NCLIV_064590 | unspecified product

  • Computed_GO_Component_IDs:  GO:0016020      

  • Computed_GO_Components:  membrane      

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:  GO:0009405      

  • Computed_GO_Processes:  pathogenesis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

No Results
No Results

  • Fasta :-

    >NCLIV_064590 MAAIVSLLSWRTLRPVVLVLLAHSCSSDALNVDRLPRPSRLALAETAATPEINPWAGLLE KYNVPLVHGSGVYVDLGNTKRLHGKNYREPGGLCPNFGKYIETHQPTRNAEIWPNNFLKP VPYAKSAQDTKPLGGGFAMPMTVISPKSLDELKYHAQTFDKKPDASDYAKKFVKDIKDDL GYCIWWARMTSVHDSDAAAVNMSKEDYYRYAFAYDAKNSTCHIMYLNMQEMTGAGTYCKN GDSGPDLSWYCFNPKKSVDSGLVWGSAYARLDHATACPEHGLKNVHWGQWNGVSCQRMAV RKRISVSDAAECATQLFANSPSDNPTKYVGDEGRGLDKIYKDFVAVLFPAGAGGSDQPHS RGAGVNWANFYKAGNTCEMYDGVPDCLTSAPGQYAFVSLADPDPNNAQLPPCTQDSDGIS IPSNSCTCAAGSLSGTTAGAKCEDGKWIDSSVPCTCEPDEEDDSVNVWLIAGPCIAAAVL LLGGAAYWIARRKKEEPEVGKPNIVDETREHAVRARQNQADLLQEAEPSFWGEAASQPTN VILEPGAIDRDF
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NCLIV_064590.fa Sequence name : NCLIV_064590 Sequence length : 552 VALUES OF COMPUTED PARAMETERS Coef20 : 5.206 CoefTot : 1.493 ChDiff : -13 ZoneTo : 27 KR : 2 DE : 0 CleavSite : 16 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.041 2.294 0.490 0.827 MesoH : -0.287 0.382 -0.167 0.259 MuHd_075 : 17.536 18.209 5.587 4.899 MuHd_095 : 25.792 17.334 6.814 5.870 MuHd_100 : 23.940 11.060 5.745 4.679 MuHd_105 : 23.754 7.059 5.104 4.780 Hmax_075 : 16.900 21.200 3.745 6.370 Hmax_095 : 16.188 20.300 4.998 6.099 Hmax_100 : 15.200 18.700 3.207 4.850 Hmax_105 : 14.350 16.800 2.858 4.630 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.4940 0.5060 DFMC : 0.5968 0.4032
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 552 NCLIV_064590 MAAIVSLLSWRTLRPVVLVLLAHSCSSDALNVDRLPRPSRLALAETAATPEINPWAGLLEKYNVPLVHGSGVYVDLGNTK 80 RLHGKNYREPGGLCPNFGKYIETHQPTRNAEIWPNNFLKPVPYAKSAQDTKPLGGGFAMPMTVISPKSLDELKYHAQTFD 160 KKPDASDYAKKFVKDIKDDLGYCIWWARMTSVHDSDAAAVNMSKEDYYRYAFAYDAKNSTCHIMYLNMQEMTGAGTYCKN 240 GDSGPDLSWYCFNPKKSVDSGLVWGSAYARLDHATACPEHGLKNVHWGQWNGVSCQRMAVRKRISVSDAAECATQLFANS 320 PSDNPTKYVGDEGRGLDKIYKDFVAVLFPAGAGGSDQPHSRGAGVNWANFYKAGNTCEMYDGVPDCLTSAPGQYAFVSLA 400 DPDPNNAQLPPCTQDSDGISIPSNSCTCAAGSLSGTTAGAKCEDGKWIDSSVPCTCEPDEEDDSVNVWLIAGPCIAAAVL 480 LLGGAAYWIARRKKEEPEVGKPNIVDETREHAVRARQNQADLLQEAEPSFWGEAASQPTNVILEPGAIDRDF 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ........................................................................ 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NCLIV_064590 11 VSLLSWR|TL 0.087 . NCLIV_064590 14 LSWRTLR|PV 0.303 . NCLIV_064590 34 DALNVDR|LP 0.080 . NCLIV_064590 37 NVDRLPR|PS 0.179 . NCLIV_064590 40 RLPRPSR|LA 0.250 . NCLIV_064590 61 WAGLLEK|YN 0.065 . NCLIV_064590 80 VDLGNTK|RL 0.058 . NCLIV_064590 81 DLGNTKR|LH 0.170 . NCLIV_064590 85 TKRLHGK|NY 0.072 . NCLIV_064590 88 LHGKNYR|EP 0.101 . NCLIV_064590 99 LCPNFGK|YI 0.091 . NCLIV_064590 108 ETHQPTR|NA 0.111 . NCLIV_064590 119 WPNNFLK|PV 0.093 . NCLIV_064590 125 KPVPYAK|SA 0.114 . NCLIV_064590 131 KSAQDTK|PL 0.094 . NCLIV_064590 147 MTVISPK|SL 0.094 . NCLIV_064590 153 KSLDELK|YH 0.061 . NCLIV_064590 161 HAQTFDK|KP 0.069 . NCLIV_064590 162 AQTFDKK|PD 0.071 . NCLIV_064590 170 DASDYAK|KF 0.067 . NCLIV_064590 171 ASDYAKK|FV 0.224 . NCLIV_064590 174 YAKKFVK|DI 0.085 . NCLIV_064590 177 KFVKDIK|DD 0.066 . NCLIV_064590 188 YCIWWAR|MT 0.107 . NCLIV_064590 204 AAVNMSK|ED 0.054 . NCLIV_064590 209 SKEDYYR|YA 0.116 . NCLIV_064590 217 AFAYDAK|NS 0.065 . NCLIV_064590 239 GAGTYCK|NG 0.065 . NCLIV_064590 255 WYCFNPK|KS 0.062 . NCLIV_064590 256 YCFNPKK|SV 0.321 . NCLIV_064590 270 WGSAYAR|LD 0.093 . NCLIV_064590 283 CPEHGLK|NV 0.084 . NCLIV_064590 297 NGVSCQR|MA 0.091 . NCLIV_064590 301 CQRMAVR|KR 0.080 . NCLIV_064590 302 QRMAVRK|RI 0.124 . NCLIV_064590 303 RMAVRKR|IS 0.155 . NCLIV_064590 327 PSDNPTK|YV 0.134 . NCLIV_064590 334 YVGDEGR|GL 0.146 . NCLIV_064590 338 EGRGLDK|IY 0.060 . NCLIV_064590 341 GLDKIYK|DF 0.072 . NCLIV_064590 361 SDQPHSR|GA 0.177 . NCLIV_064590 372 NWANFYK|AG 0.074 . NCLIV_064590 441 GTTAGAK|CE 0.058 . NCLIV_064590 446 AKCEDGK|WI 0.079 . NCLIV_064590 491 AAYWIAR|RK 0.082 . NCLIV_064590 492 AYWIARR|KK 0.110 . NCLIV_064590 493 YWIARRK|KE 0.082 . NCLIV_064590 494 WIARRKK|EE 0.283 . NCLIV_064590 501 EEPEVGK|PN 0.064 . NCLIV_064590 509 NIVDETR|EH 0.071 . NCLIV_064590 514 TREHAVR|AR 0.095 . NCLIV_064590 516 EHAVRAR|QN 0.126 . NCLIV_064590 550 EPGAIDR|DF 0.117 . ____________________________^_________________

  • Fasta :-

    >NCLIV_064590 ATGGCAGCGATCGTCTCCCTGCTGTCCTGGCGGACCTTGCGGCCAGTCGTCCTCGTGCTG CTTGCCCACTCGTGCAGCTCTGACGCACTCAATGTGGATCGTCTTCCTCGTCCCTCCAGA CTCGCTCTCGCAGAGACGGCAGCAACCCCCGAAATCAATCCATGGGCCGGCCTCCTGGAG AAATACAACGTCCCTCTGGTGCACGGTTCTGGCGTGTACGTCGACCTCGGGAACACCAAG CGGCTCCACGGCAAGAACTACCGCGAGCCCGGAGGCTTGTGCCCGAACTTTGGCAAGTAC ATCGAAACCCACCAGCCAACGAGGAACGCAGAAATCTGGCCGAACAACTTCTTGAAGCCT GTGCCCTACGCGAAATCCGCGCAAGACACGAAACCGCTCGGAGGAGGATTTGCTATGCCC ATGACTGTAATCAGTCCGAAATCGCTCGATGAGCTGAAGTACCACGCGCAAACGTTTGAC AAAAAGCCCGACGCTTCGGATTACGCCAAGAAGTTCGTAAAGGACATCAAAGACGACTTG GGCTACTGCATCTGGTGGGCACGAATGACTTCCGTGCATGACTCGGATGCGGCGGCCGTG AACATGTCGAAAGAAGACTACTACCGATACGCCTTTGCGTACGACGCGAAAAACTCCACG TGCCACATCATGTATCTGAACATGCAGGAGATGACGGGCGCCGGAACGTACTGCAAAAAC GGCGATTCGGGTCCAGACCTGAGTTGGTACTGCTTCAATCCGAAGAAGTCCGTGGACAGC GGCCTCGTCTGGGGAAGTGCCTACGCGCGACTCGACCATGCAACCGCATGTCCGGAGCAC GGTCTGAAGAACGTCCACTGGGGGCAATGGAATGGGGTGTCCTGCCAAAGAATGGCTGTC CGGAAGCGGATCTCCGTCAGCGACGCGGCGGAATGCGCCACGCAGCTGTTTGCAAACAGC CCAAGTGACAACCCGACCAAGTACGTCGGCGACGAGGGACGTGGACTGGATAAAATCTAC AAAGACTTCGTTGCAGTTCTGTTCCCAGCGGGAGCCGGCGGGAGCGATCAGCCCCACTCT CGCGGAGCGGGGGTTAACTGGGCGAACTTCTACAAGGCTGGAAACACATGCGAAATGTAC GATGGCGTCCCGGACTGCCTGACGTCGGCTCCAGGCCAGTACGCGTTTGTGAGTCTCGCG GACCCGGACCCGAACAACGCGCAGCTCCCGCCGTGTACACAGGACAGCGACGGCATCAGC ATTCCTTCGAACTCGTGCACCTGCGCTGCCGGCTCCCTCTCCGGAACGACCGCAGGGGCG AAGTGCGAAGACGGAAAGTGGATAGATTCTTCCGTCCCCTGCACATGCGAGCCCGACGAG GAAGACGACAGTGTCAACGTCTGGCTGATTGCAGGTCCATGCATTGCCGCCGCCGTCCTG CTGCTCGGAGGAGCGGCGTACTGGATCGCCCGAAGGAAGAAGGAGGAACCGGAGGTTGGA AAGCCCAACATCGTGGACGAGACAAGGGAGCACGCGGTTCGAGCTCGCCAGAACCAAGCA GATTTGCTACAGGAAGCGGAGCCTTCTTTCTGGGGAGAAGCTGCCAGTCAGCCCACAAAC GTCATCCTCGAACCCGGGGCAATCGACAGGGACTTCTAA
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  • Fasta :-

    No Results
    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
NCLIV_064590203 SAVNMSKEDY0.995unspNCLIV_064590203 SAVNMSKEDY0.995unspNCLIV_064590203 SAVNMSKEDY0.995unspNCLIV_064590305 SRKRISVSDA0.998unspNCLIV_064590320 SLFANSPSDN0.995unspNCLIV_064590145 SMTVISPKSL0.991unspNCLIV_064590191 SARMTSVHDS0.995unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India