• Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0016787      

  • Computed_GO_Functions:  hydrolase activity      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
NF0004670OTHER0.9982140.0001900.001596
No Results
  • Fasta :-

    >NF0004670 MTSSLVSANKVHKLRELMQKYSIHGYIIPSGDAHLSEYISDADKRREFISGFDGSAGTAV VTLEEASLFTDGRYWLQAQKQLDPAIWKLMKLGIDPPLSKYITSFADLKRTTTFGVDPFL FSVNEFLELRKAASESEKGQVEIKPILENLVDEIWGDEKPKPPNGIIYKLDEKYTGRSVA DKLKFVRAKMQDLGGECYILTALDEIAWILNLRGSDIDYNTVFISYMIVTLQDAYLYVDE SKFESPNIKNELSDNNIHVKPYSQYMEDLKTITEKVQHDKSCLIDPRTCNFATFEAIRCK VNKIHSIITAEKAIKNAVEREGFKSCHIRDGAAIVKYLAWLENELKNGRKVNEYDGALAL EAFRKENTDYLRLSFSTISAYGKSASVVHYSPPETNSEEISTDNLYLLDSGAHYKDGTTD TTRTVHFGTPTDYQKRCFTRVLQGHIALDRLVFPEGTSGYRLDSIARAPLWKDGLDYNHG TGHGVGHALCVHEGPHGIGYRSLILNEFGMKENCIVTNEPGYYEPGNFGIRIENILLTKR VNTMTNFNDKAYIGFESVTRCPIQPTLVDTNLLARDEIEWINNYNALVREALTPLLQNNE LALKYLLKNTEPISV
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NF0004670.fa Sequence name : NF0004670 Sequence length : 615 VALUES OF COMPUTED PARAMETERS Coef20 : 4.243 CoefTot : -1.204 ChDiff : -13 ZoneTo : 31 KR : 4 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.865 1.371 0.041 0.562 MesoH : -0.731 0.196 -0.448 0.181 MuHd_075 : 38.765 29.079 11.416 8.601 MuHd_095 : 26.067 17.306 9.738 4.353 MuHd_100 : 30.007 17.647 10.425 5.370 MuHd_105 : 32.232 21.222 10.426 6.263 Hmax_075 : 18.783 21.467 4.145 6.720 Hmax_095 : 9.200 5.600 -1.861 1.890 Hmax_100 : 3.100 8.100 -0.961 5.100 Hmax_105 : 14.933 16.300 2.176 5.960 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7373 0.2627 DFMC : 0.7963 0.2037
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 615 NF0004670 MTSSLVSANKVHKLRELMQKYSIHGYIIPSGDAHLSEYISDADKRREFISGFDGSAGTAVVTLEEASLFTDGRYWLQAQK 80 QLDPAIWKLMKLGIDPPLSKYITSFADLKRTTTFGVDPFLFSVNEFLELRKAASESEKGQVEIKPILENLVDEIWGDEKP 160 KPPNGIIYKLDEKYTGRSVADKLKFVRAKMQDLGGECYILTALDEIAWILNLRGSDIDYNTVFISYMIVTLQDAYLYVDE 240 SKFESPNIKNELSDNNIHVKPYSQYMEDLKTITEKVQHDKSCLIDPRTCNFATFEAIRCKVNKIHSIITAEKAIKNAVER 320 EGFKSCHIRDGAAIVKYLAWLENELKNGRKVNEYDGALALEAFRKENTDYLRLSFSTISAYGKSASVVHYSPPETNSEEI 400 STDNLYLLDSGAHYKDGTTDTTRTVHFGTPTDYQKRCFTRVLQGHIALDRLVFPEGTSGYRLDSIARAPLWKDGLDYNHG 480 TGHGVGHALCVHEGPHGIGYRSLILNEFGMKENCIVTNEPGYYEPGNFGIRIENILLTKRVNTMTNFNDKAYIGFESVTR 560 CPIQPTLVDTNLLARDEIEWINNYNALVREALTPLLQNNELALKYLLKNTEPISV 640 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ....................................................... 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NF0004670 10 SLVSANK|VH 0.057 . NF0004670 13 SANKVHK|LR 0.068 . NF0004670 15 NKVHKLR|EL 0.124 . NF0004670 20 LRELMQK|YS 0.081 . NF0004670 44 YISDADK|RR 0.057 . NF0004670 45 ISDADKR|RE 0.170 . NF0004670 46 SDADKRR|EF 0.228 . NF0004670 73 SLFTDGR|YW 0.134 . NF0004670 80 YWLQAQK|QL 0.064 . NF0004670 88 LDPAIWK|LM 0.056 . NF0004670 91 AIWKLMK|LG 0.058 . NF0004670 100 IDPPLSK|YI 0.060 . NF0004670 109 TSFADLK|RT 0.063 . NF0004670 110 SFADLKR|TT 0.193 . NF0004670 130 NEFLELR|KA 0.070 . NF0004670 131 EFLELRK|AA 0.097 . NF0004670 138 AASESEK|GQ 0.074 . NF0004670 144 KGQVEIK|PI 0.068 . NF0004670 159 EIWGDEK|PK 0.057 . NF0004670 161 WGDEKPK|PP 0.067 . NF0004670 169 PNGIIYK|LD 0.065 . NF0004670 173 IYKLDEK|YT 0.067 . NF0004670 177 DEKYTGR|SV 0.202 . NF0004670 182 GRSVADK|LK 0.078 . NF0004670 184 SVADKLK|FV 0.107 . NF0004670 187 DKLKFVR|AK 0.100 . NF0004670 189 LKFVRAK|MQ 0.083 . NF0004670 213 AWILNLR|GS 0.089 . NF0004670 242 LYVDESK|FE 0.072 . NF0004670 249 FESPNIK|NE 0.058 . NF0004670 260 DNNIHVK|PY 0.091 . NF0004670 270 QYMEDLK|TI 0.062 . NF0004670 275 LKTITEK|VQ 0.062 . NF0004670 280 EKVQHDK|SC 0.080 . NF0004670 287 SCLIDPR|TC 0.077 . NF0004670 298 ATFEAIR|CK 0.083 . NF0004670 300 FEAIRCK|VN 0.058 . NF0004670 303 IRCKVNK|IH 0.086 . NF0004670 312 SIITAEK|AI 0.068 . NF0004670 315 TAEKAIK|NA 0.067 . NF0004670 320 IKNAVER|EG 0.108 . NF0004670 324 VEREGFK|SC 0.071 . NF0004670 329 FKSCHIR|DG 0.175 . NF0004670 336 DGAAIVK|YL 0.069 . NF0004670 346 WLENELK|NG 0.057 . NF0004670 349 NELKNGR|KV 0.091 . NF0004670 350 ELKNGRK|VN 0.074 . NF0004670 364 LALEAFR|KE 0.063 . NF0004670 365 ALEAFRK|EN 0.098 . NF0004670 372 ENTDYLR|LS 0.071 . NF0004670 383 TISAYGK|SA 0.136 . NF0004670 415 DSGAHYK|DG 0.072 . NF0004670 423 GTTDTTR|TV 0.124 . NF0004670 435 TPTDYQK|RC 0.061 . NF0004670 436 PTDYQKR|CF 0.183 . NF0004670 440 QKRCFTR|VL 0.107 . NF0004670 450 GHIALDR|LV 0.125 . NF0004670 461 EGTSGYR|LD 0.071 . NF0004670 467 RLDSIAR|AP 0.070 . NF0004670 472 ARAPLWK|DG 0.083 . NF0004670 501 PHGIGYR|SL 0.149 . NF0004670 511 LNEFGMK|EN 0.062 . NF0004670 531 PGNFGIR|IE 0.074 . NF0004670 539 ENILLTK|RV 0.066 . NF0004670 540 NILLTKR|VN 0.094 . NF0004670 550 MTNFNDK|AY 0.074 . NF0004670 560 GFESVTR|CP 0.070 . NF0004670 575 DTNLLAR|DE 0.094 . NF0004670 589 NYNALVR|EA 0.089 . NF0004670 604 NNELALK|YL 0.057 . NF0004670 608 ALKYLLK|NT 0.069 . ____________________________^_________________
  • Fasta :-

    >NF0004670 ATGACTTCATCCTTGGTATCGGCAAACAAAGTTCATAAATTGCGAGAATTGATGCAAAAG TACTCCATTCATGGTTACATCATCCCATCGGGTGATGCTCATTTGAGTGAGTACATTTCC GATGCTGATAAGAGAAGAGAATTCATCTCGGGTTTTGATGGATCAGCTGGTACTGCAGTT GTTACTTTGGAAGAGGCGTCTCTCTTTACGGACGGAAGATACTGGCTACAAGCACAGAAA CAGTTGGATCCTGCCATTTGGAAACTGATGAAGCTTGGTATTGATCCTCCATTGAGCAAG TATATTACATCCTTTGCTGATCTCAAGAGAACCACTACATTCGGAGTAGATCCTTTTCTA TTTTCTGTCAATGAATTTTTGGAGCTAAGGAAAGCTGCATCAGAAAGTGAAAAGGGACAA GTAGAAATTAAGCCAATTCTTGAAAATTTGGTAGATGAAATTTGGGGAGACGAGAAGCCT AAACCACCCAATGGTATTATTTACAAATTGGATGAAAAGTACACTGGAAGATCTGTTGCT GACAAGCTCAAATTTGTGAGAGCAAAGATGCAAGACCTTGGTGGAGAATGCTACATTTTG ACTGCTTTGGATGAAATTGCATGGATTCTCAATTTGAGAGGATCTGACATTGATTACAAT ACTGTATTCATCAGCTACATGATTGTCACTTTGCAGGATGCTTATCTCTATGTGGATGAA AGCAAGTTTGAATCTCCAAATATCAAAAACGAACTTTCTGACAACAATATTCACGTTAAG CCATATTCACAGTATATGGAGGATTTGAAAACCATTACTGAAAAAGTTCAACATGACAAA TCTTGCCTCATCGATCCAAGAACATGCAACTTTGCCACTTTTGAGGCTATTCGTTGCAAA GTTAACAAGATTCATAGTATTATCACTGCGGAGAAGGCCATTAAGAATGCTGTAGAAAGA GAGGGCTTCAAATCGTGCCACATTCGTGACGGTGCAGCCATTGTTAAATATTTGGCATGG CTCGAAAACGAGTTGAAGAATGGTAGAAAAGTCAACGAATACGATGGAGCATTGGCTTTG GAAGCATTCAGAAAAGAGAATACAGATTATCTTCGATTAAGCTTTTCAACCATTAGTGCC TATGGAAAGAGCGCCTCCGTAGTTCACTACTCACCACCTGAGACCAACAGCGAGGAGATT TCAACTGACAATTTGTACTTATTGGACAGCGGTGCACACTACAAGGATGGAACCACCGAT ACTACCAGAACAGTGCATTTTGGAACTCCAACCGACTATCAAAAGAGATGTTTTACTCGA GTACTACAGGGCCATATCGCTTTGGATAGACTCGTATTCCCTGAGGGCACATCAGGCTAT CGTTTAGATTCCATTGCAAGGGCTCCTTTGTGGAAGGATGGCTTGGATTACAACCACGGA ACTGGTCACGGTGTTGGTCATGCATTGTGTGTTCACGAGGGACCACACGGAATTGGATAT AGATCTTTGATTTTGAACGAGTTCGGTATGAAAGAGAATTGCATTGTAACCAATGAGCCA GGTTATTACGAACCTGGCAATTTTGGTATCAGAATTGAGAACATTCTGTTAACCAAACGA GTGAATACCATGACTAATTTCAATGACAAGGCATATATTGGCTTTGAGTCAGTGACTCGT TGCCCCATTCAACCAACCCTCGTCGACACCAATCTTCTTGCAAGAGACGAAATTGAGTGG ATCAATAATTACAATGCTTTGGTTCGTGAAGCTCTCACTCCACTCTTACAAAACAACGAA CTTGCATTGAAATATTTATTGAAGAATACTGAACCGATCTCTGTTTAG
  • Download Fasta
  • Fasta :-

    MTSSLVSANKVHKLRELMQKYSIHGYIIPSGDAHLSEYISDADKRREFISGFDGSAGTAV VTLEEASLFTDGRYWLQAQKQLDPAIWKLMKLGIDPPLSKYITSFADLKRTTTFGVDPFL FSVNEFLELRKAASESEKGQVEIKPILENLVDEIWGDEKPKPPNGIIYKLDEKYTGRSVA DKLKFVRAKMQDLGGECYILTALDEIAWILNLRGSDIDYNTVFISYMIVTLQDAYLYVDE SKFESPNIKNELSDNNIHVKPYSQYMEDLKTITEKVQHDKSCLIDPRTCNFATFEAIRCK VNKIHSIITAEKAIKNAVEREGFKSCHIRDGAAIVKYLAWLENELKNGRKVNEYDGALAL EAFRKENTDYLRLSFSTISAYGKSASVVHYSPPETNSEEISTDNLYLLDSGAHYKDGTTD TTRTVHFGTPTDYQKRCFTRVLQGHIALDRLVFPEGTSGYRLDSIARAPLWKDGLDYNHG TGHGVGHALCVHEGPHGIGYRSLILNEFGMKENCIVTNEPGYYEPGNFGIRIENILLTKR VNTMTNFNDKAYIGFESVTRCPIQPTLVDTNLLARDEIEWINNYNALVREALTPLLQNNE LALKYLLKNTEPISV

  • title: active site
  • coordinates: H389,D409,D420,H487,E519,E533
No Results
No Results
IDSitePeptideScoreMethod
NF0004670136 SAASESEKGQ0.994unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India