NCLIV_060010 | putative oligoendopeptidase F

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0004222      

  • Computed_GO_Functions:  metalloendopeptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
NCLIV_060010OTHER0.9998670.0000380.000095
No Results

  • Fasta :-

    >NCLIV_060010 MRPETLEQLLSTDERVRQYYSFVDRIRTQGQFLLDETIEKALDIRAPWTSPDIAVKAYRK QLSSSTFRLAGQPDVFSYTQIRELMRSENQEIRHHGQQAIKDGIVENRIDKFASLALNMV VGSWSIETRERGYPSPRSRRNVLNRISDEIVDALIAAVKKEGVELTRRALLLKKQLLTAT GKIKAFSFVDRLAPLTLSRDSSMDANARIPWCQAVEKVKKGYASFSPVFVRLFENLLKEG RIDAAPAEGKQTGAFCSGGTPATGPFILMTHTGVKANVQTLAHEAGHAIHFLLAYEQGNL QYHPPLPLAETASLMGETIVFYHLLDQTDSPQKVLEMLIEHVDSLVGTITRQVSFDRFEE LVHEARLSGIVGDEDFDQMWLQSTREFFGDEGDVFDDYAGIEKDWSTVHHFTKAPFYVYS YALADLLVGSLLAARSKNNGSDFEEKFISFLQAGDTADLETALRPFGLDPKTPSFWREAI GMRLGTAVERAERIAAELGYIEATGY
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NCLIV_060010.fa Sequence name : NCLIV_060010 Sequence length : 506 VALUES OF COMPUTED PARAMETERS Coef20 : 3.761 CoefTot : -0.118 ChDiff : -12 ZoneTo : 3 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.688 1.559 0.257 0.596 MesoH : 0.144 0.251 -0.306 0.310 MuHd_075 : 29.579 21.813 8.506 5.437 MuHd_095 : 19.965 13.576 5.012 2.900 MuHd_100 : 21.656 17.374 6.594 3.256 MuHd_105 : 22.370 19.730 7.882 4.842 Hmax_075 : -1.750 4.083 -1.831 0.128 Hmax_095 : -1.100 1.500 -2.942 1.150 Hmax_100 : -5.200 3.100 -3.249 -0.200 Hmax_105 : -1.983 6.883 -1.106 1.120 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8021 0.1979 DFMC : 0.8025 0.1975
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 506 NCLIV_060010 MRPETLEQLLSTDERVRQYYSFVDRIRTQGQFLLDETIEKALDIRAPWTSPDIAVKAYRKQLSSSTFRLAGQPDVFSYTQ 80 IRELMRSENQEIRHHGQQAIKDGIVENRIDKFASLALNMVVGSWSIETRERGYPSPRSRRNVLNRISDEIVDALIAAVKK 160 EGVELTRRALLLKKQLLTATGKIKAFSFVDRLAPLTLSRDSSMDANARIPWCQAVEKVKKGYASFSPVFVRLFENLLKEG 240 RIDAAPAEGKQTGAFCSGGTPATGPFILMTHTGVKANVQTLAHEAGHAIHFLLAYEQGNLQYHPPLPLAETASLMGETIV 320 FYHLLDQTDSPQKVLEMLIEHVDSLVGTITRQVSFDRFEELVHEARLSGIVGDEDFDQMWLQSTREFFGDEGDVFDDYAG 400 IEKDWSTVHHFTKAPFYVYSYALADLLVGSLLAARSKNNGSDFEEKFISFLQAGDTADLETALRPFGLDPKTPSFWREAI 480 GMRLGTAVERAERIAAELGYIEATGY 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 .......................... 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NCLIV_060010 2 -----MR|PE 0.078 . NCLIV_060010 15 LLSTDER|VR 0.072 . NCLIV_060010 17 STDERVR|QY 0.075 . NCLIV_060010 25 YYSFVDR|IR 0.116 . NCLIV_060010 27 SFVDRIR|TQ 0.101 . NCLIV_060010 40 LDETIEK|AL 0.063 . NCLIV_060010 45 EKALDIR|AP 0.086 . NCLIV_060010 56 SPDIAVK|AY 0.079 . NCLIV_060010 59 IAVKAYR|KQ 0.071 . NCLIV_060010 60 AVKAYRK|QL 0.082 . NCLIV_060010 68 LSSSTFR|LA 0.138 . NCLIV_060010 82 FSYTQIR|EL 0.122 . NCLIV_060010 86 QIRELMR|SE 0.156 . NCLIV_060010 93 SENQEIR|HH 0.115 . NCLIV_060010 101 HGQQAIK|DG 0.067 . NCLIV_060010 108 DGIVENR|ID 0.075 . NCLIV_060010 111 VENRIDK|FA 0.219 . NCLIV_060010 129 SWSIETR|ER 0.099 . NCLIV_060010 131 SIETRER|GY 0.074 . NCLIV_060010 137 RGYPSPR|SR 0.136 . NCLIV_060010 139 YPSPRSR|RN 0.085 . NCLIV_060010 140 PSPRSRR|NV 0.497 . NCLIV_060010 145 RRNVLNR|IS 0.187 . NCLIV_060010 159 ALIAAVK|KE 0.064 . NCLIV_060010 160 LIAAVKK|EG 0.083 . NCLIV_060010 167 EGVELTR|RA 0.073 . NCLIV_060010 168 GVELTRR|AL 0.086 . NCLIV_060010 173 RRALLLK|KQ 0.057 . NCLIV_060010 174 RALLLKK|QL 0.090 . NCLIV_060010 182 LLTATGK|IK 0.057 . NCLIV_060010 184 TATGKIK|AF 0.073 . NCLIV_060010 191 AFSFVDR|LA 0.097 . NCLIV_060010 199 APLTLSR|DS 0.090 . NCLIV_060010 208 SMDANAR|IP 0.079 . NCLIV_060010 217 WCQAVEK|VK 0.059 . NCLIV_060010 219 QAVEKVK|KG 0.065 . NCLIV_060010 220 AVEKVKK|GY 0.092 . NCLIV_060010 231 FSPVFVR|LF 0.097 . NCLIV_060010 238 LFENLLK|EG 0.053 . NCLIV_060010 241 NLLKEGR|ID 0.068 . NCLIV_060010 250 AAPAEGK|QT 0.073 . NCLIV_060010 275 MTHTGVK|AN 0.067 . NCLIV_060010 333 QTDSPQK|VL 0.060 . NCLIV_060010 351 LVGTITR|QV 0.112 . NCLIV_060010 357 RQVSFDR|FE 0.095 . NCLIV_060010 366 ELVHEAR|LS 0.106 . NCLIV_060010 385 MWLQSTR|EF 0.092 . NCLIV_060010 403 DYAGIEK|DW 0.076 . NCLIV_060010 413 TVHHFTK|AP 0.076 . NCLIV_060010 435 GSLLAAR|SK 0.110 . NCLIV_060010 437 LLAARSK|NN 0.069 . NCLIV_060010 446 GSDFEEK|FI 0.080 . NCLIV_060010 464 DLETALR|PF 0.077 . NCLIV_060010 471 PFGLDPK|TP 0.057 . NCLIV_060010 477 KTPSFWR|EA 0.103 . NCLIV_060010 483 REAIGMR|LG 0.098 . NCLIV_060010 490 LGTAVER|AE 0.075 . NCLIV_060010 493 AVERAER|IA 0.176 . ____________________________^_________________

  • Fasta :-

    >NCLIV_060010 ATGCGGCCGGAGACGTTGGAGCAACTTCTTTCAACCGATGAGCGCGTCCGGCAGTACTAT TCCTTCGTCGATAGGATTCGAACACAGGGCCAGTTTCTACTGGACGAAACCATTGAAAAA GCATTGGACATCCGTGCACCGTGGACATCACCAGACATCGCGGTCAAAGCTTATCGGAAG CAGCTGAGTTCTTCGACCTTCCGACTAGCAGGACAGCCGGACGTTTTCTCCTACACACAA ATACGAGAGCTCATGCGAAGTGAAAACCAAGAGATACGACACCACGGGCAACAAGCAATC AAGGATGGAATCGTCGAGAATCGCATTGACAAATTCGCTTCTCTTGCTCTCAATATGGTC GTCGGCAGTTGGAGCATTGAAACTCGAGAGAGAGGCTATCCTTCCCCCCGGTCCCGGCGA AACGTATTGAACAGAATATCCGATGAAATTGTCGACGCGCTGATAGCTGCAGTGAAGAAG GAAGGTGTCGAACTTACGAGGAGGGCCTTGCTCCTGAAGAAGCAGCTTCTCACCGCAACA GGCAAAATCAAGGCATTTTCCTTCGTGGACCGCCTGGCTCCCTTGACCTTAAGCAGGGAT TCGTCGATGGATGCGAACGCGCGTATCCCTTGGTGCCAAGCAGTCGAGAAAGTCAAAAAA GGCTATGCGAGCTTCTCTCCGGTGTTCGTGCGGCTTTTCGAGAATTTGTTGAAGGAAGGG CGCATTGATGCTGCTCCGGCAGAAGGAAAGCAAACGGGTGCTTTCTGTAGCGGTGGCACG CCGGCTACTGGTCCATTCATTCTTATGACACACACTGGAGTGAAGGCGAACGTCCAAACT TTGGCTCACGAGGCAGGACATGCAATTCACTTCCTGCTTGCGTACGAGCAGGGCAACCTA CAATACCATCCTCCTCTTCCACTGGCAGAAACTGCAAGCTTGATGGGTGAAACAATCGTG TTTTACCATCTACTGGACCAAACGGACTCTCCTCAGAAAGTTCTAGAAATGCTCATTGAA CACGTGGACAGCTTGGTTGGCACCATCACTCGTCAAGTCTCTTTCGATCGGTTCGAGGAA CTTGTGCACGAGGCGCGGCTCTCAGGGATCGTGGGGGACGAAGACTTCGACCAAATGTGG CTTCAGAGCACCAGGGAATTTTTCGGCGACGAGGGGGACGTGTTCGATGACTATGCAGGC ATTGAAAAAGACTGGAGCACTGTTCACCACTTCACAAAGGCCCCTTTTTATGTCTACTCT TACGCTCTTGCGGACCTGCTGGTAGGTTCGCTTCTCGCAGCGAGGTCAAAGAATAATGGA AGTGATTTCGAGGAAAAGTTTATTAGCTTCCTCCAGGCGGGCGACACGGCCGACCTTGAG ACAGCCCTCCGCCCTTTTGGACTCGACCCTAAAACACCGTCGTTCTGGAGAGAGGCTATC GGAATGAGACTAGGCACTGCAGTCGAGCGCGCAGAACGAATAGCGGCTGAACTAGGCTAC ATAGAGGCTACTGGTTACTGA
  • Download Fasta

  • Fasta :-

    MRPETLEQLLSTDERVRQYYSFVDRIRTQGQFLLDETIEKALDIRAPWTSPDIAVKAYRK QLSSSTFRLAGQPDVFSYTQIRELMRSENQEIRHHGQQAIKDGIVENRIDKFASLALNMV VGSWSIETRERGYPSPRSRRNVLNRISDEIVDALIAAVKKEGVELTRRALLLKKQLLTAT GKIKAFSFVDRLAPLTLSRDSSMDANARIPWCQAVEKVKKGYASFSPVFVRLFENLLKEG RIDAAPAEGKQTGAFCSGGTPATGPFILMTHTGVKANVQTLAHEAGHAIHFLLAYEQGNL QYHPPLPLAETASLMGETIVFYHLLDQTDSPQKVLEMLIEHVDSLVGTITRQVSFDRFEE LVHEARLSGIVGDEDFDQMWLQSTREFFGDEGDVFDDYAGIEKDWSTVHHFTKAPFYVYS YALADLLVGSLLAARSKNNGSDFEEKFISFLQAGDTADLETALRPFGLDPKTPSFWREAI GMRLGTAVERAERIAAELGYIEATGY

  • title: Zn binding site
  • coordinates: H283,H287,E310
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
NCLIV_060010201 SLSRDSSMDA0.998unspNCLIV_060010354 STRQVSFDRF0.993unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India