NCLIV_065550 | hypothetical protein

UniProt_ID: F0VQY2

Computed_GO_Component_IDs:
Computed_GO_Components:
Computed_GO_Function_IDs: GO:0016787
Computed_GO_Functions: hydrolase activity
Computed_GO_Process_IDs:
Computed_GO_Processes:
Curated_GO_Component_IDs:
Curated_GO_Components:
Curated_GO_Function_IDs:
Curated_GO_Functions:
Curated_GO_Processes:

	_ID	Prediction	OTHER	SP	mTP	CS_Position
	NCLIV_065550	OTHER	1.000000	0.000000	0.000000

No Results

Fasta :-
>NCLIV_065550 MGPPSPPHQASGVSGKKTGNGETLSTSPSQHEAKGEAREVTRQPAAAEEPRRERRASAKR TDRRTSSGTSPTSLHSLDSEEVQSGRQHVPTYSLAGSPVKLDGVLWVAESLAFAELSHPS DASPSAHAQSQSAAPYASASRSGEEARSPETGMSGRSSEDEGAADAANFYNLHVGNFPLA LLVHQYTLMGGQRGLVEGKARILAARGIPSITFNLRGAGASGGRATFTGSSEVNDTVAVC EWAKKSLGATNIFLIGTSAGAPISGSAVPLVPEVKGWVGIGYTFGFFASLLFSRHFQSIL ENPKPKLFVHAGADGFTSTSTFEHYFKKAAEPKEQLTIDEVGHFELEGPYYDPFLCRVIF QFVEKYSSTPPLRPGPSPASV
Download Fasta

MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NCLIV_065550.fa Sequence name : NCLIV_065550 Sequence length : 381 VALUES OF COMPUTED PARAMETERS Coef20 : 2.461 CoefTot : -2.539 ChDiff : -2 ZoneTo : 21 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.041 1.412 0.298 0.758 MesoH : 0.434 0.644 -0.123 0.381 MuHd_075 : 13.302 7.094 4.687 2.026 MuHd_095 : 21.134 9.606 7.257 3.363 MuHd_100 : 18.316 5.791 5.450 2.546 MuHd_105 : 14.578 3.369 3.833 1.478 Hmax_075 : 8.167 0.117 -0.119 0.560 Hmax_095 : 5.800 -1.400 -0.185 1.234 Hmax_100 : 4.600 -2.300 -0.796 0.930 Hmax_105 : 2.400 -2.217 -2.030 0.945 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9656 0.0344 DFMC : 0.9054 0.0946

##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 381 NCLIV_065550 MGPPSPPHQASGVSGKKTGNGETLSTSPSQHEAKGEAREVTRQPAAAEEPRRERRASAKRTDRRTSSGTSPTSLHSLDSE 80 EVQSGRQHVPTYSLAGSPVKLDGVLWVAESLAFAELSHPSDASPSAHAQSQSAAPYASASRSGEEARSPETGMSGRSSED 160 EGAADAANFYNLHVGNFPLALLVHQYTLMGGQRGLVEGKARILAARGIPSITFNLRGAGASGGRATFTGSSEVNDTVAVC 240 EWAKKSLGATNIFLIGTSAGAPISGSAVPLVPEVKGWVGIGYTFGFFASLLFSRHFQSILENPKPKLFVHAGADGFTSTS 320 TFEHYFKKAAEPKEQLTIDEVGHFELEGPYYDPFLCRVIFQFVEKYSSTPPLRPGPSPASV 400 ......................................................P......................... 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ............................................................. 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ NCLIV_065550 16 ASGVSGK|KT 0.115 . NCLIV_065550 17 SGVSGKK|TG 0.075 . NCLIV_065550 34 PSQHEAK|GE 0.074 . NCLIV_065550 38 EAKGEAR|EV 0.159 . NCLIV_065550 42 EAREVTR|QP 0.098 . NCLIV_065550 51 AAAEEPR|RE 0.075 . NCLIV_065550 52 AAEEPRR|ER 0.111 . NCLIV_065550 54 EEPRRER|RA 0.298 . NCLIV_065550 55 EPRRERR|AS 0.538 *ProP* NCLIV_065550 59 ERRASAK|RT 0.083 . NCLIV_065550 60 RRASAKR|TD 0.160 . NCLIV_065550 63 SAKRTDR|RT 0.271 . NCLIV_065550 64 AKRTDRR|TS 0.168 . NCLIV_065550 86 EEVQSGR|QH 0.072 . NCLIV_065550 100 LAGSPVK|LD 0.062 . NCLIV_065550 141 PYASASR|SG 0.110 . NCLIV_065550 147 RSGEEAR|SP 0.238 . NCLIV_065550 156 ETGMSGR|SS 0.226 . NCLIV_065550 193 TLMGGQR|GL 0.102 . NCLIV_065550 199 RGLVEGK|AR 0.061 . NCLIV_065550 201 LVEGKAR|IL 0.096 . NCLIV_065550 206 ARILAAR|GI 0.124 . NCLIV_065550 216 SITFNLR|GA 0.147 . NCLIV_065550 224 AGASGGR|AT 0.093 . NCLIV_065550 244 AVCEWAK|KS 0.063 . NCLIV_065550 245 VCEWAKK|SL 0.152 . NCLIV_065550 275 PLVPEVK|GW 0.070 . NCLIV_065550 294 ASLLFSR|HF 0.089 . NCLIV_065550 304 SILENPK|PK 0.056 . NCLIV_065550 306 LENPKPK|LF 0.081 . NCLIV_065550 327 TFEHYFK|KA 0.066 . NCLIV_065550 328 FEHYFKK|AA 0.232 . NCLIV_065550 333 KKAAEPK|EQ 0.068 . NCLIV_065550 357 YDPFLCR|VI 0.090 . NCLIV_065550 365 IFQFVEK|YS 0.069 . NCLIV_065550 373 SSTPPLR|PG 0.067 . ____________________________^_________________

Fasta :-
>NCLIV_065550 ATGGGCCCCCCGTCGCCCCCGCACCAAGCCTCCGGAGTGTCCGGAAAGAAGACTGGAAAC GGCGAGACTCTGAGCACCTCGCCTTCGCAGCATGAGGCGAAAGGGGAGGCGCGTGAAGTG ACAAGACAACCCGCGGCTGCGGAGGAACCTCGGAGGGAGAGGCGAGCGTCTGCGAAACGC ACAGACCGTCGCACCTCTTCAGGAACATCTCCAACCTCGCTGCACTCCCTGGATTCCGAA GAGGTCCAATCTGGACGGCAACATGTGCCCACGTACAGCCTGGCTGGGAGTCCAGTAAAG CTCGACGGCGTTCTCTGGGTGGCCGAGTCTCTCGCGTTCGCTGAGCTCTCTCACCCCTCA GACGCTTCCCCGTCGGCGCACGCTCAGTCGCAGTCCGCTGCTCCATATGCGTCCGCGTCT CGGAGTGGGGAAGAGGCGAGATCGCCGGAGACAGGAATGAGCGGGCGATCCAGTGAGGAC GAGGGAGCGGCGGACGCTGCGAATTTCTACAATCTGCACGTTGGGAACTTCCCCCTCGCC CTCCTGGTCCACCAGTACACTCTCATGGGAGGCCAGAGGGGGCTGGTTGAGGGCAAGGCT CGGATCCTCGCAGCCCGCGGAATTCCGAGCATCACATTCAACTTGAGAGGCGCTGGCGCC TCTGGCGGGAGGGCAACCTTTACGGGGAGTTCGGAAGTGAACGACACTGTGGCGGTGTGC GAATGGGCGAAGAAGTCTCTCGGAGCGACAAACATTTTCCTCATCGGCACTTCCGCAGGC GCCCCTATCAGCGGCAGCGCTGTGCCTCTCGTCCCCGAGGTGAAAGGCTGGGTCGGGATA GGCTATACCTTTGGCTTCTTTGCGTCTCTTCTCTTCAGCCGCCACTTCCAGAGCATTCTC GAGAACCCGAAGCCGAAACTGTTTGTCCACGCGGGCGCGGACGGGTTTACGTCCACCTCC ACTTTTGAGCACTATTTCAAAAAAGCTGCCGAGCCGAAGGAGCAACTTACCATCGACGAA GTTGGTCACTTTGAACTGGAGGGCCCTTACTATGACCCCTTTCTCTGCCGCGTCATTTTC CAGTTCGTTGAAAAGTACTCGTCGACGCCTCCCCTCCGTCCGGGGCCGTCGCCAGCCTCC GTTTAA
Download Fasta

Fasta :-

MGPPSPPHQASGVSGKKTGNGETLSTSPSQHEAKGEAREVTRQPAAAEEPRRERRASAKR TDRRTSSGTSPTSLHSLDSEEVQSGRQHVPTYSLAGSPVKLDGVLWVAESLAFAELSHPS DASPSAHAQSQSAAPYASASRSGEEARSPETGMSGRSSEDEGAADAANFYNLHVGNFPLA LLVHQYTLMGGQRGLVEGKARILAARGIPSITFNLRGAGASGGRATFTGSSEVNDTVAVC EWAKKSLGATNIFLIGTSAGAPISGSAVPLVPEVKGWVGIGYTFGFFASLLFSRHFQSIL ENPKPKLFVHAGADGFTSTSTFEHYFKKAAEPKEQLTIDEVGHFELEGPYYDPFLCRVIF QFVEKYSSTPPLRPGPSPASV

Atu1826-like

No Results

	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method
	NCLIV_065550	66 S	DRRTSSGTS	0.998	unsp	NCLIV_065550	66 S	DRRTSSGTS	0.998	unsp	NCLIV_065550	66 S	DRRTSSGTS	0.998	unsp	NCLIV_065550	70 S	SSGTSPTSL	0.995	unsp	NCLIV_065550	142 S	SASRSGEEA	0.997	unsp	NCLIV_065550	148 S	EEARSPETG	0.995	unsp	NCLIV_065550	157 S	MSGRSSEDE	0.997	unsp	NCLIV_065550	158 S	SGRSSEDEG	0.998	unsp	NCLIV_065550	27 S	TLSTSPSQH	0.992	unsp	NCLIV_065550	57 S	ERRASAKRT	0.998	unsp

NCLIV_065550 | hypothetical protein

ID's

UniProt_ID: F0VQY2

GEO Functions

Computed_GO_Component_IDs:

Computed_GO_Components:

Computed_GO_Function_IDs: GO:0016787

Computed_GO_Functions: hydrolase activity

Computed_GO_Process_IDs:

Computed_GO_Processes:

Curated_GO_Component_IDs:

Curated_GO_Components:

Curated_GO_Function_IDs:

Curated_GO_Functions:

Curated_GO_Processes:

Subcellular Localization

Targetp

Signalp

Fasta :-

Mitoprot

ProPeptide Prediction

Sequence

Nucleotide sequence

Fasta :-

Protein sequence

Fasta :-

Domains

Atu1826-like

Structure

Post Translational Modifications

N_Linked Glycosylation

O_Linked Glycosylation

Phosphorylation

Protein-Protein Interaction

String

Literature

PubMed

Google Scholar

Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India