCTCGGCGTCGCCTTCTGCATT CAGGCAAGTCGAAGGGAAAAGAAGAAACGAAGAAGCAGAGGAAGAACGGAGAAGGGAAGA GGAGCGGGGAGCATTGAAGATCTCAAGCGCGCCAGCGGGGTGTATCTGGAGTTGCGTTTT TTCTCCCGTTCCTGGTCTGTCTCTGGAAGAACAAGTCCTGCGCGGGCGATCAGCCTGGTG AGTGTAGGCAACTTCACAGTCGCGACGATTCTCCTCTCGGGCCTCTTCATCTACGACATC TTCTGGGTGTTCGGCACCGACGTCATGGTCACTGTCGCAAAGTCGTTCGAAGGACCGGCC AAACTCATCTTCCCCGTCAACTTAGACCCGTGGCAACACAGCATTCTCGGCCTCGGAGAC ATCGTCATTCCGGGCGTCTTCATCTCCATGTGCCTGCGCTTCGACTACTGGCTAGCCACT GCGTCTCTCGCGAATGCCAGTGAAAAGAAGACCGCCGTCGAGACCTCCATCGACATTCAC CAGAAATTTAGCAAATTCTACTTTTTCGTGGTCCTCGTCTTCTACGAGTTTGGACTCTTA ACGACCGGCGTGATCATGCTCGTTTTTCAGCATCCCCAGCCTGCTCTCCTGTACATTGTC CCCTTCTGTCTCTTCTCGCTCTTCGGAGCTGCTGCTCTCAACGGCCAAGTGAAAGAAGTC CTGGCTTACCGAGAAGATGAAGAGGAGAAACCTGCGGAAGTCGAGGGCGAAGCTGAGCCG ACGGAAGAGAAAAAGAGCAAATGA
  • Download Fasta

  • Fasta :-

    MGKTKTAATPDAHAPERRLFYGCFALLGATMAISHFVALPVLLQMIVYTVSIVYIGSHAS LKQNEVDEVTGERSNKGEAMNHTDAMLFPVFGSLALCSLYIAYKFLDASWVNFLLTLYLT AIGLVALGETLHVALVPLFPDWANDPSRISFKFCLPHIPFICPRPELSTPSAKEAFEASC TYRLSYSQLGAYILAAGLSALWLWKKHWAIHNLLGVAFCIQASRREKKKRRSRGRTEKGR GAGSIEDLKRASGVYLELRFFSRSWSVSGRTSPARAISLVSVGNFTVATILLSGLFIYDI FWVFGTDVMVTVAKSFEGPAKLIFPVNLDPWQHSILGLGDIVIPGVFISMCLRFDYWLAT ASLANASEKKTAVETSIDIHQKFSKFYFFVVLVFYEFGLLTTGVIMLVFQHPQPALLYIV PFCLFSLFGAAALNGQVKEVLAYREDEEEKPAEVEGEAEPTEEKKSK

    No Results
    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
NCLIV_051010244 SRGAGSIEDL0.997unspNCLIV_051010244 SRGAGSIEDL0.997unspNCLIV_051010244 SRGAGSIEDL0.997unspNCLIV_051010272 SSGRTSPARA0.995unspNCLIV_051010171 SLSTPSAKEA0.995unspNCLIV_051010232 SKKRRSRGRT0.998unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India