NF0026930 | otu-like cysteine protease family protein

UniProt_ID:

Computed_GO_Component_IDs:
Computed_GO_Components:
Computed_GO_Function_IDs:
Computed_GO_Functions:
Computed_GO_Process_IDs:
Computed_GO_Processes:
Curated_GO_Component_IDs:
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Curated_GO_Processes:

	_ID	Prediction	OTHER	SP	mTP	CS_Position
	NF0026930	OTHER	0.999984	0.000005	0.000010

No Results

Fasta :-
>NF0026930 MTHILLHQWWMNHQERDHSPSTPPLSLHRNDHRIREKPQFRIFHDRLRMLNDLDPNTNHH LQQQTCRLIGPNDSKRMDQRNEESSSSSLDFHPVVGTTSLNHHSQQRNHHDLKNTSTSVP ITIHRSRTQNSFFKSHRPIDDRQEKEIESRPSSSSSSPSSPSSHASMIHHHQDASVRHPR IRFIRVTSPSDNEENKMDFEYTSSPKTHNFHHRNSIPSEEEPPMKKASHLHAVEEGATTH NKATTPSSPQPVKKSHQQQEDSRSSHKNRKKELLSELLARKHLRLIHATANGNCLFNCIS LALAQSEEYHTQIRQKCVDWIENNLDTPVSQDGGIKVRDLIFLKPFQETIEDYLGELRQD KEWADYCCLNALANLLNVQLDVYYVNMLEDGNWDDPSSMVVKSKIKVLPAQFVRGGVSQH RRHHGLKKIRVVYHEELKHYNLLVPQYHTSML
Download Fasta

MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NF0026930.fa Sequence name : NF0026930 Sequence length : 452 VALUES OF COMPUTED PARAMETERS Coef20 : 3.219 CoefTot : -0.917 ChDiff : 4 ZoneTo : 14 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.824 1.088 0.114 0.404 MesoH : -1.440 -0.086 -0.600 0.088 MuHd_075 : 25.356 20.212 8.549 5.984 MuHd_095 : 7.537 5.891 2.512 1.782 MuHd_100 : 1.882 6.676 3.035 0.615 MuHd_105 : 7.283 6.196 2.627 1.613 Hmax_075 : 7.117 8.167 -2.099 4.142 Hmax_095 : 1.575 0.262 -4.325 2.721 Hmax_100 : -4.400 1.600 -4.378 1.410 Hmax_105 : -4.300 -2.333 -5.190 0.300 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9625 0.0375 DFMC : 0.9544 0.0456

##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 452 NF0026930 MTHILLHQWWMNHQERDHSPSTPPLSLHRNDHRIREKPQFRIFHDRLRMLNDLDPNTNHHLQQQTCRLIGPNDSKRMDQR 80 NEESSSSSLDFHPVVGTTSLNHHSQQRNHHDLKNTSTSVPITIHRSRTQNSFFKSHRPIDDRQEKEIESRPSSSSSSPSS 160 PSSHASMIHHHQDASVRHPRIRFIRVTSPSDNEENKMDFEYTSSPKTHNFHHRNSIPSEEEPPMKKASHLHAVEEGATTH 240 NKATTPSSPQPVKKSHQQQEDSRSSHKNRKKELLSELLARKHLRLIHATANGNCLFNCISLALAQSEEYHTQIRQKCVDW 320 IENNLDTPVSQDGGIKVRDLIFLKPFQETIEDYLGELRQDKEWADYCCLNALANLLNVQLDVYYVNMLEDGNWDDPSSMV 400 VKSKIKVLPAQFVRGGVSQHRRHHGLKKIRVVYHEELKHYNLLVPQYHTSML 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 .................................................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NF0026930 16 WMNHQER|DH 0.171 . NF0026930 29 PPLSLHR|ND 0.078 . NF0026930 33 LHRNDHR|IR 0.092 . NF0026930 35 RNDHRIR|EK 0.085 . NF0026930 37 DHRIREK|PQ 0.071 . NF0026930 41 REKPQFR|IF 0.123 . NF0026930 46 FRIFHDR|LR 0.084 . NF0026930 48 IFHDRLR|ML 0.098 . NF0026930 67 LQQQTCR|LI 0.112 . NF0026930 75 IGPNDSK|RM 0.058 . NF0026930 76 GPNDSKR|MD 0.309 . NF0026930 80 SKRMDQR|NE 0.103 . NF0026930 107 NHHSQQR|NH 0.119 . NF0026930 113 RNHHDLK|NT 0.086 . NF0026930 125 VPITIHR|SR 0.108 . NF0026930 127 ITIHRSR|TQ 0.089 . NF0026930 134 TQNSFFK|SH 0.099 . NF0026930 137 SFFKSHR|PI 0.120 . NF0026930 142 HRPIDDR|QE 0.094 . NF0026930 145 IDDRQEK|EI 0.141 . NF0026930 150 EKEIESR|PS 0.081 . NF0026930 177 HQDASVR|HP 0.081 . NF0026930 180 ASVRHPR|IR 0.248 . NF0026930 182 VRHPRIR|FI 0.149 . NF0026930 185 PRIRFIR|VT 0.423 . NF0026930 196 SDNEENK|MD 0.073 . NF0026930 206 EYTSSPK|TH 0.055 . NF0026930 213 THNFHHR|NS 0.191 . NF0026930 225 EEEPPMK|KA 0.073 . NF0026930 226 EEPPMKK|AS 0.079 . NF0026930 242 GATTHNK|AT 0.073 . NF0026930 253 SSPQPVK|KS 0.075 . NF0026930 254 SPQPVKK|SH 0.397 . NF0026930 263 QQQEDSR|SS 0.146 . NF0026930 267 DSRSSHK|NR 0.066 . NF0026930 269 RSSHKNR|KK 0.118 . NF0026930 270 SSHKNRK|KE 0.085 . NF0026930 271 SHKNRKK|EL 0.105 . NF0026930 280 LSELLAR|KH 0.088 . NF0026930 281 SELLARK|HL 0.073 . NF0026930 284 LARKHLR|LI 0.126 . NF0026930 314 EYHTQIR|QK 0.076 . NF0026930 316 HTQIRQK|CV 0.126 . NF0026930 336 SQDGGIK|VR 0.054 . NF0026930 338 DGGIKVR|DL 0.101 . NF0026930 344 RDLIFLK|PF 0.058 . NF0026930 358 DYLGELR|QD 0.061 . NF0026930 361 GELRQDK|EW 0.105 . NF0026930 402 PSSMVVK|SK 0.141 . NF0026930 404 SMVVKSK|IK 0.059 . NF0026930 406 VVKSKIK|VL 0.060 . NF0026930 414 LPAQFVR|GG 0.098 . NF0026930 421 GGVSQHR|RH 0.079 . NF0026930 422 GVSQHRR|HH 0.199 . NF0026930 427 RRHHGLK|KI 0.084 . NF0026930 428 RHHGLKK|IR 0.091 . NF0026930 430 HGLKKIR|VV 0.131 . NF0026930 438 VYHEELK|HY 0.060 . ____________________________^_________________

Fasta :-
>NF0026930 ATGACGCATATACTTCTGCATCAGTGGTGGATGAATCATCAAGAGAGAGATCACTCTCCC TCCACACCTCCATTAAGCTTACATCGGAATGACCATCGGATCAGAGAAAAACCACAGTTT AGAATTTTTCATGATCGACTGCGGATGTTGAATGATTTAGACCCTAATACAAATCATCAT CTTCAGCAGCAAACATGTAGATTGATCGGCCCAAATGATAGTAAAAGAATGGATCAACGG AATGAAGAATCATCCTCCTCATCATTGGATTTTCATCCTGTTGTTGGAACCACAAGTTTG AATCATCATTCTCAACAACGAAATCATCATGACCTCAAGAATACATCCACCTCCGTTCCA ATCACCATCCATCGTTCAAGAACACAAAATTCCTTTTTCAAATCTCATCGCCCTATTGAT GATAGACAAGAAAAGGAAATAGAATCAAGACCATCCTCCTCCTCCTCTTCACCCTCTTCA CCCTCTTCACACGCTTCAATGATTCATCATCATCAAGATGCTTCCGTAAGGCATCCCCGA ATAAGGTTCATTCGAGTTACCTCTCCAAGTGATAATGAGGAAAATAAGATGGATTTTGAA TACACATCATCACCTAAAACTCACAATTTTCATCATCGGAATAGCATTCCTTCGGAAGAA GAGCCACCCATGAAAAAGGCAAGCCACCTTCACGCAGTGGAAGAAGGAGCCACAACACAT AACAAAGCAACAACTCCTTCCTCACCTCAACCTGTCAAAAAATCACACCAACAACAAGAA GATTCAAGATCGTCACACAAGAATCGCAAAAAAGAACTTCTCTCGGAGCTATTGGCTCGA AAACATTTAAGGCTCATTCACGCCACAGCAAATGGAAATTGTTTATTTAATTGTATTTCT TTGGCACTTGCTCAAAGTGAAGAGTATCACACCCAAATAAGGCAAAAATGTGTGGATTGG ATTGAAAATAATTTAGACACGCCAGTGTCACAAGATGGAGGAATCAAAGTACGAGATTTA ATATTTTTAAAACCTTTTCAAGAAACTATTGAGGATTACCTGGGAGAATTGAGACAAGAC AAGGAATGGGCTGATTATTGCTGCCTAAATGCATTGGCTAATTTGCTAAATGTACAATTG GACGTGTATTATGTAAACATGTTGGAGGATGGAAATTGGGATGATCCGTCATCGATGGTG GTAAAATCTAAGATTAAGGTTCTGCCCGCACAATTTGTGAGGGGAGGTGTCTCTCAACAC CGACGACACCACGGTCTCAAAAAGATTCGTGTGGTCTATCATGAAGAATTGAAACATTAC AACCTCCTTGTTCCACAATATCACACCTCTATGTTGTAA
Download Fasta

Fasta :-

MTHILLHQWWMNHQERDHSPSTPPLSLHRNDHRIREKPQFRIFHDRLRMLNDLDPNTNHH LQQQTCRLIGPNDSKRMDQRNEESSSSSLDFHPVVGTTSLNHHSQQRNHHDLKNTSTSVP ITIHRSRTQNSFFKSHRPIDDRQEKEIESRPSSSSSSPSSPSSHASMIHHHQDASVRHPR IRFIRVTSPSDNEENKMDFEYTSSPKTHNFHHRNSIPSEEEPPMKKASHLHAVEEGATTH NKATTPSSPQPVKKSHQQQEDSRSSHKNRKKELLSELLARKHLRLIHATANGNCLFNCIS LALAQSEEYHTQIRQKCVDWIENNLDTPVSQDGGIKVRDLIFLKPFQETIEDYLGELRQD KEWADYCCLNALANLLNVQLDVYYVNMLEDGNWDDPSSMVVKSKIKVLPAQFVRGGVSQH RRHHGLKKIRVVYHEELKHYNLLVPQYHTSML

Ubiquitin thiolesterase protein OTUB2 (Otubain-2)

No Results

	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore
	NF0026930	S	153	0.589	0.027	NF0026930	S	152	0.588	0.215	NF0026930	S	149	0.558	0.059	NF0026930	S	154	0.550	0.161	NF0026930	T	238	0.539	0.141	NF0026930	T	245	0.532	0.275	NF0026930	S	155	0.530	0.142	NF0026930	S	162	0.530	0.135	NF0026930	S	160	0.525	0.039	NF0026930	S	163	0.523	0.029	NF0026930	S	156	0.521	0.028	NF0026930	S	157	0.514	0.062	NF0026930	S	166	0.514	0.021	NF0026930	T	244	0.514	0.033	NF0026930	S	159	0.500	0.133

	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore
	NF0026930	S	153	0.589	0.027	NF0026930	S	152	0.588	0.215	NF0026930	S	149	0.558	0.059	NF0026930	S	154	0.550	0.161	NF0026930	T	238	0.539	0.141	NF0026930	T	245	0.532	0.275	NF0026930	S	155	0.530	0.142	NF0026930	S	162	0.530	0.135	NF0026930	S	160	0.525	0.039	NF0026930	S	163	0.523	0.029	NF0026930	S	156	0.521	0.028	NF0026930	S	157	0.514	0.062	NF0026930	S	166	0.514	0.021	NF0026930	T	244	0.514	0.033	NF0026930	S	159	0.500	0.133

	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method
	NF0026930	153 S	SRPSSSSSS	0.996	unsp	NF0026930	153 S	SRPSSSSSS	0.996	unsp	NF0026930	153 S	SRPSSSSSS	0.996	unsp	NF0026930	157 S	SSSSSPSSP	0.996	unsp	NF0026930	160 S	SSPSSPSSH	0.997	unsp	NF0026930	188 S	IRVTSPSDN	0.998	unsp	NF0026930	218 S	NSIPSEEEP	0.997	unsp	NF0026930	265 S	DSRSSHKNR	0.998	unsp	NF0026930	19 S	ERDHSPSTP	0.996	unsp	NF0026930	152 S	ESRPSSSSS	0.997	unsp

NF0026930 | otu-like cysteine protease family protein

ID's

UniProt_ID:

GEO Functions

Computed_GO_Component_IDs:

Computed_GO_Components:

Computed_GO_Function_IDs:

Computed_GO_Functions:

Computed_GO_Process_IDs:

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Curated_GO_Component_IDs:

Curated_GO_Components:

Curated_GO_Function_IDs:

Curated_GO_Functions:

Curated_GO_Processes:

Subcellular Localization

Targetp

Signalp

Fasta :-

Mitoprot

ProPeptide Prediction

Sequence

Nucleotide sequence

Fasta :-

Protein sequence

Fasta :-

Domains

Ubiquitin thiolesterase protein OTUB2 (Otubain-2)

Structure

Post Translational Modifications

N_Linked Glycosylation

O_Linked Glycosylation

Phosphorylation

Protein-Protein Interaction

String

Literature

PubMed

Google Scholar

Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India