NCLIV_064430 | putative subtilase family serine protease

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0004252      

  • Computed_GO_Functions:  serine-type endopeptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
NCLIV_064430OTHER0.9995200.0001210.000359
No Results

  • Fasta :-

    >NCLIV_064430 MFFTWVGARKSDVDKLDCERRPGPEEERIIESAGELKPMDPAQARQDRIEALKRLQKEVE ASPTDRVIVEWDTTCLKDLPSRVAESTAAQDDGSVPVFDEYELHDSSERIVLKRGVYLRD RIGVKDKTDPEVRQTLRGREYALGIIASALGLQVWGPASGAPCEGQCRKALQSVMLAKDV PTLEAAHYSRLGVDVLHLKNLRKQKEDFVGDQAYPFVDDLGHGTSVTSVLAARHGNNAGG RGIMSTGKVMCLRVGGRDGIWLSDTIPALDYALRMGAKVSNHSYGGKGFDQAEFTAFRRA SEADHLAVTAAGNSGCDVDSDDTCLFTPGAFDLEGILNVGANDVTGHRATFSNYGKNAVD VFAPGQSIFVGTNKMPNQVEKTCKYCYEFIDGTSFAAPMVSGMAAALWTHFEITQPVGWV QNTKKKSMRVKEAIMYSVTGSQGVAGAGRVNGVVNFYKALHYYDTVPPAYKAEFPDPNGG YQAQGSVSHKLSTSWSSSLGLLFVLLAPLAQHAWFLTSH
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NCLIV_064430.fa Sequence name : NCLIV_064430 Sequence length : 519 VALUES OF COMPUTED PARAMETERS Coef20 : 4.036 CoefTot : 0.025 ChDiff : -6 ZoneTo : 11 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.871 1.671 0.222 0.713 MesoH : -0.142 0.179 -0.338 0.248 MuHd_075 : 20.172 13.950 6.595 5.829 MuHd_095 : 9.278 4.113 2.260 0.710 MuHd_100 : 7.423 7.601 1.367 1.678 MuHd_105 : 3.856 9.718 0.150 1.843 Hmax_075 : -3.325 5.862 -0.698 2.800 Hmax_095 : 1.300 7.000 -0.538 2.231 Hmax_100 : 1.000 6.100 -0.829 1.910 Hmax_105 : 3.617 15.517 0.198 3.733 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9738 0.0262 DFMC : 0.9600 0.0400
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 519 NCLIV_064430 MFFTWVGARKSDVDKLDCERRPGPEEERIIESAGELKPMDPAQARQDRIEALKRLQKEVEASPTDRVIVEWDTTCLKDLP 80 SRVAESTAAQDDGSVPVFDEYELHDSSERIVLKRGVYLRDRIGVKDKTDPEVRQTLRGREYALGIIASALGLQVWGPASG 160 APCEGQCRKALQSVMLAKDVPTLEAAHYSRLGVDVLHLKNLRKQKEDFVGDQAYPFVDDLGHGTSVTSVLAARHGNNAGG 240 RGIMSTGKVMCLRVGGRDGIWLSDTIPALDYALRMGAKVSNHSYGGKGFDQAEFTAFRRASEADHLAVTAAGNSGCDVDS 320 DDTCLFTPGAFDLEGILNVGANDVTGHRATFSNYGKNAVDVFAPGQSIFVGTNKMPNQVEKTCKYCYEFIDGTSFAAPMV 400 SGMAAALWTHFEITQPVGWVQNTKKKSMRVKEAIMYSVTGSQGVAGAGRVNGVVNFYKALHYYDTVPPAYKAEFPDPNGG 480 YQAQGSVSHKLSTSWSSSLGLLFVLLAPLAQHAWFLTSH 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ....................................... 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NCLIV_064430 9 FTWVGAR|KS 0.078 . NCLIV_064430 10 TWVGARK|SD 0.137 . NCLIV_064430 15 RKSDVDK|LD 0.073 . NCLIV_064430 20 DKLDCER|RP 0.079 . NCLIV_064430 21 KLDCERR|PG 0.127 . NCLIV_064430 28 PGPEEER|II 0.087 . NCLIV_064430 37 ESAGELK|PM 0.068 . NCLIV_064430 45 MDPAQAR|QD 0.089 . NCLIV_064430 48 AQARQDR|IE 0.212 . NCLIV_064430 53 DRIEALK|RL 0.065 . NCLIV_064430 54 RIEALKR|LQ 0.180 . NCLIV_064430 57 ALKRLQK|EV 0.214 . NCLIV_064430 66 EASPTDR|VI 0.101 . NCLIV_064430 77 WDTTCLK|DL 0.058 . NCLIV_064430 82 LKDLPSR|VA 0.086 . NCLIV_064430 109 LHDSSER|IV 0.087 . NCLIV_064430 113 SERIVLK|RG 0.058 . NCLIV_064430 114 ERIVLKR|GV 0.256 . NCLIV_064430 119 KRGVYLR|DR 0.124 . NCLIV_064430 121 GVYLRDR|IG 0.067 . NCLIV_064430 125 RDRIGVK|DK 0.071 . NCLIV_064430 127 RIGVKDK|TD 0.071 . NCLIV_064430 133 KTDPEVR|QT 0.083 . NCLIV_064430 137 EVRQTLR|GR 0.098 . NCLIV_064430 139 RQTLRGR|EY 0.084 . NCLIV_064430 168 PCEGQCR|KA 0.090 . NCLIV_064430 169 CEGQCRK|AL 0.087 . NCLIV_064430 178 QSVMLAK|DV 0.119 . NCLIV_064430 190 EAAHYSR|LG 0.092 . NCLIV_064430 199 VDVLHLK|NL 0.063 . NCLIV_064430 202 LHLKNLR|KQ 0.064 . NCLIV_064430 203 HLKNLRK|QK 0.100 . NCLIV_064430 205 KNLRKQK|ED 0.149 . NCLIV_064430 233 TSVLAAR|HG 0.096 . NCLIV_064430 241 GNNAGGR|GI 0.139 . NCLIV_064430 248 GIMSTGK|VM 0.056 . NCLIV_064430 253 GKVMCLR|VG 0.090 . NCLIV_064430 257 CLRVGGR|DG 0.095 . NCLIV_064430 274 ALDYALR|MG 0.083 . NCLIV_064430 278 ALRMGAK|VS 0.067 . NCLIV_064430 287 NHSYGGK|GF 0.108 . NCLIV_064430 298 AEFTAFR|RA 0.099 . NCLIV_064430 299 EFTAFRR|AS 0.120 . NCLIV_064430 348 NDVTGHR|AT 0.074 . NCLIV_064430 356 TFSNYGK|NA 0.080 . NCLIV_064430 374 IFVGTNK|MP 0.075 . NCLIV_064430 381 MPNQVEK|TC 0.072 . NCLIV_064430 384 QVEKTCK|YC 0.079 . NCLIV_064430 424 GWVQNTK|KK 0.064 . NCLIV_064430 425 WVQNTKK|KS 0.101 . NCLIV_064430 426 VQNTKKK|SM 0.233 . NCLIV_064430 429 TKKKSMR|VK 0.155 . NCLIV_064430 431 KKSMRVK|EA 0.091 . NCLIV_064430 449 GVAGAGR|VN 0.100 . NCLIV_064430 458 GVVNFYK|AL 0.071 . NCLIV_064430 471 TVPPAYK|AE 0.061 . NCLIV_064430 490 QGSVSHK|LS 0.068 . ____________________________^_________________

  • Fasta :-

    >NCLIV_064430 ATGTTTTTCACCTGGGTTGGTGCTCGGAAGTCTGATGTAGACAAGCTGGACTGTGAGCGC CGACCTGGTCCAGAAGAAGAACGCATCATCGAGAGCGCTGGAGAACTCAAGCCTATGGAT CCCGCACAAGCTCGACAGGATCGCATCGAGGCTCTAAAGAGACTACAAAAGGAAGTAGAA GCAAGCCCAACGGACCGCGTCATCGTGGAGTGGGATACGACCTGCCTTAAGGATCTTCCG TCAAGAGTGGCGGAATCCACGGCTGCTCAGGATGATGGCTCCGTTCCCGTCTTCGACGAG TACGAGCTTCACGACTCGTCGGAGCGAATCGTATTGAAGCGAGGAGTTTATCTAAGAGAC AGGATCGGAGTAAAGGACAAAACCGACCCCGAAGTTCGCCAGACGCTCAGAGGACGTGAA TATGCTCTGGGCATCATTGCCAGCGCTTTAGGTCTCCAAGTATGGGGTCCTGCAAGCGGG GCACCCTGCGAGGGACAGTGTAGAAAGGCGCTGCAGAGTGTCATGCTCGCGAAAGACGTA CCGACGCTTGAAGCGGCACACTATTCGCGACTCGGTGTCGACGTCTTGCACCTCAAAAAT CTAAGAAAGCAGAAGGAGGACTTTGTTGGAGACCAAGCTTATCCTTTCGTTGACGACCTC GGCCACGGGACGTCCGTGACATCTGTTCTTGCAGCCCGACACGGTAACAACGCTGGCGGC AGAGGCATCATGTCGACTGGCAAGGTCATGTGCCTGCGAGTGGGTGGGCGCGACGGTATT TGGCTTTCCGACACCATTCCTGCGCTCGATTACGCTTTGAGAATGGGTGCCAAGGTGTCC AACCATTCGTACGGTGGGAAAGGGTTCGACCAAGCGGAATTCACGGCTTTTCGACGAGCA TCTGAAGCTGACCACTTAGCTGTTACGGCAGCTGGTAACAGTGGCTGCGACGTCGACAGC GATGACACCTGCCTGTTCACTCCCGGGGCTTTCGATCTCGAGGGCATCCTGAATGTTGGA GCGAATGATGTCACCGGGCACCGGGCGACCTTTTCTAATTACGGGAAGAACGCTGTCGAC GTGTTTGCTCCGGGACAAAGCATATTCGTCGGGACCAACAAAATGCCAAACCAGGTGGAA AAAACATGCAAGTATTGCTACGAGTTTATAGACGGCACATCTTTCGCCGCGCCGATGGTG TCCGGGATGGCAGCTGCTCTATGGACGCATTTTGAGATAACACAACCAGTCGGCTGGGTC CAGAATACCAAAAAGAAAAGTATGCGGGTCAAGGAGGCAATTATGTATTCGGTGACTGGC TCGCAAGGCGTTGCAGGTGCTGGAAGAGTAAACGGCGTCGTCAATTTTTACAAAGCTCTC CACTATTACGACACAGTCCCCCCTGCCTACAAAGCGGAGTTTCCGGACCCAAATGGCGGC TATCAAGCTCAGGGAAGCGTCTCCCACAAGCTTTCCACCTCATGGAGTTCCTCCTTAGGC CTTCTGTTCGTTTTATTGGCACCTCTGGCCCAACACGCCTGGTTTCTGACGTCCCATTGA
  • Download Fasta

  • Fasta :-

    MFFTWVGARKSDVDKLDCERRPGPEEERIIESAGELKPMDPAQARQDRIEALKRLQKEVE ASPTDRVIVEWDTTCLKDLPSRVAESTAAQDDGSVPVFDEYELHDSSERIVLKRGVYLRD RIGVKDKTDPEVRQTLRGREYALGIIASALGLQVWGPASGAPCEGQCRKALQSVMLAKDV PTLEAAHYSRLGVDVLHLKNLRKQKEDFVGDQAYPFVDDLGHGTSVTSVLAARHGNNAGG RGIMSTGKVMCLRVGGRDGIWLSDTIPALDYALRMGAKVSNHSYGGKGFDQAEFTAFRRA SEADHLAVTAAGNSGCDVDSDDTCLFTPGAFDLEGILNVGANDVTGHRATFSNYGKNAVD VFAPGQSIFVGTNKMPNQVEKTCKYCYEFIDGTSFAAPMVSGMAAALWTHFEITQPVGWV QNTKKKSMRVKEAIMYSVTGSQGVAGAGRVNGVVNFYKALHYYDTVPPAYKAEFPDPNGG YQAQGSVSHKLSTSWSSSLGLLFVLLAPLAQHAWFLTSH

  • title: active site
  • coordinates: H222,Y284,S394
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
NCLIV_064430301 SFRRASEADH0.997unspNCLIV_064430301 SFRRASEADH0.997unspNCLIV_064430301 SFRRASEADH0.997unspNCLIV_06443011 SGARKSDVDK0.99unspNCLIV_06443062 SEVEASPTDR0.996unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India