NCLIV_059800 | conserved hypothetical protein

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  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

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  • Curated_GO_Component_IDs:        

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_IDPredictionOTHERSPmTPCS_Position
NCLIV_059800OTHER1.0000000.0000000.000000
No Results

  • Fasta :-

    >NCLIV_059800 MSDPVDSPTTPASAGPATTEADHKPAAAGGGKADVNRVKTPVPPKTSAGNKPDEKNPAET PVPKETKPEETSDKKKAKKKKYGTAPDEDARRTPFGEDPLIFPYRSLLKSHDTDGDYPDS SDASSDEASDKKKGRRRKSEKDSEEEERKARFGEDPLIFPFRSSVRRHSKNDGDYPDSSD ASSDEASDKKKGRRRKSEKDSEEEERKARFVEDPLIFPFRSSVRRHSKKAGGGVGADRSE AQSDEVFDAHGSPTPEEGGEAATLSPRTKTPGTADKKDPDGASSERVEDDAEGPPAKSPR VDAREGLRKSPDLPFIPPVIQQLGFHEPSLAWRVKTASSLGIPASQVGTQPLLSPAPFLG RPVAVHQMAPDGSCFFRALSFALTGSQVFAQAIRNCVVDFLLGSPQLTAEDVWTTQDLRE ELQRAVGRRGLPLWMAHGSGALKPVRDMTRPDLLELYRKYMSYRRTFATEREVDAAARLF GCRILVYLPSRPETKERAAWLVHSPQGHDDDLAHHMAAIYVVNIGRNHFDVVSRVATPTE AEGV
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NCLIV_059800.fa Sequence name : NCLIV_059800 Sequence length : 544 VALUES OF COMPUTED PARAMETERS Coef20 : 3.256 CoefTot : 0.112 ChDiff : -3 ZoneTo : 2 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.988 1.188 0.092 0.410 MesoH : 0.227 0.565 -0.152 0.286 MuHd_075 : 9.665 6.638 2.665 1.836 MuHd_095 : 17.123 10.708 3.654 3.217 MuHd_100 : 18.316 8.346 3.808 3.430 MuHd_105 : 21.325 8.937 4.357 3.821 Hmax_075 : 12.833 7.117 1.304 3.197 Hmax_095 : 9.975 5.075 0.542 3.200 Hmax_100 : 9.800 4.000 0.352 3.200 Hmax_105 : 10.200 4.400 0.631 2.730 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9605 0.0395 DFMC : 0.9437 0.0563
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 544 NCLIV_059800 MSDPVDSPTTPASAGPATTEADHKPAAAGGGKADVNRVKTPVPPKTSAGNKPDEKNPAETPVPKETKPEETSDKKKAKKK 80 KYGTAPDEDARRTPFGEDPLIFPYRSLLKSHDTDGDYPDSSDASSDEASDKKKGRRRKSEKDSEEEERKARFGEDPLIFP 160 FRSSVRRHSKNDGDYPDSSDASSDEASDKKKGRRRKSEKDSEEEERKARFVEDPLIFPFRSSVRRHSKKAGGGVGADRSE 240 AQSDEVFDAHGSPTPEEGGEAATLSPRTKTPGTADKKDPDGASSERVEDDAEGPPAKSPRVDAREGLRKSPDLPFIPPVI 320 QQLGFHEPSLAWRVKTASSLGIPASQVGTQPLLSPAPFLGRPVAVHQMAPDGSCFFRALSFALTGSQVFAQAIRNCVVDF 400 LLGSPQLTAEDVWTTQDLREELQRAVGRRGLPLWMAHGSGALKPVRDMTRPDLLELYRKYMSYRRTFATEREVDAAARLF 480 GCRILVYLPSRPETKERAAWLVHSPQGHDDDLAHHMAAIYVVNIGRNHFDVVSRVATPTEAEGV 560 ................................................................................ 80 .........................................................P...................... 160 ...................................P............P............................... 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................ 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 3 Name Pos Context Score Pred ____________________________v_________________ NCLIV_059800 24 TTEADHK|PA 0.077 . NCLIV_059800 32 AAAGGGK|AD 0.059 . NCLIV_059800 37 GKADVNR|VK 0.114 . NCLIV_059800 39 ADVNRVK|TP 0.058 . NCLIV_059800 45 KTPVPPK|TS 0.061 . NCLIV_059800 51 KTSAGNK|PD 0.074 . NCLIV_059800 55 GNKPDEK|NP 0.054 . NCLIV_059800 64 AETPVPK|ET 0.074 . NCLIV_059800 67 PVPKETK|PE 0.063 . NCLIV_059800 74 PEETSDK|KK 0.061 . NCLIV_059800 75 EETSDKK|KA 0.086 . NCLIV_059800 76 ETSDKKK|AK 0.171 . NCLIV_059800 78 SDKKKAK|KK 0.083 . NCLIV_059800 79 DKKKAKK|KK 0.103 . NCLIV_059800 80 KKKAKKK|KY 0.188 . NCLIV_059800 81 KKAKKKK|YG 0.158 . NCLIV_059800 91 APDEDAR|RT 0.086 . NCLIV_059800 92 PDEDARR|TP 0.106 . NCLIV_059800 105 PLIFPYR|SL 0.176 . NCLIV_059800 109 PYRSLLK|SH 0.074 . NCLIV_059800 131 SDEASDK|KK 0.074 . NCLIV_059800 132 DEASDKK|KG 0.075 . NCLIV_059800 133 EASDKKK|GR 0.113 . NCLIV_059800 135 SDKKKGR|RR 0.100 . NCLIV_059800 136 DKKKGRR|RK 0.135 . NCLIV_059800 137 KKKGRRR|KS 0.159 . NCLIV_059800 138 KKGRRRK|SE 0.620 *ProP* NCLIV_059800 141 RRRKSEK|DS 0.145 . NCLIV_059800 148 DSEEEER|KA 0.112 . NCLIV_059800 149 SEEEERK|AR 0.080 . NCLIV_059800 151 EEERKAR|FG 0.332 . NCLIV_059800 162 PLIFPFR|SS 0.104 . NCLIV_059800 166 PFRSSVR|RH 0.084 . NCLIV_059800 167 FRSSVRR|HS 0.221 . NCLIV_059800 170 SVRRHSK|ND 0.232 . NCLIV_059800 189 SDEASDK|KK 0.074 . NCLIV_059800 190 DEASDKK|KG 0.075 . NCLIV_059800 191 EASDKKK|GR 0.113 . NCLIV_059800 193 SDKKKGR|RR 0.100 . NCLIV_059800 194 DKKKGRR|RK 0.135 . NCLIV_059800 195 KKKGRRR|KS 0.159 . NCLIV_059800 196 KKGRRRK|SE 0.620 *ProP* NCLIV_059800 199 RRRKSEK|DS 0.145 . NCLIV_059800 206 DSEEEER|KA 0.109 . NCLIV_059800 207 SEEEERK|AR 0.078 . NCLIV_059800 209 EEERKAR|FV 0.570 *ProP* NCLIV_059800 220 PLIFPFR|SS 0.103 . NCLIV_059800 224 PFRSSVR|RH 0.090 . NCLIV_059800 225 FRSSVRR|HS 0.352 . NCLIV_059800 228 SVRRHSK|KA 0.323 . NCLIV_059800 229 VRRHSKK|AG 0.225 . NCLIV_059800 238 GGVGADR|SE 0.114 . NCLIV_059800 267 AATLSPR|TK 0.088 . NCLIV_059800 269 TLSPRTK|TP 0.086 . NCLIV_059800 276 TPGTADK|KD 0.070 . NCLIV_059800 277 PGTADKK|DP 0.087 . NCLIV_059800 286 DGASSER|VE 0.092 . NCLIV_059800 297 AEGPPAK|SP 0.075 . NCLIV_059800 300 PPAKSPR|VD 0.119 . NCLIV_059800 304 SPRVDAR|EG 0.109 . NCLIV_059800 308 DAREGLR|KS 0.069 . NCLIV_059800 309 AREGLRK|SP 0.094 . NCLIV_059800 333 EPSLAWR|VK 0.108 . NCLIV_059800 335 SLAWRVK|TA 0.082 . NCLIV_059800 361 PAPFLGR|PV 0.110 . NCLIV_059800 377 DGSCFFR|AL 0.180 . NCLIV_059800 394 VFAQAIR|NC 0.066 . NCLIV_059800 419 WTTQDLR|EE 0.060 . NCLIV_059800 424 LREELQR|AV 0.143 . NCLIV_059800 428 LQRAVGR|RG 0.083 . NCLIV_059800 429 QRAVGRR|GL 0.195 . NCLIV_059800 443 HGSGALK|PV 0.077 . NCLIV_059800 446 GALKPVR|DM 0.081 . NCLIV_059800 450 PVRDMTR|PD 0.074 . NCLIV_059800 458 DLLELYR|KY 0.081 . NCLIV_059800 459 LLELYRK|YM 0.082 . NCLIV_059800 464 RKYMSYR|RT 0.131 . NCLIV_059800 465 KYMSYRR|TF 0.110 . NCLIV_059800 471 RTFATER|EV 0.123 . NCLIV_059800 478 EVDAAAR|LF 0.080 . NCLIV_059800 483 ARLFGCR|IL 0.074 . NCLIV_059800 491 LVYLPSR|PE 0.081 . NCLIV_059800 495 PSRPETK|ER 0.067 . NCLIV_059800 497 RPETKER|AA 0.128 . NCLIV_059800 526 YVVNIGR|NH 0.084 . NCLIV_059800 534 HFDVVSR|VA 0.105 . ____________________________^_________________

  • Fasta :-

    >NCLIV_059800 ATGAGCGACCCCGTAGATAGTCCGACGACCCCCGCCAGCGCAGGGCCCGCGACGACGGAA GCCGATCATAAACCTGCGGCGGCCGGCGGAGGAAAAGCCGACGTCAACCGTGTTAAAACC CCCGTCCCGCCAAAGACGAGTGCAGGCAACAAACCCGACGAAAAGAATCCCGCGGAAACA CCCGTCCCTAAAGAAACGAAGCCCGAGGAGACGTCCGACAAGAAGAAAGCCAAGAAGAAA AAGTATGGGACGGCTCCTGATGAAGACGCGCGTCGAACCCCCTTTGGTGAGGATCCCTTG ATCTTTCCGTACAGAAGTCTTCTCAAGAGTCACGATACTGATGGCGACTACCCTGATTCT TCAGACGCGAGTTCCGACGAGGCGTCCGACAAGAAGAAAGGGAGGAGAAGGAAGTCTGAG AAGGACTCTGAGGAAGAAGAGCGCAAGGCCCGATTCGGGGAGGATCCGTTGATCTTTCCC TTCCGGAGTTCCGTCAGGAGGCACAGCAAGAACGATGGCGACTACCCTGATTCTTCAGAC GCGAGTTCCGACGAGGCGTCGGACAAGAAGAAAGGGAGGAGAAGGAAGTCTGAGAAGGAT TCTGAGGAAGAAGAGCGCAAGGCCCGATTCGTGGAGGATCCGTTGATCTTTCCCTTCCGG AGTTCCGTCAGGAGGCACAGCAAGAAGGCCGGTGGTGGGGTTGGCGCTGACCGTTCAGAA GCGCAATCCGACGAGGTTTTCGACGCACACGGCAGTCCTACCCCGGAGGAAGGCGGGGAA GCGGCGACGCTCAGTCCTCGAACGAAAACTCCCGGCACCGCCGACAAAAAGGATCCCGAC GGTGCGTCCAGCGAGCGCGTGGAGGACGACGCCGAGGGCCCCCCAGCGAAGAGTCCTCGC GTGGACGCCCGGGAAGGGCTCCGAAAGTCTCCCGACCTGCCATTCATTCCTCCTGTGATT CAGCAACTTGGTTTCCATGAACCGTCTTTGGCGTGGCGCGTGAAGACGGCTTCTTCCCTC GGGATTCCCGCTTCGCAAGTCGGGACCCAGCCGCTGCTGTCGCCTGCACCATTTCTGGGC CGGCCGGTGGCTGTTCACCAGATGGCGCCTGACGGATCCTGTTTCTTTCGTGCCTTGAGT TTTGCCCTCACTGGCAGCCAGGTCTTTGCGCAAGCGATACGGAACTGCGTTGTGGATTTC TTGCTGGGGAGTCCGCAGCTAACAGCTGAAGACGTCTGGACCACGCAAGACCTCCGCGAG GAGCTGCAGAGAGCAGTCGGGAGACGCGGACTTCCGTTGTGGATGGCGCACGGCTCAGGG GCGCTCAAGCCGGTCCGGGACATGACACGCCCGGACCTTCTCGAGTTGTACAGAAAGTAC ATGAGTTACCGTAGAACCTTTGCGACGGAGAGGGAGGTCGATGCGGCGGCGCGCCTGTTC GGCTGTCGCATCTTGGTGTATCTTCCGAGTCGGCCCGAAACAAAGGAGAGAGCGGCTTGG TTGGTACATTCCCCGCAAGGCCACGACGACGACTTGGCGCATCACATGGCGGCAATTTAT GTCGTGAACATCGGTCGTAACCACTTCGACGTCGTCAGCAGAGTAGCGACACCAACCGAG GCGGAAGGTGTCTGA
  • Download Fasta

  • Fasta :-

    MSDPVDSPTTPASAGPATTEADHKPAAAGGGKADVNRVKTPVPPKTSAGNKPDEKNPAET PVPKETKPEETSDKKKAKKKKYGTAPDEDARRTPFGEDPLIFPYRSLLKSHDTDGDYPDS SDASSDEASDKKKGRRRKSEKDSEEEERKARFGEDPLIFPFRSSVRRHSKNDGDYPDSSD ASSDEASDKKKGRRRKSEKDSEEEERKARFVEDPLIFPFRSSVRRHSKKAGGGVGADRSE AQSDEVFDAHGSPTPEEGGEAATLSPRTKTPGTADKKDPDGASSERVEDDAEGPPAKSPR VDAREGLRKSPDLPFIPPVIQQLGFHEPSLAWRVKTASSLGIPASQVGTQPLLSPAPFLG RPVAVHQMAPDGSCFFRALSFALTGSQVFAQAIRNCVVDFLLGSPQLTAEDVWTTQDLRE ELQRAVGRRGLPLWMAHGSGALKPVRDMTRPDLLELYRKYMSYRRTFATEREVDAAARLF GCRILVYLPSRPETKERAAWLVHSPQGHDDDLAHHMAAIYVVNIGRNHFDVVSRVATPTE AEGV

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
NCLIV_059800139 SRRRKSEKDS0.998unspNCLIV_059800139 SRRRKSEKDS0.998unspNCLIV_059800139 SRRRKSEKDS0.998unspNCLIV_059800143 SSEKDSEEEE0.998unspNCLIV_059800164 SPFRSSVRRH0.996unspNCLIV_059800169 SVRRHSKNDG0.998unspNCLIV_059800182 SSSDASSDEA0.994unspNCLIV_059800183 SSDASSDEAS0.997unspNCLIV_059800197 SRRRKSEKDS0.998unspNCLIV_059800201 SSEKDSEEEE0.998unspNCLIV_059800222 SPFRSSVRRH0.996unspNCLIV_059800227 SVRRHSKKAG0.998unspNCLIV_059800243 SSEAQSDEVF0.993unspNCLIV_059800462 SRKYMSYRRT0.996unspNCLIV_059800537 TSRVATPTEA0.99unspNCLIV_059800124 SSSDASSDEA0.994unspNCLIV_059800125 SSDASSDEAS0.997unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India