NCLIV_063040 | conserved hypothetical protein

  • Computed_GO_Component_IDs:        

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  • Computed_GO_Function_IDs:        

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  • Curated_GO_Component_IDs:        

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_IDPredictionOTHERSPmTPCS_Position
NCLIV_063040OTHER0.9999990.0000010.000000
No Results

  • Fasta :-

    >NCLIV_063040 MDESRVSHRRASRVPEVGASAAEISELGTGERTEEKSDQDSEVEAVAVIKRRRIAGLSGG RFRDCFPKEEIPHQTPHQPDSSPSSSEGSDSVHGNGARAHVSQPGSPPCSFAAGRMDDKT PPGELFSGALSSSSSSSSSPSSSSSLYSASSSFPSSPSSSSSSSSCSSSSSLPSSSSSRE VNLASLSIDGQAELVAPDLHALFAYYNDAFFEGKLSGVEVRWSKRMTLCAGLCVYQTGGY CSVRLSEPLLKFRSVKEFRETLLHEMIHAFLFVSKRNRDHDAHGPDFLAHMRRLNALTGL NITVFHNFHDEVAHYRTHIWRCQGKCRETPPFFGYVRRSMNRAPGPNDRWWAEHQQNCGG TYVKISEPKKAVANRTSSLSMRKQKKVEKDESVGSRNLLVPSGTEGARPAGSLLFRRTAR DSASQAEVGETKLLSPRGHPRPAPQESRSRYPTLADVLNRNRVDRFRNLKTLADSKGSLS AVTPSQSASSSSPSVSASFPSLPSSSDSSLGLCSSFPSSSLNSPSPSRLPPPLHVSSCAS SSSSCASYTSSSAFSGSAADDGILREDDAVEVIAIRPACPLSSRTAPSARARLSDLSRSR AHRGSPAGEPGERGGDLLEVHGDTDANMQRRANALSETSADDDSDILFISSTRGVPPRSQ SSAVPSSSLKRDLVASELSARENKVPQRRPLPSASLSFVPSSSPAACPPSSSKACPSHLS TGRGAGDTVRDTPRSSSVTREPDASSCRFCERSFADPRALRRHIQCCLRDPDRLQGRTDL ASVPRDEGQRVGGSDRC
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NCLIV_063040.fa Sequence name : NCLIV_063040 Sequence length : 797 VALUES OF COMPUTED PARAMETERS Coef20 : 4.245 CoefTot : 0.000 ChDiff : 14 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.276 0.929 0.352 0.414 MesoH : 0.561 0.255 -0.059 0.176 MuHd_075 : 15.217 9.092 3.064 4.845 MuHd_095 : 37.056 11.556 7.423 6.944 MuHd_100 : 45.881 15.663 9.440 7.930 MuHd_105 : 46.955 18.473 9.754 7.907 Hmax_075 : -5.250 3.062 -2.746 1.278 Hmax_095 : -2.000 -0.087 -1.983 1.220 Hmax_100 : 4.000 3.400 -1.730 1.560 Hmax_105 : 12.400 10.100 1.767 3.580 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.6239 0.3761 DFMC : 0.7612 0.2388
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 797 NCLIV_063040 MDESRVSHRRASRVPEVGASAAEISELGTGERTEEKSDQDSEVEAVAVIKRRRIAGLSGGRFRDCFPKEEIPHQTPHQPD 80 SSPSSSEGSDSVHGNGARAHVSQPGSPPCSFAAGRMDDKTPPGELFSGALSSSSSSSSSPSSSSSLYSASSSFPSSPSSS 160 SSSSSCSSSSSLPSSSSSREVNLASLSIDGQAELVAPDLHALFAYYNDAFFEGKLSGVEVRWSKRMTLCAGLCVYQTGGY 240 CSVRLSEPLLKFRSVKEFRETLLHEMIHAFLFVSKRNRDHDAHGPDFLAHMRRLNALTGLNITVFHNFHDEVAHYRTHIW 320 RCQGKCRETPPFFGYVRRSMNRAPGPNDRWWAEHQQNCGGTYVKISEPKKAVANRTSSLSMRKQKKVEKDESVGSRNLLV 400 PSGTEGARPAGSLLFRRTARDSASQAEVGETKLLSPRGHPRPAPQESRSRYPTLADVLNRNRVDRFRNLKTLADSKGSLS 480 AVTPSQSASSSSPSVSASFPSLPSSSDSSLGLCSSFPSSSLNSPSPSRLPPPLHVSSCASSSSSCASYTSSSAFSGSAAD 560 DGILREDDAVEVIAIRPACPLSSRTAPSARARLSDLSRSRAHRGSPAGEPGERGGDLLEVHGDTDANMQRRANALSETSA 640 DDDSDILFISSTRGVPPRSQSSAVPSSSLKRDLVASELSARENKVPQRRPLPSASLSFVPSSSPAACPPSSSKACPSHLS 720 TGRGAGDTVRDTPRSSSVTREPDASSCRFCERSFADPRALRRHIQCCLRDPDRLQGRTDLASVPRDEGQRVGGSDRC 800 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ..........................................P..................................... 640 ................................................................................ 720 ............................................................................. 800 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ NCLIV_063040 5 --MDESR|VS 0.073 . NCLIV_063040 9 ESRVSHR|RA 0.140 . NCLIV_063040 10 SRVSHRR|AS 0.190 . NCLIV_063040 13 SHRRASR|VP 0.242 . NCLIV_063040 32 ELGTGER|TE 0.080 . NCLIV_063040 36 GERTEEK|SD 0.091 . NCLIV_063040 50 EAVAVIK|RR 0.063 . NCLIV_063040 51 AVAVIKR|RR 0.178 . NCLIV_063040 52 VAVIKRR|RI 0.124 . NCLIV_063040 53 AVIKRRR|IA 0.221 . NCLIV_063040 61 AGLSGGR|FR 0.067 . NCLIV_063040 63 LSGGRFR|DC 0.174 . NCLIV_063040 68 FRDCFPK|EE 0.070 . NCLIV_063040 98 VHGNGAR|AH 0.087 . NCLIV_063040 115 CSFAAGR|MD 0.115 . NCLIV_063040 119 AGRMDDK|TP 0.061 . NCLIV_063040 179 PSSSSSR|EV 0.121 . NCLIV_063040 214 DAFFEGK|LS 0.075 . NCLIV_063040 221 LSGVEVR|WS 0.094 . NCLIV_063040 224 VEVRWSK|RM 0.077 . NCLIV_063040 225 EVRWSKR|MT 0.195 . NCLIV_063040 244 GGYCSVR|LS 0.095 . NCLIV_063040 251 LSEPLLK|FR 0.076 . NCLIV_063040 253 EPLLKFR|SV 0.209 . NCLIV_063040 256 LKFRSVK|EF 0.150 . NCLIV_063040 259 RSVKEFR|ET 0.099 . NCLIV_063040 275 AFLFVSK|RN 0.062 . NCLIV_063040 276 FLFVSKR|NR 0.165 . NCLIV_063040 278 FVSKRNR|DH 0.187 . NCLIV_063040 292 DFLAHMR|RL 0.075 . NCLIV_063040 293 FLAHMRR|LN 0.114 . NCLIV_063040 316 DEVAHYR|TH 0.076 . NCLIV_063040 321 YRTHIWR|CQ 0.144 . NCLIV_063040 325 IWRCQGK|CR 0.070 . NCLIV_063040 327 RCQGKCR|ET 0.111 . NCLIV_063040 337 PFFGYVR|RS 0.069 . NCLIV_063040 338 FFGYVRR|SM 0.213 . NCLIV_063040 342 VRRSMNR|AP 0.120 . NCLIV_063040 349 APGPNDR|WW 0.107 . NCLIV_063040 364 CGGTYVK|IS 0.064 . NCLIV_063040 369 VKISEPK|KA 0.073 . NCLIV_063040 370 KISEPKK|AV 0.150 . NCLIV_063040 375 KKAVANR|TS 0.117 . NCLIV_063040 382 TSSLSMR|KQ 0.172 . NCLIV_063040 383 SSLSMRK|QK 0.075 . NCLIV_063040 385 LSMRKQK|KV 0.390 . NCLIV_063040 386 SMRKQKK|VE 0.104 . NCLIV_063040 389 KQKKVEK|DE 0.077 . NCLIV_063040 396 DESVGSR|NL 0.088 . NCLIV_063040 408 SGTEGAR|PA 0.107 . NCLIV_063040 416 AGSLLFR|RT 0.082 . NCLIV_063040 417 GSLLFRR|TA 0.211 . NCLIV_063040 420 LFRRTAR|DS 0.425 . NCLIV_063040 432 AEVGETK|LL 0.066 . NCLIV_063040 437 TKLLSPR|GH 0.081 . NCLIV_063040 441 SPRGHPR|PA 0.159 . NCLIV_063040 448 PAPQESR|SR 0.115 . NCLIV_063040 450 PQESRSR|YP 0.073 . NCLIV_063040 460 LADVLNR|NR 0.080 . NCLIV_063040 462 DVLNRNR|VD 0.058 . NCLIV_063040 465 NRNRVDR|FR 0.310 . NCLIV_063040 467 NRVDRFR|NL 0.098 . NCLIV_063040 470 DRFRNLK|TL 0.125 . NCLIV_063040 476 KTLADSK|GS 0.056 . NCLIV_063040 528 NSPSPSR|LP 0.067 . NCLIV_063040 565 ADDGILR|ED 0.085 . NCLIV_063040 576 VEVIAIR|PA 0.076 . NCLIV_063040 584 ACPLSSR|TA 0.080 . NCLIV_063040 590 RTAPSAR|AR 0.088 . NCLIV_063040 592 APSARAR|LS 0.135 . NCLIV_063040 598 RLSDLSR|SR 0.119 . NCLIV_063040 600 SDLSRSR|AH 0.088 . NCLIV_063040 603 SRSRAHR|GS 0.682 *ProP* NCLIV_063040 613 AGEPGER|GG 0.081 . NCLIV_063040 630 TDANMQR|RA 0.110 . NCLIV_063040 631 DANMQRR|AN 0.191 . NCLIV_063040 653 LFISSTR|GV 0.092 . NCLIV_063040 658 TRGVPPR|SQ 0.275 . NCLIV_063040 670 VPSSSLK|RD 0.059 . NCLIV_063040 671 PSSSLKR|DL 0.406 . NCLIV_063040 681 ASELSAR|EN 0.079 . NCLIV_063040 684 LSARENK|VP 0.090 . NCLIV_063040 688 ENKVPQR|RP 0.075 . NCLIV_063040 689 NKVPQRR|PL 0.124 . NCLIV_063040 713 CPPSSSK|AC 0.064 . NCLIV_063040 723 SHLSTGR|GA 0.140 . NCLIV_063040 730 GAGDTVR|DT 0.095 . NCLIV_063040 734 TVRDTPR|SS 0.155 . NCLIV_063040 740 RSSSVTR|EP 0.129 . NCLIV_063040 748 PDASSCR|FC 0.122 . NCLIV_063040 752 SCRFCER|SF 0.134 . NCLIV_063040 758 RSFADPR|AL 0.094 . NCLIV_063040 761 ADPRALR|RH 0.123 . NCLIV_063040 762 DPRALRR|HI 0.165 . NCLIV_063040 769 HIQCCLR|DP 0.095 . NCLIV_063040 773 CLRDPDR|LQ 0.083 . NCLIV_063040 777 PDRLQGR|TD 0.085 . NCLIV_063040 785 DLASVPR|DE 0.143 . NCLIV_063040 790 PRDEGQR|VG 0.074 . NCLIV_063040 796 RVGGSDR|C- 0.094 . ____________________________^_________________

  • Fasta :-

    >NCLIV_063040 ATGGACGAGTCACGAGTCTCCCACCGTCGTGCTAGTCGCGTGCCGGAAGTCGGCGCCTCT GCTGCCGAAATCTCAGAGCTGGGCACTGGCGAGAGGACAGAAGAAAAATCAGACCAGGAC AGCGAAGTGGAAGCCGTTGCCGTGATCAAGAGACGCAGAATAGCCGGCCTTTCGGGCGGG CGTTTCCGCGACTGTTTCCCTAAAGAAGAAATTCCGCATCAAACTCCACACCAACCTGAC AGTTCCCCATCGAGCTCAGAGGGGTCGGACTCAGTCCACGGAAACGGCGCCCGTGCCCAT GTTTCTCAGCCAGGCTCTCCTCCTTGCTCTTTCGCAGCAGGGAGGATGGATGATAAAACG CCCCCGGGTGAGCTCTTTTCCGGTGCTTTGTCCTCCTCGTCTTCTTCCTCTTCTTCCCCT TCTTCCTCGTCTTCCCTTTATTCCGCTTCTTCCTCGTTTCCATCTTCTCCCTCTTCTTCA TCTTCTTCCTCTTCTTGCTCGTCTTCATCTTCTTTGCCGTCCTCTTCTTCATCAAGAGAG GTGAACCTCGCTAGTCTCTCCATCGACGGTCAGGCCGAGCTGGTCGCACCAGATTTGCAT GCGCTCTTTGCGTATTACAATGACGCATTTTTCGAGGGGAAACTTAGCGGAGTGGAAGTC CGGTGGAGCAAGCGGATGACGCTCTGCGCTGGTCTCTGTGTCTATCAGACTGGTGGCTAC TGCTCCGTGCGCCTCTCCGAGCCGTTGCTCAAGTTCAGATCGGTCAAGGAATTCCGCGAA ACGCTCTTGCACGAGATGATTCACGCCTTCCTCTTTGTCTCGAAACGCAATCGTGACCAT GACGCTCACGGGCCTGACTTTCTGGCCCATATGCGGCGGCTGAATGCGTTAACTGGACTG AACATCACTGTTTTCCACAATTTCCATGACGAGGTCGCGCACTACCGCACGCACATATGG CGCTGTCAGGGGAAATGCCGAGAAACGCCGCCCTTCTTCGGTTACGTTCGACGGTCGATG AATCGTGCGCCAGGCCCAAACGACCGCTGGTGGGCGGAGCACCAGCAAAACTGTGGAGGC ACCTACGTGAAAATCAGCGAGCCTAAGAAGGCCGTCGCGAACCGAACTTCCTCTTTGTCG ATGAGAAAGCAGAAGAAGGTGGAGAAGGACGAGTCAGTTGGTTCGCGAAACCTCTTGGTG CCGAGCGGGACGGAAGGAGCGCGTCCGGCGGGGTCTCTGCTCTTTCGGCGAACTGCGCGA GACAGCGCATCCCAGGCCGAGGTGGGAGAAACGAAGTTGCTGTCTCCTCGGGGACACCCA CGGCCTGCACCCCAGGAAAGCCGAAGCCGGTACCCTACCCTCGCAGACGTCTTGAACAGA AACAGAGTCGATCGTTTCCGGAATTTAAAAACGCTTGCCGATTCCAAAGGCTCTTTGAGT GCCGTTACTCCCTCCCAGTCGGCTTCATCCTCATCTCCGTCTGTATCTGCCTCTTTCCCG TCTCTACCTTCCTCTTCGGATTCGTCTTTGGGTTTGTGCTCCTCCTTTCCCTCGTCTTCC CTCAATTCTCCCTCTCCTTCCCGGCTTCCTCCTCCTCTCCATGTTTCGTCTTGTGCTTCG TCTTCTTCATCCTGTGCTTCTTACACTTCGTCGTCGGCTTTCTCTGGTTCTGCTGCCGAC GATGGCATTCTCCGGGAAGATGATGCAGTTGAAGTGATCGCCATTCGTCCTGCCTGCCCC CTGTCTTCTCGAACGGCTCCTTCGGCTCGTGCGCGTCTCTCCGATCTCTCGCGTTCTCGG GCGCATCGAGGAAGCCCCGCAGGTGAACCGGGCGAGCGAGGCGGTGACCTGCTCGAGGTG CACGGCGACACGGACGCGAACATGCAGAGGCGAGCAAACGCGCTCTCGGAGACGTCCGCG GACGACGACTCGGATATTCTCTTCATTTCAAGCACGCGCGGTGTGCCGCCGCGTTCACAG TCCTCTGCTGTTCCTTCGTCTTCTCTAAAGCGAGACCTCGTGGCAAGCGAACTATCAGCA CGAGAAAACAAAGTGCCGCAGAGAAGGCCTCTTCCGTCGGCTTCGTTGTCTTTTGTTCCC TCTTCTTCTCCCGCTGCCTGTCCACCTTCCTCATCTAAAGCATGTCCTTCTCATCTGTCG ACAGGACGAGGCGCTGGTGACACGGTGCGCGACACCCCGAGGTCTTCCTCTGTGACTCGA GAGCCCGACGCTTCTTCATGTCGGTTCTGCGAAAGGAGCTTCGCGGATCCCCGCGCTCTG AGACGCCATATTCAGTGCTGCCTTCGAGATCCCGACCGTCTCCAAGGCCGCACCGACTTG GCCAGTGTCCCAAGAGACGAAGGACAACGCGTTGGTGGATCCGACAGATGCTGA
  • Download Fasta

  • Fasta :-

    MDESRVSHRRASRVPEVGASAAEISELGTGERTEEKSDQDSEVEAVAVIKRRRIAGLSGG RFRDCFPKEEIPHQTPHQPDSSPSSSEGSDSVHGNGARAHVSQPGSPPCSFAAGRMDDKT PPGELFSGALSSSSSSSSSPSSSSSLYSASSSFPSSPSSSSSSSSCSSSSSLPSSSSSRE VNLASLSIDGQAELVAPDLHALFAYYNDAFFEGKLSGVEVRWSKRMTLCAGLCVYQTGGY CSVRLSEPLLKFRSVKEFRETLLHEMIHAFLFVSKRNRDHDAHGPDFLAHMRRLNALTGL NITVFHNFHDEVAHYRTHIWRCQGKCRETPPFFGYVRRSMNRAPGPNDRWWAEHQQNCGG TYVKISEPKKAVANRTSSLSMRKQKKVEKDESVGSRNLLVPSGTEGARPAGSLLFRRTAR DSASQAEVGETKLLSPRGHPRPAPQESRSRYPTLADVLNRNRVDRFRNLKTLADSKGSLS AVTPSQSASSSSPSVSASFPSLPSSSDSSLGLCSSFPSSSLNSPSPSRLPPPLHVSSCAS SSSSCASYTSSSAFSGSAADDGILREDDAVEVIAIRPACPLSSRTAPSARARLSDLSRSR AHRGSPAGEPGERGGDLLEVHGDTDANMQRRANALSETSADDDSDILFISSTRGVPPRSQ SSAVPSSSLKRDLVASELSARENKVPQRRPLPSASLSFVPSSSPAACPPSSSKACPSHLS TGRGAGDTVRDTPRSSSVTREPDASSCRFCERSFADPRALRRHIQCCLRDPDRLQGRTDL ASVPRDEGQRVGGSDRC

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IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
NCLIV_06304037 STEEKSDQDS0.997unspNCLIV_06304037 STEEKSDQDS0.997unspNCLIV_06304037 STEEKSDQDS0.997unspNCLIV_06304041 SSDQDSEVEA0.996unspNCLIV_06304084 SDSSPSSSEG0.995unspNCLIV_06304085 SSSPSSSEGS0.997unspNCLIV_063040139 SSSSSSPSSS0.996unspNCLIV_063040156 SSFPSSPSSS0.995unspNCLIV_063040178 SSSSSSREVN0.99unspNCLIV_063040223 SEVRWSKRMT0.991unspNCLIV_063040339 SYVRRSMNRA0.995unspNCLIV_063040380 STSSLSMRKQ0.996unspNCLIV_063040422 STARDSASQA0.996unspNCLIV_063040435 STKLLSPRGH0.995unspNCLIV_063040490 SQSASSSSPS0.991unspNCLIV_063040494 SSSSPSVSAS0.992unspNCLIV_063040504 SPSLPSSSDS0.991unspNCLIV_063040523 SSSLNSPSPS0.993unspNCLIV_063040555 SSSAFSGSAA0.993unspNCLIV_063040605 SAHRGSPAGE0.995unspNCLIV_063040728 TGAGDTVRDT0.991unspNCLIV_063040732 TTVRDTPRSS0.993unspNCLIV_063040735 SDTPRSSSVT0.99unspNCLIV_063040737 SPRSSSVTRE0.997unspNCLIV_0630407 SESRVSHRRA0.998unspNCLIV_06304012 SHRRASRVPE0.996unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India