NCLIV_052030 | conserved hypothetical protein

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0008233      

  • Computed_GO_Functions:  peptidase activity      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
NCLIV_052030OTHER0.9999160.0000110.000073
No Results

  • Fasta :-

    >NCLIV_052030 MRSFTMSSSVSSSPSPRCPASPGASPQGAQPAPFHVSASPPSGWPHTGATPSPTPQSPAS LSRPLYLPPPYLGHNATENPHAPTVPPAQSPHNGDTTDAREADDVQGCLCCLRSFSPTLF IAAVLGTWTFAGGVAGEIVLAFATLPAMFMVYGLYASAKARSLSGLCLLEFFWLGAFLSV CIAMCLELVANATLYSTFLSCLPPLPSSSSSLIPGFASGDFLNALASAPAGVPRYSADSP SLLEPEDSSAHAPASPLSSAFSASPPPLSLLEMLLSWTPAPLLAPLSLPFSFPLSASTQP HACLQTPQTALLTGTSADSVSSSPFSAPLSAFSVSPDSTSWGWPGLFSRLTERVHEIGSL PTLGCSLSLVAFMILCVGLVEEFAKLVVLHRLQVHTPAALAATGAEAASEQRGANCCTPC WTRRAAHPVGVCLAGCAAGAGFAMAENISYTLGRRGFFAEHLIVALVRAFTAVPTHIANS GMAAANLALAWYSECSFPAVSLSSSLASHQQPLISTSSPFSPRVRFWAQLLPSLLTPSLL HGTYDAALRLSAAYAQPSAAGDDNAAVVASVFLLVSLLAWLLTLLLFWKKWRSVRDLPTF GAASRGLSSDLSRVYPAGPAWSADPRVHWSVAQMPVPLSTYAPQNSPFFHGHAGAVPFYS PFAVAPAFPFGSPAASGAEAGVRADVLVWEERRRQANMGGLGAPRPRALSPAPLPESGHA ATSAARPMAGGERGEGREETDRSQ
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NCLIV_052030.fa Sequence name : NCLIV_052030 Sequence length : 744 VALUES OF COMPUTED PARAMETERS Coef20 : 4.700 CoefTot : -5.764 ChDiff : -4 ZoneTo : 94 KR : 3 DE : 1 CleavSite : 19 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.535 2.800 0.597 0.924 MesoH : 1.325 1.487 0.180 0.585 MuHd_075 : 27.245 19.250 6.777 6.705 MuHd_095 : 33.067 20.766 9.357 6.588 MuHd_100 : 27.235 18.179 8.036 5.623 MuHd_105 : 20.580 13.402 6.710 5.387 Hmax_075 : 13.767 4.900 0.726 2.893 Hmax_095 : 11.025 8.487 1.438 4.280 Hmax_100 : 11.400 10.400 1.726 4.340 Hmax_105 : 8.867 8.633 2.252 3.920 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7807 0.2193 DFMC : 0.8313 0.1687
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 744 NCLIV_052030 MRSFTMSSSVSSSPSPRCPASPGASPQGAQPAPFHVSASPPSGWPHTGATPSPTPQSPASLSRPLYLPPPYLGHNATENP 80 HAPTVPPAQSPHNGDTTDAREADDVQGCLCCLRSFSPTLFIAAVLGTWTFAGGVAGEIVLAFATLPAMFMVYGLYASAKA 160 RSLSGLCLLEFFWLGAFLSVCIAMCLELVANATLYSTFLSCLPPLPSSSSSLIPGFASGDFLNALASAPAGVPRYSADSP 240 SLLEPEDSSAHAPASPLSSAFSASPPPLSLLEMLLSWTPAPLLAPLSLPFSFPLSASTQPHACLQTPQTALLTGTSADSV 320 SSSPFSAPLSAFSVSPDSTSWGWPGLFSRLTERVHEIGSLPTLGCSLSLVAFMILCVGLVEEFAKLVVLHRLQVHTPAAL 400 AATGAEAASEQRGANCCTPCWTRRAAHPVGVCLAGCAAGAGFAMAENISYTLGRRGFFAEHLIVALVRAFTAVPTHIANS 480 GMAAANLALAWYSECSFPAVSLSSSLASHQQPLISTSSPFSPRVRFWAQLLPSLLTPSLLHGTYDAALRLSAAYAQPSAA 560 GDDNAAVVASVFLLVSLLAWLLTLLLFWKKWRSVRDLPTFGAASRGLSSDLSRVYPAGPAWSADPRVHWSVAQMPVPLST 640 YAPQNSPFFHGHAGAVPFYSPFAVAPAFPFGSPAASGAEAGVRADVLVWEERRRQANMGGLGAPRPRALSPAPLPESGHA 720 ATSAARPMAGGERGEGREETDRSQ 800 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ........................ 800 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NCLIV_052030 2 -----MR|SF 0.136 . NCLIV_052030 17 SSSPSPR|CP 0.108 . NCLIV_052030 63 SPASLSR|PL 0.094 . NCLIV_052030 100 GDTTDAR|EA 0.162 . NCLIV_052030 113 GCLCCLR|SF 0.121 . NCLIV_052030 159 GLYASAK|AR 0.077 . NCLIV_052030 161 YASAKAR|SL 0.250 . NCLIV_052030 234 APAGVPR|YS 0.155 . NCLIV_052030 349 WPGLFSR|LT 0.108 . NCLIV_052030 353 FSRLTER|VH 0.079 . NCLIV_052030 385 LVEEFAK|LV 0.072 . NCLIV_052030 391 KLVVLHR|LQ 0.071 . NCLIV_052030 412 EAASEQR|GA 0.106 . NCLIV_052030 423 CTPCWTR|RA 0.072 . NCLIV_052030 424 TPCWTRR|AA 0.402 . NCLIV_052030 454 ISYTLGR|RG 0.111 . NCLIV_052030 455 SYTLGRR|GF 0.107 . NCLIV_052030 468 LIVALVR|AF 0.111 . NCLIV_052030 523 SSPFSPR|VR 0.091 . NCLIV_052030 525 PFSPRVR|FW 0.148 . NCLIV_052030 549 TYDAALR|LS 0.069 . NCLIV_052030 589 TLLLFWK|KW 0.066 . NCLIV_052030 590 LLLFWKK|WR 0.074 . NCLIV_052030 592 LFWKKWR|SV 0.257 . NCLIV_052030 595 KKWRSVR|DL 0.431 . NCLIV_052030 605 TFGAASR|GL 0.101 . NCLIV_052030 613 LSSDLSR|VY 0.113 . NCLIV_052030 626 AWSADPR|VH 0.098 . NCLIV_052030 683 GAEAGVR|AD 0.073 . NCLIV_052030 692 VLVWEER|RR 0.076 . NCLIV_052030 693 LVWEERR|RQ 0.091 . NCLIV_052030 694 VWEERRR|QA 0.165 . NCLIV_052030 705 GGLGAPR|PR 0.067 . NCLIV_052030 707 LGAPRPR|AL 0.125 . NCLIV_052030 726 AATSAAR|PM 0.097 . NCLIV_052030 733 PMAGGER|GE 0.107 . NCLIV_052030 737 GERGEGR|EE 0.087 . NCLIV_052030 742 GREETDR|SQ 0.122 . ____________________________^_________________

  • Fasta :-

    >NCLIV_052030 ATGCGCTCCTTCACCATGTCTTCGAGTGTCTCCTCTTCTCCCTCTCCTCGCTGTCCCGCC TCTCCTGGCGCCTCGCCCCAGGGCGCACAGCCCGCGCCTTTCCATGTCTCTGCTTCGCCC CCGTCGGGGTGGCCTCACACCGGCGCGACTCCGTCTCCAACTCCGCAGAGTCCGGCGTCT CTCTCCCGCCCGCTCTACTTGCCGCCTCCGTACCTCGGTCACAACGCGACAGAGAACCCG CATGCCCCTACCGTACCTCCCGCGCAGTCGCCCCACAATGGAGACACCACGGACGCGAGA GAGGCCGACGACGTCCAGGGCTGTCTCTGCTGCCTGCGCTCCTTCTCGCCCACTCTCTTC ATCGCTGCGGTCTTGGGCACCTGGACCTTTGCTGGCGGCGTGGCCGGAGAAATCGTGCTT GCCTTCGCGACTCTCCCTGCAATGTTCATGGTATACGGACTGTATGCATCCGCGAAGGCC CGGAGTCTTTCTGGACTGTGTCTGCTGGAGTTCTTCTGGCTAGGGGCCTTCCTCTCGGTG TGCATCGCCATGTGTTTGGAGCTCGTGGCCAACGCGACTCTGTACAGTACCTTTCTCTCT TGCCTCCCTCCGCTCCCCTCGTCCTCTTCTTCTCTGATTCCTGGCTTTGCTTCCGGCGAC TTCTTGAACGCGCTCGCTTCCGCGCCTGCCGGCGTCCCTCGTTATTCCGCTGACTCGCCG TCTCTCCTCGAGCCTGAGGACTCCTCTGCGCATGCGCCTGCTTCTCCTCTCTCTTCTGCC TTTTCCGCCTCTCCGCCCCCGCTGTCTCTCCTTGAGATGCTGCTCTCGTGGACACCCGCG CCACTGCTCGCCCCTCTGTCTCTCCCCTTTTCCTTTCCTTTGTCTGCATCCACACAGCCG CACGCGTGCCTCCAAACCCCGCAAACTGCGCTGCTCACTGGCACCTCAGCAGACTCGGTG TCTTCCTCTCCCTTCTCTGCTCCTCTCTCTGCGTTCTCCGTTTCGCCAGACTCCACGAGC TGGGGGTGGCCAGGGCTTTTCTCTCGACTGACGGAGAGAGTGCATGAGATCGGCAGCTTG CCCACGCTAGGCTGTTCCCTCAGCCTTGTTGCATTCATGATCTTGTGTGTGGGCCTCGTG GAGGAGTTCGCGAAACTCGTCGTTCTGCATCGGCTGCAAGTGCATACCCCAGCGGCTCTG GCCGCGACAGGCGCAGAAGCGGCGTCGGAGCAGCGAGGCGCGAACTGCTGCACGCCCTGC TGGACGCGACGCGCCGCGCACCCCGTGGGCGTCTGCCTCGCCGGGTGTGCAGCTGGAGCC GGATTCGCCATGGCGGAGAACATCAGCTACACGTTAGGGCGCCGAGGGTTTTTCGCGGAG CACCTGATCGTCGCCCTCGTCCGGGCCTTCACCGCAGTGCCGACCCACATCGCAAACTCA GGCATGGCGGCGGCGAACTTGGCGCTGGCCTGGTACTCGGAGTGTTCATTTCCGGCTGTC TCTCTCTCCTCTTCCCTCGCGTCGCATCAGCAGCCTCTCATTTCGACTTCGTCTCCGTTC TCTCCGCGTGTCCGCTTTTGGGCGCAGCTTCTGCCCTCGCTGCTGACTCCGTCGCTGCTT CACGGGACCTACGACGCGGCGTTGCGACTCTCTGCTGCGTACGCGCAGCCCAGCGCGGCG GGAGACGACAACGCCGCAGTTGTCGCGTCTGTTTTCCTTCTCGTCTCCCTCCTCGCTTGG CTTCTCACGCTGCTCCTCTTCTGGAAGAAGTGGAGAAGCGTGCGCGACTTGCCGACCTTC GGCGCGGCTTCTCGCGGCCTCTCGTCCGATCTCAGTCGCGTCTACCCCGCGGGGCCGGCC TGGTCTGCGGACCCTCGCGTGCACTGGAGCGTCGCCCAGATGCCGGTGCCGCTGTCCACG TATGCGCCCCAGAACTCCCCTTTCTTCCACGGGCATGCAGGAGCGGTTCCTTTCTACTCC CCCTTCGCGGTCGCCCCAGCGTTCCCCTTTGGTAGCCCCGCGGCGAGTGGAGCGGAGGCA GGCGTCCGGGCTGACGTCCTGGTGTGGGAAGAGCGGAGACGCCAGGCCAACATGGGCGGT CTGGGGGCTCCCAGACCGCGTGCGTTGTCTCCGGCTCCGCTTCCAGAGTCGGGGCATGCA GCGACAAGCGCCGCGCGGCCCATGGCAGGCGGAGAGAGAGGCGAGGGACGCGAGGAGACA GATCGATCGCAGTAG
  • Download Fasta

  • Fasta :-

    MRSFTMSSSVSSSPSPRCPASPGASPQGAQPAPFHVSASPPSGWPHTGATPSPTPQSPAS LSRPLYLPPPYLGHNATENPHAPTVPPAQSPHNGDTTDAREADDVQGCLCCLRSFSPTLF IAAVLGTWTFAGGVAGEIVLAFATLPAMFMVYGLYASAKARSLSGLCLLEFFWLGAFLSV CIAMCLELVANATLYSTFLSCLPPLPSSSSSLIPGFASGDFLNALASAPAGVPRYSADSP SLLEPEDSSAHAPASPLSSAFSASPPPLSLLEMLLSWTPAPLLAPLSLPFSFPLSASTQP HACLQTPQTALLTGTSADSVSSSPFSAPLSAFSVSPDSTSWGWPGLFSRLTERVHEIGSL PTLGCSLSLVAFMILCVGLVEEFAKLVVLHRLQVHTPAALAATGAEAASEQRGANCCTPC WTRRAAHPVGVCLAGCAAGAGFAMAENISYTLGRRGFFAEHLIVALVRAFTAVPTHIANS GMAAANLALAWYSECSFPAVSLSSSLASHQQPLISTSSPFSPRVRFWAQLLPSLLTPSLL HGTYDAALRLSAAYAQPSAAGDDNAAVVASVFLLVSLLAWLLTLLLFWKKWRSVRDLPTF GAASRGLSSDLSRVYPAGPAWSADPRVHWSVAQMPVPLSTYAPQNSPFFHGHAGAVPFYS PFAVAPAFPFGSPAASGAEAGVRADVLVWEERRRQANMGGLGAPRPRALSPAPLPESGHA ATSAARPMAGGERGEGREETDRSQ

    No Results
    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
NCLIV_052030319 STSADSVSSS0.994unspNCLIV_052030319 STSADSVSSS0.994unspNCLIV_052030319 STSADSVSSS0.994unspNCLIV_052030521 SSSPFSPRVR0.996unspNCLIV_052030593 SKKWRSVRDL0.992unspNCLIV_052030710 SPRALSPAPL0.993unspNCLIV_05203015 SSSSPSPRCP0.994unspNCLIV_052030239 SYSADSPSLL0.995unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India