NF0000250 | methionine aminopeptidase

UniProt_ID:

Computed_GO_Component_IDs:
Computed_GO_Components:
Computed_GO_Function_IDs: GO:0004177 GO:0008235
Computed_GO_Functions: aminopeptidase activity metalloexopeptidase activity
Computed_GO_Process_IDs: GO:0006508
Computed_GO_Processes: proteolysis
Curated_GO_Component_IDs:
Curated_GO_Components:
Curated_GO_Function_IDs:
Curated_GO_Functions:
Curated_GO_Processes:

	_ID	Prediction	OTHER	SP	mTP	CS_Position
	NF0000250	OTHER	0.999962	0.000001	0.000037

No Results

Fasta :-
>NF0000250 MTKKSSAATSTTGNKPAKASKQGNNKKDDDLSFLLEMQKKNEKEMAEQKSQGTAGEKKKK QTPKEYPSEQTQPEPTVPIKYLFKDNNFPQGEIQPLQFYEHRTKRFSARELDAGAEARDE KLQERIRDARHAAEVHRTARKWFKEHVVRPGMRVIDAAEAYENKVRELIEADKNNRKGGL AFPLGCSMNYVAAHYTPNTGDETVIGKDDVIKFDLGTHVNGTIIDSAFTLCWNDQYKPLL EAVKDATNTGCKVAGIDVRLGDVGAAIQEVMESYEVTIDGKTYQVRSISNLCGHSVERYR VHAGKTVPIVACEENEKMEENEFFAIETFGSTGRGSIEEEGVTSHYGKNHDYKGDGSELR NKESRELLKVINENFGSLPFCRRYLDRIGQKKYLTALRDLVNNGIVNEYPPLADVRGCYT AQFEHTILLRPTCKEVLSRGSDY
Download Fasta

MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NF0000250.fa Sequence name : NF0000250 Sequence length : 443 VALUES OF COMPUTED PARAMETERS Coef20 : 4.138 CoefTot : -1.089 ChDiff : -1 ZoneTo : 27 KR : 7 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.000 0.982 0.028 0.456 MesoH : -0.789 0.143 -0.439 0.182 MuHd_075 : 24.824 10.569 6.796 4.104 MuHd_095 : 32.084 12.161 9.490 5.324 MuHd_100 : 31.142 13.175 10.089 5.761 MuHd_105 : 33.268 12.901 10.853 5.869 Hmax_075 : 9.275 0.875 -0.130 1.461 Hmax_095 : 9.100 -5.900 -2.297 1.925 Hmax_100 : 6.400 -0.600 -0.149 1.420 Hmax_105 : 7.000 -2.333 -0.035 1.867 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.2781 0.7219 DFMC : 0.1101 0.8899 This protein is probably imported in chloroplast. f(Ser) = 0.1481 f(Arg) = 0.0000 CMi = 2.11640 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)

##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 443 NF0000250 MTKKSSAATSTTGNKPAKASKQGNNKKDDDLSFLLEMQKKNEKEMAEQKSQGTAGEKKKKQTPKEYPSEQTQPEPTVPIK 80 YLFKDNNFPQGEIQPLQFYEHRTKRFSARELDAGAEARDEKLQERIRDARHAAEVHRTARKWFKEHVVRPGMRVIDAAEA 160 YENKVRELIEADKNNRKGGLAFPLGCSMNYVAAHYTPNTGDETVIGKDDVIKFDLGTHVNGTIIDSAFTLCWNDQYKPLL 240 EAVKDATNTGCKVAGIDVRLGDVGAAIQEVMESYEVTIDGKTYQVRSISNLCGHSVERYRVHAGKTVPIVACEENEKMEE 320 NEFFAIETFGSTGRGSIEEEGVTSHYGKNHDYKGDGSELRNKESRELLKVINENFGSLPFCRRYLDRIGQKKYLTALRDL 400 VNNGIVNEYPPLADVRGCYTAQFEHTILLRPTCKEVLSRGSDY 480 ................................................................................ 80 ........................P....................................................... 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ........................................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ NF0000250 3 ----MTK|KS 0.072 . NF0000250 4 ---MTKK|SS 0.141 . NF0000250 15 TSTTGNK|PA 0.067 . NF0000250 18 TGNKPAK|AS 0.094 . NF0000250 21 KPAKASK|QG 0.067 . NF0000250 26 SKQGNNK|KD 0.063 . NF0000250 27 KQGNNKK|DD 0.137 . NF0000250 39 FLLEMQK|KN 0.061 . NF0000250 40 LLEMQKK|NE 0.090 . NF0000250 43 MQKKNEK|EM 0.062 . NF0000250 49 KEMAEQK|SQ 0.099 . NF0000250 57 QGTAGEK|KK 0.055 . NF0000250 58 GTAGEKK|KK 0.085 . NF0000250 59 TAGEKKK|KQ 0.133 . NF0000250 60 AGEKKKK|QT 0.141 . NF0000250 64 KKKQTPK|EY 0.082 . NF0000250 80 EPTVPIK|YL 0.073 . NF0000250 84 PIKYLFK|DN 0.064 . NF0000250 102 LQFYEHR|TK 0.079 . NF0000250 104 FYEHRTK|RF 0.063 . NF0000250 105 YEHRTKR|FS 0.715 *ProP* NF0000250 109 TKRFSAR|EL 0.245 . NF0000250 118 DAGAEAR|DE 0.123 . NF0000250 121 AEARDEK|LQ 0.128 . NF0000250 125 DEKLQER|IR 0.078 . NF0000250 127 KLQERIR|DA 0.126 . NF0000250 130 ERIRDAR|HA 0.449 . NF0000250 137 HAAEVHR|TA 0.139 . NF0000250 140 EVHRTAR|KW 0.393 . NF0000250 141 VHRTARK|WF 0.079 . NF0000250 144 TARKWFK|EH 0.068 . NF0000250 149 FKEHVVR|PG 0.099 . NF0000250 153 VVRPGMR|VI 0.128 . NF0000250 164 AEAYENK|VR 0.061 . NF0000250 166 AYENKVR|EL 0.091 . NF0000250 173 ELIEADK|NN 0.065 . NF0000250 176 EADKNNR|KG 0.079 . NF0000250 177 ADKNNRK|GG 0.072 . NF0000250 207 DETVIGK|DD 0.062 . NF0000250 212 GKDDVIK|FD 0.062 . NF0000250 237 CWNDQYK|PL 0.072 . NF0000250 244 PLLEAVK|DA 0.068 . NF0000250 252 ATNTGCK|VA 0.068 . NF0000250 259 VAGIDVR|LG 0.080 . NF0000250 281 EVTIDGK|TY 0.053 . NF0000250 286 GKTYQVR|SI 0.172 . NF0000250 298 CGHSVER|YR 0.100 . NF0000250 300 HSVERYR|VH 0.076 . NF0000250 305 YRVHAGK|TV 0.089 . NF0000250 317 ACEENEK|ME 0.062 . NF0000250 334 TFGSTGR|GS 0.112 . NF0000250 348 VTSHYGK|NH 0.091 . NF0000250 353 GKNHDYK|GD 0.108 . NF0000250 360 GDGSELR|NK 0.085 . NF0000250 362 GSELRNK|ES 0.062 . NF0000250 365 LRNKESR|EL 0.132 . NF0000250 369 ESRELLK|VI 0.069 . NF0000250 382 GSLPFCR|RY 0.095 . NF0000250 383 SLPFCRR|YL 0.177 . NF0000250 387 CRRYLDR|IG 0.109 . NF0000250 391 LDRIGQK|KY 0.066 . NF0000250 392 DRIGQKK|YL 0.145 . NF0000250 398 KYLTALR|DL 0.079 . NF0000250 416 PPLADVR|GC 0.102 . NF0000250 430 EHTILLR|PT 0.082 . NF0000250 434 LLRPTCK|EV 0.071 . NF0000250 439 CKEVLSR|GS 0.106 . ____________________________^_________________

Fasta :-
>NF0000250 ATGACCAAAAAGTCCTCCGCAGCAACATCCACGACGGGAAACAAACCAGCAAAGGCTTCC AAGCAAGGCAACAACAAAAAGGATGATGATTTATCGTTTTTATTAGAAATGCAAAAGAAG AATGAGAAGGAAATGGCAGAACAAAAATCTCAAGGAACTGCTGGTGAAAAGAAGAAAAAA CAGACTCCGAAAGAGTATCCATCGGAACAAACTCAACCTGAACCTACAGTGCCGATCAAA TACTTGTTTAAAGACAATAATTTTCCACAAGGTGAGATTCAACCGCTACAATTTTATGAG CACCGTACAAAACGGTTTAGTGCAAGAGAGCTTGATGCTGGAGCTGAAGCTCGTGATGAG AAATTGCAAGAACGCATTCGAGACGCAAGACATGCCGCAGAGGTTCACAGAACTGCAAGA AAATGGTTTAAGGAACATGTGGTTCGACCAGGTATGCGTGTGATTGATGCAGCTGAAGCT TACGAAAATAAGGTGAGAGAATTAATTGAAGCGGACAAGAACAATAGAAAGGGTGGACTA GCTTTCCCATTGGGTTGTTCAATGAATTATGTGGCAGCTCACTACACTCCAAATACTGGT GACGAAACAGTAATTGGAAAAGATGATGTGATAAAATTTGACTTGGGAACTCATGTGAAT GGTACCATTATTGACTCAGCTTTTACATTGTGTTGGAATGATCAATACAAACCACTCTTG GAGGCCGTGAAGGATGCTACCAATACCGGTTGTAAGGTTGCTGGTATTGATGTGAGATTG GGCGATGTTGGAGCTGCCATTCAAGAAGTTATGGAAAGTTATGAAGTGACCATTGATGGA AAGACCTATCAAGTGAGAAGTATTTCAAATTTGTGTGGACACTCTGTTGAGAGATATCGT GTGCATGCAGGTAAAACTGTTCCTATTGTGGCATGTGAAGAAAATGAAAAAATGGAAGAA AATGAATTCTTTGCAATTGAGACTTTCGGCTCTACTGGTAGAGGATCTATCGAAGAAGAA GGCGTCACATCTCACTACGGCAAAAATCATGATTACAAAGGAGATGGCTCAGAGCTTAGA AATAAGGAATCGAGGGAATTGTTGAAAGTTATCAATGAAAATTTTGGATCGCTTCCATTT TGTCGAAGATATTTAGATCGGATAGGTCAAAAGAAATATCTCACGGCTCTTCGTGATTTG GTCAACAATGGAATTGTGAATGAGTATCCACCTTTAGCAGACGTGAGAGGATGTTACACT GCACAATTTGAGCACACCATCTTGTTGAGACCAACATGTAAAGAGGTTCTCAGTCGAGGA TCTGACTATTAA
Download Fasta

Fasta :-

MTKKSSAATSTTGNKPAKASKQGNNKKDDDLSFLLEMQKKNEKEMAEQKSQGTAGEKKKK QTPKEYPSEQTQPEPTVPIKYLFKDNNFPQGEIQPLQFYEHRTKRFSARELDAGAEARDE KLQERIRDARHAAEVHRTARKWFKEHVVRPGMRVIDAAEAYENKVRELIEADKNNRKGGL AFPLGCSMNYVAAHYTPNTGDETVIGKDDVIKFDLGTHVNGTIIDSAFTLCWNDQYKPLL EAVKDATNTGCKVAGIDVRLGDVGAAIQEVMESYEVTIDGKTYQVRSISNLCGHSVERYR VHAGKTVPIVACEENEKMEENEFFAIETFGSTGRGSIEEEGVTSHYGKNHDYKGDGSELR NKESRELLKVINENFGSLPFCRRYLDRIGQKKYLTALRDLVNNGIVNEYPPLADVRGCYT AQFEHTILLRPTCKEVLSRGSDY

No Results

title: active site
coordinates: H194,D214,D225,H294,E327,E424

	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore
	NF0000250	T	2	0.644	0.281	NF0000250	T	62	0.560	0.038	NF0000250	S	5	0.532	0.024	NF0000250	T	9	0.525	0.109	NF0000250	S	6	0.503	0.031

	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore
	NF0000250	T	2	0.644	0.281	NF0000250	T	62	0.560	0.038	NF0000250	S	5	0.532	0.024	NF0000250	T	9	0.525	0.109	NF0000250	S	6	0.503	0.031

	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method
	NF0000250	336 S	TGRGSIEEE	0.998	unsp	NF0000250	336 S	TGRGSIEEE	0.998	unsp	NF0000250	336 S	TGRGSIEEE	0.998	unsp	NF0000250	62 T	KKKQTPKEY	0.991	unsp	NF0000250	107 S	TKRFSAREL	0.998	unsp

NF0000250 | methionine aminopeptidase

ID's

UniProt_ID:

GEO Functions

Computed_GO_Component_IDs:

Computed_GO_Components:

Computed_GO_Function_IDs: GO:0004177 GO:0008235

Computed_GO_Functions: aminopeptidase activity metalloexopeptidase activity

Computed_GO_Process_IDs: GO:0006508

Computed_GO_Processes: proteolysis

Curated_GO_Component_IDs:

Curated_GO_Components:

Curated_GO_Function_IDs:

Curated_GO_Functions:

Curated_GO_Processes:

Subcellular Localization

Targetp

Signalp

Fasta :-

Mitoprot

ProPeptide Prediction

Sequence

Nucleotide sequence

Fasta :-

Protein sequence

Fasta :-

Domains

Structure

Post Translational Modifications

N_Linked Glycosylation

O_Linked Glycosylation

Phosphorylation

Protein-Protein Interaction

String

Literature

PubMed

Google Scholar

Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India