NF0003240 | peptidase c26 family protein

UniProt_ID:

Computed_GO_Component_IDs:
Computed_GO_Components:
Computed_GO_Function_IDs: GO:0016787 GO:0008242
Computed_GO_Functions: hydrolase activity omega peptidase activity
Computed_GO_Process_IDs:
Computed_GO_Processes:
Curated_GO_Component_IDs:
Curated_GO_Components:
Curated_GO_Function_IDs:
Curated_GO_Functions:
Curated_GO_Processes:

	_ID	Prediction	OTHER	SP	mTP	CS_Position
	NF0003240	OTHER	0.833316	0.097984	0.068700

No Results

Fasta :-
>NF0003240 MSPCLLRSVVVVVAHRSPGRNHQSGWSVLHSVMSLLFFTSLLLTLFVAATIPNNNNIFVI GHPVMIRGRVGEGREERIKQEHEFYSSSSSSTRRLTRTATTTTITALNNRPIIGILAQPT SNKEHGESYIAASYVKWIEGSGARVVPIPYDLPQETLQYLFQSLNGLLFPGGGTNIKHSK YADVLKFFFDKVIEANARGDYFPLWGTCLGFESLNILAAENNEVVNYGFDSEDLSLSLKF VSDFRNSRLFGSAPNEILEILAQQNVTMNNHMAGVTPFDYERNEKLRKFFKILSLNADRK GKTFVSTIESFNFPIYGTQYHPEKVYEFNYEVIDHSFDSLIANEYFGQFFVNEARKSQRK FPSFEEEEKYLIYNFSPKFTFPRISKDFMQIYYFNATSTI
Download Fasta

MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NF0003240.fa Sequence name : NF0003240 Sequence length : 400 VALUES OF COMPUTED PARAMETERS Coef20 : 4.580 CoefTot : -0.951 ChDiff : 0 ZoneTo : 71 KR : 5 DE : 0 CleavSite : 69 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.453 2.388 0.405 0.801 MesoH : 0.000 0.619 -0.257 0.280 MuHd_075 : 35.473 21.214 10.067 7.406 MuHd_095 : 25.082 18.830 7.490 6.882 MuHd_100 : 29.357 20.780 7.834 8.311 MuHd_105 : 25.924 20.734 7.710 7.801 Hmax_075 : 10.733 25.400 3.436 3.558 Hmax_095 : 7.700 20.300 3.411 2.460 Hmax_100 : 8.500 15.900 -0.333 3.850 Hmax_105 : 9.700 16.200 -0.484 5.580 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.5328 0.4672 DFMC : 0.1207 0.8793 This protein is probably imported in mitochondria. f(Ser) = 0.1127 f(Arg) = 0.0704 CMi = 0.66834 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)

##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 400 NF0003240 MSPCLLRSVVVVVAHRSPGRNHQSGWSVLHSVMSLLFFTSLLLTLFVAATIPNNNNIFVIGHPVMIRGRVGEGREERIKQ 80 EHEFYSSSSSSTRRLTRTATTTTITALNNRPIIGILAQPTSNKEHGESYIAASYVKWIEGSGARVVPIPYDLPQETLQYL 160 FQSLNGLLFPGGGTNIKHSKYADVLKFFFDKVIEANARGDYFPLWGTCLGFESLNILAAENNEVVNYGFDSEDLSLSLKF 240 VSDFRNSRLFGSAPNEILEILAQQNVTMNNHMAGVTPFDYERNEKLRKFFKILSLNADRKGKTFVSTIESFNFPIYGTQY 320 HPEKVYEFNYEVIDHSFDSLIANEYFGQFFVNEARKSQRKFPSFEEEEKYLIYNFSPKFTFPRISKDFMQIYYFNATSTI 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NF0003240 7 MSPCLLR|SV 0.168 . NF0003240 16 VVVVAHR|SP 0.110 . NF0003240 20 AHRSPGR|NH 0.083 . NF0003240 67 GHPVMIR|GR 0.084 . NF0003240 69 PVMIRGR|VG 0.082 . NF0003240 74 GRVGEGR|EE 0.114 . NF0003240 77 GEGREER|IK 0.275 . NF0003240 79 GREERIK|QE 0.064 . NF0003240 93 SSSSSTR|RL 0.113 . NF0003240 94 SSSSTRR|LT 0.243 . NF0003240 97 STRRLTR|TA 0.331 . NF0003240 110 ITALNNR|PI 0.114 . NF0003240 123 AQPTSNK|EH 0.064 . NF0003240 136 IAASYVK|WI 0.078 . NF0003240 144 IEGSGAR|VV 0.084 . NF0003240 177 GGGTNIK|HS 0.059 . NF0003240 180 TNIKHSK|YA 0.094 . NF0003240 186 KYADVLK|FF 0.078 . NF0003240 191 LKFFFDK|VI 0.072 . NF0003240 198 VIEANAR|GD 0.083 . NF0003240 239 DLSLSLK|FV 0.103 . NF0003240 245 KFVSDFR|NS 0.070 . NF0003240 248 SDFRNSR|LF 0.227 . NF0003240 282 TPFDYER|NE 0.065 . NF0003240 285 DYERNEK|LR 0.070 . NF0003240 287 ERNEKLR|KF 0.139 . NF0003240 288 RNEKLRK|FF 0.075 . NF0003240 291 KLRKFFK|IL 0.071 . NF0003240 299 LSLNADR|KG 0.071 . NF0003240 300 SLNADRK|GK 0.091 . NF0003240 302 NADRKGK|TF 0.116 . NF0003240 324 TQYHPEK|VY 0.066 . NF0003240 355 FFVNEAR|KS 0.088 . NF0003240 356 FVNEARK|SQ 0.104 . NF0003240 359 EARKSQR|KF 0.098 . NF0003240 360 ARKSQRK|FP 0.117 . NF0003240 369 SFEEEEK|YL 0.061 . NF0003240 378 IYNFSPK|FT 0.079 . NF0003240 383 PKFTFPR|IS 0.095 . NF0003240 386 TFPRISK|DF 0.165 . ____________________________^_________________

Fasta :-
>NF0003240 ATGTCTCCGTGTCTTCTCCGATCAGTAGTCGTTGTGGTAGCACATCGATCACCTGGTCGG AACCACCAATCTGGTTGGTCTGTTCTTCACAGTGTGATGTCTTTGTTATTCTTCACATCA TTATTATTAACATTGTTTGTAGCAGCAACTATTCCAAACAACAACAATATCTTTGTGATT GGTCATCCAGTGATGATACGAGGTCGAGTTGGAGAAGGCAGAGAAGAAAGAATCAAACAA GAACACGAATTTTATTCATCATCATCATCGTCCACAAGAAGATTAACAAGAACAGCAACC ACCACTACTATCACCGCACTTAATAATCGTCCCATCATTGGAATTTTGGCACAACCAACC AGTAACAAGGAACATGGTGAGAGTTATATTGCTGCGTCGTATGTGAAATGGATTGAAGGC AGTGGTGCACGAGTGGTGCCAATTCCCTATGATTTACCACAAGAAACTTTACAGTATTTG TTTCAATCATTGAATGGATTGTTATTTCCAGGAGGAGGTACCAATATCAAGCACTCCAAG TATGCTGACGTGTTAAAATTCTTTTTCGACAAGGTTATTGAAGCCAACGCTCGAGGAGAT TATTTTCCATTATGGGGTACATGCTTGGGATTTGAATCGTTGAATATTTTGGCAGCAGAA AACAATGAAGTGGTGAATTATGGATTTGATTCTGAGGATCTGAGCTTGTCTTTGAAATTT GTGAGTGATTTTAGAAATTCAAGATTATTTGGAAGTGCACCTAACGAAATATTAGAAATA CTTGCACAACAAAACGTGACCATGAACAACCATATGGCTGGCGTCACACCCTTTGATTAT GAAAGAAATGAGAAATTACGAAAATTTTTCAAAATTTTATCCCTCAATGCTGATCGAAAA GGGAAAACATTTGTTTCAACGATTGAGAGCTTTAATTTTCCAATTTATGGAACCCAATAT CATCCTGAAAAAGTTTATGAATTTAACTATGAGGTGATTGACCACTCCTTTGACAGCTTG ATCGCCAATGAATACTTTGGACAATTTTTTGTAAATGAAGCAAGAAAGAGCCAACGAAAG TTCCCTTCTTTCGAGGAAGAAGAAAAATATTTAATTTATAACTTTAGTCCAAAATTTACC TTCCCTCGTATTAGCAAAGACTTTATGCAAATTTATTACTTCAATGCAACATCTACCATA TGA
Download Fasta

Fasta :-

MSPCLLRSVVVVVAHRSPGRNHQSGWSVLHSVMSLLFFTSLLLTLFVAATIPNNNNIFVI GHPVMIRGRVGEGREERIKQEHEFYSSSSSSTRRLTRTATTTTITALNNRPIIGILAQPT SNKEHGESYIAASYVKWIEGSGARVVPIPYDLPQETLQYLFQSLNGLLFPGGGTNIKHSK YADVLKFFFDKVIEANARGDYFPLWGTCLGFESLNILAAENNEVVNYGFDSEDLSLSLKF VSDFRNSRLFGSAPNEILEILAQQNVTMNNHMAGVTPFDYERNEKLRKFFKILSLNADRK GKTFVSTIESFNFPIYGTQYHPEKVYEFNYEVIDHSFDSLIANEYFGQFFVNEARKSQRK FPSFEEEEKYLIYNFSPKFTFPRISKDFMQIYYFNATSTI

Class I glutamine amidotransferases (GAT)

title: conserved cys residue
coordinates: C208

	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore
	NF0003240	T	98	0.508	0.038	NF0003240	T	100	0.506	0.041

	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore
	NF0003240	T	98	0.508	0.038	NF0003240	T	100	0.506	0.041

	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method
	NF0003240	357 S	EARKSQRKF	0.994	unsp	NF0003240	357 S	EARKSQRKF	0.994	unsp	NF0003240	357 S	EARKSQRKF	0.994	unsp	NF0003240	363 S	RKFPSFEEE	0.991	unsp	NF0003240	91 S	SSSSSTRRL	0.996	unsp	NF0003240	179 S	NIKHSKYAD	0.992	unsp

NF0003240 | peptidase c26 family protein

ID's

UniProt_ID:

GEO Functions

Computed_GO_Component_IDs:

Computed_GO_Components:

Computed_GO_Function_IDs: GO:0016787 GO:0008242

Computed_GO_Functions: hydrolase activity omega peptidase activity

Computed_GO_Process_IDs:

Computed_GO_Processes:

Curated_GO_Component_IDs:

Curated_GO_Components:

Curated_GO_Function_IDs:

Curated_GO_Functions:

Curated_GO_Processes:

Subcellular Localization

Targetp

Signalp

Fasta :-

Mitoprot

ProPeptide Prediction

Sequence

Nucleotide sequence

Fasta :-

Protein sequence

Fasta :-

Domains

Class I glutamine amidotransferases (GAT)

Structure

Post Translational Modifications

N_Linked Glycosylation

O_Linked Glycosylation

Phosphorylation

Protein-Protein Interaction

String

Literature

PubMed

Google Scholar

Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India