NF0028030 | predicted protein

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_IDPredictionOTHERSPmTPCS_Position
NF0028030SP0.0233750.9765870.000037CS pos: 25-26. TLA-AT. Pr: 0.8274
No Results

  • Fasta :-

    >NF0028030 MKKKSICFFVLILWLLVAIITSTLAATQTKSQDTFIDAFRLIQYDKGSQPFGCRVTGLNS PITTQRLGGSSALSAARNVIMMKIEELLSSNKTSVQSILNREDVSGLLIVLPPKDDEISP NSIDQSRNIEKQFLVSTFDKPIYFIFQNEKTSEMLSYFENLSEFSLLSESYQAVVSEGEA KPIDQIPVVNIFSTLQGKQTEKSQTIGIVAHYDSVSSIPGLATTFNADGSGMIGLLEVSR LFQKLYSIPSTKASHNLLFILTGGSRLGFAGTKHWIKQTGPRLVNQLDFVLCLDSLTSRV NSRDDESFKLFMHISEKTNDKNVINLYKHFVSTAKQLQIGLQFIEKKIDRELVWEHEVFA KKGIVSATISAQSVPSSSMLTRTNSLDISKVDIDQLRKSIKLVSEALARHLYDIDHNIRF FEDENDKFIRAFIKNVENTSRFTPTLSKESDLVKTLKLTLQQFTSNDQTVQTQDFLLSNS AYKFYTNIKVKLSLLKVTPITFDLILISSVIIYLLFLHIVLVGPKQVLFNIASLFEKQER KRK
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NF0028030.fa Sequence name : NF0028030 Sequence length : 543 VALUES OF COMPUTED PARAMETERS Coef20 : 4.888 CoefTot : 0.607 ChDiff : 8 ZoneTo : 32 KR : 4 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.559 2.888 0.569 0.946 MesoH : 0.183 0.914 -0.188 0.376 MuHd_075 : 16.473 15.187 7.562 3.855 MuHd_095 : 14.351 13.776 3.507 3.755 MuHd_100 : 17.376 13.771 5.032 4.520 MuHd_105 : 15.296 15.783 5.248 4.485 Hmax_075 : 20.067 28.700 6.959 8.400 Hmax_095 : 19.600 26.425 4.315 8.400 Hmax_100 : 20.700 19.700 5.057 8.400 Hmax_105 : 21.700 29.167 6.782 9.000 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8959 0.1041 DFMC : 0.9012 0.0988
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 543 NF0028030 MKKKSICFFVLILWLLVAIITSTLAATQTKSQDTFIDAFRLIQYDKGSQPFGCRVTGLNSPITTQRLGGSSALSAARNVI 80 MMKIEELLSSNKTSVQSILNREDVSGLLIVLPPKDDEISPNSIDQSRNIEKQFLVSTFDKPIYFIFQNEKTSEMLSYFEN 160 LSEFSLLSESYQAVVSEGEAKPIDQIPVVNIFSTLQGKQTEKSQTIGIVAHYDSVSSIPGLATTFNADGSGMIGLLEVSR 240 LFQKLYSIPSTKASHNLLFILTGGSRLGFAGTKHWIKQTGPRLVNQLDFVLCLDSLTSRVNSRDDESFKLFMHISEKTND 320 KNVINLYKHFVSTAKQLQIGLQFIEKKIDRELVWEHEVFAKKGIVSATISAQSVPSSSMLTRTNSLDISKVDIDQLRKSI 400 KLVSEALARHLYDIDHNIRFFEDENDKFIRAFIKNVENTSRFTPTLSKESDLVKTLKLTLQQFTSNDQTVQTQDFLLSNS 480 AYKFYTNIKVKLSLLKVTPITFDLILISSVIIYLLFLHIVLVGPKQVLFNIASLFEKQERKRK 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ............................................................... 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NF0028030 2 -----MK|KK 0.071 . NF0028030 3 ----MKK|KS 0.086 . NF0028030 4 ---MKKK|SI 0.183 . NF0028030 30 LAATQTK|SQ 0.101 . NF0028030 40 TFIDAFR|LI 0.081 . NF0028030 46 RLIQYDK|GS 0.069 . NF0028030 54 SQPFGCR|VT 0.077 . NF0028030 66 SPITTQR|LG 0.092 . NF0028030 77 SALSAAR|NV 0.101 . NF0028030 83 RNVIMMK|IE 0.059 . NF0028030 92 ELLSSNK|TS 0.056 . NF0028030 101 VQSILNR|ED 0.092 . NF0028030 114 LIVLPPK|DD 0.076 . NF0028030 127 NSIDQSR|NI 0.132 . NF0028030 131 QSRNIEK|QF 0.067 . NF0028030 140 LVSTFDK|PI 0.081 . NF0028030 150 FIFQNEK|TS 0.056 . NF0028030 181 VSEGEAK|PI 0.081 . NF0028030 198 FSTLQGK|QT 0.076 . NF0028030 202 QGKQTEK|SQ 0.083 . NF0028030 240 GLLEVSR|LF 0.071 . NF0028030 244 VSRLFQK|LY 0.058 . NF0028030 252 YSIPSTK|AS 0.069 . NF0028030 266 ILTGGSR|LG 0.075 . NF0028030 273 LGFAGTK|HW 0.063 . NF0028030 277 GTKHWIK|QT 0.083 . NF0028030 282 IKQTGPR|LV 0.126 . NF0028030 299 LDSLTSR|VN 0.089 . NF0028030 303 TSRVNSR|DD 0.119 . NF0028030 309 RDDESFK|LF 0.062 . NF0028030 317 FMHISEK|TN 0.068 . NF0028030 321 SEKTNDK|NV 0.074 . NF0028030 328 NVINLYK|HF 0.059 . NF0028030 335 HFVSTAK|QL 0.074 . NF0028030 346 GLQFIEK|KI 0.075 . NF0028030 347 LQFIEKK|ID 0.091 . NF0028030 350 IEKKIDR|EL 0.085 . NF0028030 361 EHEVFAK|KG 0.066 . NF0028030 362 HEVFAKK|GI 0.101 . NF0028030 382 SSSMLTR|TN 0.113 . NF0028030 390 NSLDISK|VD 0.060 . NF0028030 397 VDIDQLR|KS 0.082 . NF0028030 398 DIDQLRK|SI 0.080 . NF0028030 401 QLRKSIK|LV 0.113 . NF0028030 409 VSEALAR|HL 0.110 . NF0028030 419 DIDHNIR|FF 0.098 . NF0028030 427 FEDENDK|FI 0.065 . NF0028030 430 ENDKFIR|AF 0.109 . NF0028030 434 FIRAFIK|NV 0.077 . NF0028030 441 NVENTSR|FT 0.084 . NF0028030 448 FTPTLSK|ES 0.054 . NF0028030 454 KESDLVK|TL 0.068 . NF0028030 457 DLVKTLK|LT 0.067 . NF0028030 483 LSNSAYK|FY 0.072 . NF0028030 489 KFYTNIK|VK 0.055 . NF0028030 491 YTNIKVK|LS 0.061 . NF0028030 496 VKLSLLK|VT 0.057 . NF0028030 525 IVLVGPK|QV 0.064 . NF0028030 537 IASLFEK|QE 0.065 . NF0028030 540 LFEKQER|KR 0.077 . NF0028030 541 FEKQERK|RK 0.072 . NF0028030 542 EKQERKR|K- 0.180 . NF0028030 543 KQERKRK|-- 0.262 . ____________________________^_________________

  • Fasta :-

    >NF0028030 ATGAAAAAGAAGAGTATCTGTTTTTTTGTCTTGATTCTTTGGTTATTGGTTGCCATCATC ACATCAACTCTGGCGGCCACCCAAACAAAATCACAAGATACATTCATTGATGCTTTTAGG CTTATCCAATATGATAAAGGATCCCAACCATTTGGTTGTCGTGTTACTGGATTGAATTCT CCGATTACGACTCAAAGATTGGGAGGCTCTTCTGCTCTTTCCGCTGCCCGGAATGTCATC ATGATGAAAATTGAAGAATTATTATCATCCAACAAGACAAGTGTTCAATCAATTTTAAAT AGAGAAGATGTGAGTGGATTGTTGATTGTACTTCCACCAAAAGATGATGAAATTTCCCCA AATTCCATTGACCAATCCAGAAATATTGAAAAACAATTTCTAGTCTCCACCTTTGATAAG CCTATTTATTTCATTTTTCAGAATGAAAAGACTTCCGAAATGTTAAGCTATTTTGAAAAT TTGAGTGAATTTTCGTTGTTGAGTGAGTCCTATCAAGCAGTCGTTTCGGAAGGAGAGGCA AAGCCAATTGACCAAATTCCTGTTGTTAATATTTTCTCTACATTACAGGGCAAGCAAACG GAAAAGTCTCAAACCATTGGAATTGTTGCTCATTATGACTCGGTTAGTTCAATTCCAGGC TTGGCAACTACTTTCAATGCTGATGGAAGTGGAATGATTGGTTTGTTAGAGGTTTCAAGA TTATTCCAAAAACTCTATTCTATACCATCAACAAAAGCCTCTCATAATTTATTATTTATT TTAACGGGTGGAAGTAGATTGGGTTTTGCTGGAACTAAACACTGGATCAAACAAACAGGC CCAAGATTGGTAAATCAGTTAGACTTTGTTTTATGTTTAGATAGTCTCACCTCACGTGTA AATTCTCGTGATGATGAATCCTTCAAGTTATTTATGCATATTTCTGAAAAGACCAACGAT AAGAATGTGATTAATCTATACAAACATTTTGTATCTACCGCTAAACAATTACAGATTGGT CTTCAATTTATTGAAAAGAAGATTGATAGAGAATTAGTTTGGGAGCATGAAGTTTTCGCC AAGAAGGGAATTGTGTCTGCAACCATTTCAGCACAATCTGTGCCATCCTCTTCAATGTTA ACACGAACCAATTCTCTAGACATTTCTAAAGTGGATATTGATCAATTAAGAAAGTCCATC AAATTAGTTTCTGAGGCATTAGCCCGCCATCTCTATGATATTGATCATAACATTAGATTT TTTGAAGATGAAAATGATAAATTTATTAGGGCATTCATTAAGAATGTGGAGAATACTTCA AGATTTACACCAACCCTTTCAAAAGAGAGTGATTTAGTCAAAACTCTTAAATTGACTCTC CAACAATTTACAAGTAATGACCAAACGGTTCAAACTCAAGATTTTCTTTTGAGCAACTCT GCTTACAAATTCTATACGAATATCAAAGTTAAATTATCTCTTCTCAAAGTGACACCAATT ACATTTGATTTGATTCTCATTTCCTCAGTAATTATTTATTTATTATTCTTGCACATTGTG CTTGTGGGTCCAAAACAAGTGTTATTCAATATTGCTTCTTTGTTCGAAAAACAAGAAAGA AAACGAAAGTAA
  • Download Fasta

  • Fasta :-

    MKKKSICFFVLILWLLVAIITSTLAATQTKSQDTFIDAFRLIQYDKGSQPFGCRVTGLNS PITTQRLGGSSALSAARNVIMMKIEELLSSNKTSVQSILNREDVSGLLIVLPPKDDEISP NSIDQSRNIEKQFLVSTFDKPIYFIFQNEKTSEMLSYFENLSEFSLLSESYQAVVSEGEA KPIDQIPVVNIFSTLQGKQTEKSQTIGIVAHYDSVSSIPGLATTFNADGSGMIGLLEVSR LFQKLYSIPSTKASHNLLFILTGGSRLGFAGTKHWIKQTGPRLVNQLDFVLCLDSLTSRV NSRDDESFKLFMHISEKTNDKNVINLYKHFVSTAKQLQIGLQFIEKKIDRELVWEHEVFA KKGIVSATISAQSVPSSSMLTRTNSLDISKVDIDQLRKSIKLVSEALARHLYDIDHNIRF FEDENDKFIRAFIKNVENTSRFTPTLSKESDLVKTLKLTLQQFTSNDQTVQTQDFLLSNS AYKFYTNIKVKLSLLKVTPITFDLILISSVIIYLLFLHIVLVGPKQVLFNIASLFEKQER KRK

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
NF0028030302 SSRVNSRDDE0.998unspNF0028030399 SQLRKSIKLV0.99unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India