_IDPredictionOTHERSPmTPCS_Position
NF0028520OTHER0.9999250.0000000.000074
No Results
  • Fasta :-

    >NF0028520 MDEFMNRNKLGCQPPPGPPLLEIVQPKISHPPTKHTRSREKSSRKMLNLRKNMSTEAIEP SSLSSDDLGSAHTRRPRKLLKRTPSSHHNNDDGSNGHAYDRRNDGDDTMQQDENISSSNR TNTRKRNFGKRINGRRKEEVSDDSEDERDVKKYQKQQDENGDEDIENSDQLSAYLKGSAQ IIEQRIPFVKAQLPDKYENLFSNMKPINGTSTNVFVFDSAPQRTPNGTTLSTSANNSISS TTSSSLTTQDNGIEHNKELETPSTFLFPREKIISLNTWTEIKKIGPGLQNLGNTCFMNAA LQCIMYTPGMRNFLLTRKMGEPSKKFNALDAMSALAREMFNEKSESSSSSRTRAFSSVAP TFIAKHLKGIGGFVLGRQEDSHEFIIKLLDKMENAIVEKYKGKLNNMVLETNPIHQIFGG YLRSQIKTQETNYISNKYDAFIDVELQLNNCSSIEKSLQNYITPDRLDGKNKYKCPKTNT YVTASKKLTIHEAPINLILQLKRFNIFGKKVSKKISYEETLDLSPYMSNKNSVARYHLYG VLVHSGGSSCSGHYYAYVKNSNGIWYKMDDSSVTQVSQSTALSQQAYILFYSRNMEDFNH LESSTIFQESIRRYIEIQQQNKNGISASSSLTQSKDVEDSFELQTPPPMLTPSKPIPTAT TTPQNNGSPSTEANDQNSATPTQKSRSRKTSNLAIQTNGTCSQTADSSTTPNSSGTVDTP QKSSKKPTNLTIPSSHLTAPELPSPFYAPVKIDILENLTPQKLQVLKSQRPSNSVGILNL RSVGGLFSPISLTHSANINTMWINKNYLDTLKKDMFKKERLFRTDTPSTPLKVINPNEGM PQNPFPLDNFVSDSPLFSPTSQITPFVFEKKGIKRKTMEEGDNEEEESQHHELENETTQN SQANSLGTKISAKELFTSPSAQYSEEVDIWENDDARENAKQQRFINEKVLAPKIFKRDEY DRALDAGKKKKIRKKESSEDWMQINEAIQRTAERKHKQRK
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NF0028520.fa Sequence name : NF0028520 Sequence length : 1000 VALUES OF COMPUTED PARAMETERS Coef20 : 2.571 CoefTot : 0.000 ChDiff : 17 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.212 1.082 0.114 0.462 MesoH : -0.442 0.087 -0.408 0.164 MuHd_075 : 29.834 14.631 5.535 5.193 MuHd_095 : 21.074 10.465 5.866 2.490 MuHd_100 : 23.463 10.540 6.305 3.318 MuHd_105 : 24.602 10.094 6.068 4.087 Hmax_075 : 6.533 2.450 -1.615 2.567 Hmax_095 : 7.300 2.400 -0.361 2.230 Hmax_100 : 8.500 3.600 0.226 2.590 Hmax_105 : -3.600 -1.900 -2.281 1.000 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9474 0.0526 DFMC : 0.8922 0.1078
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 1000 NF0028520 MDEFMNRNKLGCQPPPGPPLLEIVQPKISHPPTKHTRSREKSSRKMLNLRKNMSTEAIEPSSLSSDDLGSAHTRRPRKLL 80 KRTPSSHHNNDDGSNGHAYDRRNDGDDTMQQDENISSSNRTNTRKRNFGKRINGRRKEEVSDDSEDERDVKKYQKQQDEN 160 GDEDIENSDQLSAYLKGSAQIIEQRIPFVKAQLPDKYENLFSNMKPINGTSTNVFVFDSAPQRTPNGTTLSTSANNSISS 240 TTSSSLTTQDNGIEHNKELETPSTFLFPREKIISLNTWTEIKKIGPGLQNLGNTCFMNAALQCIMYTPGMRNFLLTRKMG 320 EPSKKFNALDAMSALAREMFNEKSESSSSSRTRAFSSVAPTFIAKHLKGIGGFVLGRQEDSHEFIIKLLDKMENAIVEKY 400 KGKLNNMVLETNPIHQIFGGYLRSQIKTQETNYISNKYDAFIDVELQLNNCSSIEKSLQNYITPDRLDGKNKYKCPKTNT 480 YVTASKKLTIHEAPINLILQLKRFNIFGKKVSKKISYEETLDLSPYMSNKNSVARYHLYGVLVHSGGSSCSGHYYAYVKN 560 SNGIWYKMDDSSVTQVSQSTALSQQAYILFYSRNMEDFNHLESSTIFQESIRRYIEIQQQNKNGISASSSLTQSKDVEDS 640 FELQTPPPMLTPSKPIPTATTTPQNNGSPSTEANDQNSATPTQKSRSRKTSNLAIQTNGTCSQTADSSTTPNSSGTVDTP 720 QKSSKKPTNLTIPSSHLTAPELPSPFYAPVKIDILENLTPQKLQVLKSQRPSNSVGILNLRSVGGLFSPISLTHSANINT 800 MWINKNYLDTLKKDMFKKERLFRTDTPSTPLKVINPNEGMPQNPFPLDNFVSDSPLFSPTSQITPFVFEKKGIKRKTMEE 880 GDNEEEESQHHELENETTQNSQANSLGTKISAKELFTSPSAQYSEEVDIWENDDARENAKQQRFINEKVLAPKIFKRDEY 960 DRALDAGKKKKIRKKESSEDWMQINEAIQRTAERKHKQRK 1040 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 ................................................................................ 880 ................................................................................ 960 ........................................ 1040 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NF0028520 7 MDEFMNR|NK 0.079 . NF0028520 9 EFMNRNK|LG 0.059 . NF0028520 27 LEIVQPK|IS 0.075 . NF0028520 34 ISHPPTK|HT 0.096 . NF0028520 37 PPTKHTR|SR 0.156 . NF0028520 39 TKHTRSR|EK 0.113 . NF0028520 41 HTRSREK|SS 0.095 . NF0028520 44 SREKSSR|KM 0.097 . NF0028520 45 REKSSRK|ML 0.083 . NF0028520 50 RKMLNLR|KN 0.087 . NF0028520 51 KMLNLRK|NM 0.072 . NF0028520 74 LGSAHTR|RP 0.097 . NF0028520 75 GSAHTRR|PR 0.131 . NF0028520 77 AHTRRPR|KL 0.194 . NF0028520 78 HTRRPRK|LL 0.214 . NF0028520 81 RPRKLLK|RT 0.066 . NF0028520 82 PRKLLKR|TP 0.155 . NF0028520 101 NGHAYDR|RN 0.085 . NF0028520 102 GHAYDRR|ND 0.185 . NF0028520 120 NISSSNR|TN 0.102 . NF0028520 124 SNRTNTR|KR 0.085 . NF0028520 125 NRTNTRK|RN 0.088 . NF0028520 126 RTNTRKR|NF 0.291 . NF0028520 130 RKRNFGK|RI 0.080 . NF0028520 131 KRNFGKR|IN 0.244 . NF0028520 135 GKRINGR|RK 0.107 . NF0028520 136 KRINGRR|KE 0.155 . NF0028520 137 RINGRRK|EE 0.071 . NF0028520 148 DDSEDER|DV 0.215 . NF0028520 151 EDERDVK|KY 0.115 . NF0028520 152 DERDVKK|YQ 0.126 . NF0028520 155 DVKKYQK|QQ 0.064 . NF0028520 176 QLSAYLK|GS 0.089 . NF0028520 185 AQIIEQR|IP 0.075 . NF0028520 190 QRIPFVK|AQ 0.062 . NF0028520 196 KAQLPDK|YE 0.060 . NF0028520 205 NLFSNMK|PI 0.059 . NF0028520 223 FDSAPQR|TP 0.082 . NF0028520 257 NGIEHNK|EL 0.064 . NF0028520 269 STFLFPR|EK 0.116 . NF0028520 271 FLFPREK|II 0.068 . NF0028520 282 NTWTEIK|KI 0.079 . NF0028520 283 TWTEIKK|IG 0.075 . NF0028520 311 MYTPGMR|NF 0.068 . NF0028520 317 RNFLLTR|KM 0.076 . NF0028520 318 NFLLTRK|MG 0.070 . NF0028520 324 KMGEPSK|KF 0.064 . NF0028520 325 MGEPSKK|FN 0.104 . NF0028520 337 AMSALAR|EM 0.101 . NF0028520 343 REMFNEK|SE 0.070 . NF0028520 351 ESSSSSR|TR 0.080 . NF0028520 353 SSSSRTR|AF 0.210 . NF0028520 365 APTFIAK|HL 0.073 . NF0028520 368 FIAKHLK|GI 0.090 . NF0028520 377 GGFVLGR|QE 0.096 . NF0028520 387 SHEFIIK|LL 0.085 . NF0028520 391 IIKLLDK|ME 0.063 . NF0028520 399 ENAIVEK|YK 0.085 . NF0028520 401 AIVEKYK|GK 0.072 . NF0028520 403 VEKYKGK|LN 0.074 . NF0028520 423 IFGGYLR|SQ 0.121 . NF0028520 427 YLRSQIK|TQ 0.063 . NF0028520 437 TNYISNK|YD 0.068 . NF0028520 456 NCSSIEK|SL 0.078 . NF0028520 466 NYITPDR|LD 0.073 . NF0028520 470 PDRLDGK|NK 0.065 . NF0028520 472 RLDGKNK|YK 0.085 . NF0028520 474 DGKNKYK|CP 0.064 . NF0028520 477 NKYKCPK|TN 0.073 . NF0028520 486 TYVTASK|KL 0.064 . NF0028520 487 YVTASKK|LT 0.087 . NF0028520 502 NLILQLK|RF 0.059 . NF0028520 503 LILQLKR|FN 0.164 . NF0028520 509 RFNIFGK|KV 0.120 . NF0028520 510 FNIFGKK|VS 0.076 . NF0028520 513 FGKKVSK|KI 0.074 . NF0028520 514 GKKVSKK|IS 0.138 . NF0028520 530 SPYMSNK|NS 0.066 . NF0028520 535 NKNSVAR|YH 0.117 . NF0028520 559 HYYAYVK|NS 0.060 . NF0028520 567 SNGIWYK|MD 0.079 . NF0028520 593 YILFYSR|NM 0.077 . NF0028520 612 IFQESIR|RY 0.091 . NF0028520 613 FQESIRR|YI 0.174 . NF0028520 622 EIQQQNK|NG 0.058 . NF0028520 635 SSLTQSK|DV 0.132 . NF0028520 654 PMLTPSK|PI 0.069 . NF0028520 684 SATPTQK|SR 0.081 . NF0028520 686 TPTQKSR|SR 0.139 . NF0028520 688 TQKSRSR|KT 0.102 . NF0028520 689 QKSRSRK|TS 0.393 . NF0028520 722 TVDTPQK|SS 0.069 . NF0028520 725 TPQKSSK|KP 0.070 . NF0028520 726 PQKSSKK|PT 0.099 . NF0028520 751 PFYAPVK|ID 0.060 . NF0028520 762 ENLTPQK|LQ 0.051 . NF0028520 767 QKLQVLK|SQ 0.077 . NF0028520 770 QVLKSQR|PS 0.082 . NF0028520 781 VGILNLR|SV 0.167 . NF0028520 805 NTMWINK|NY 0.058 . NF0028520 812 NYLDTLK|KD 0.053 . NF0028520 813 YLDTLKK|DM 0.140 . NF0028520 817 LKKDMFK|KE 0.058 . NF0028520 818 KKDMFKK|ER 0.085 . NF0028520 820 DMFKKER|LF 0.089 . NF0028520 823 KKERLFR|TD 0.282 . NF0028520 832 TPSTPLK|VI 0.100 . NF0028520 870 TPFVFEK|KG 0.070 . NF0028520 871 PFVFEKK|GI 0.128 . NF0028520 874 FEKKGIK|RK 0.057 . NF0028520 875 EKKGIKR|KT 0.213 . NF0028520 876 KKGIKRK|TM 0.121 . NF0028520 909 ANSLGTK|IS 0.075 . NF0028520 913 GTKISAK|EL 0.079 . NF0028520 936 WENDDAR|EN 0.107 . NF0028520 940 DARENAK|QQ 0.065 . NF0028520 943 ENAKQQR|FI 0.153 . NF0028520 948 QRFINEK|VL 0.065 . NF0028520 953 EKVLAPK|IF 0.062 . NF0028520 956 LAPKIFK|RD 0.055 . NF0028520 957 APKIFKR|DE 0.223 . NF0028520 962 KRDEYDR|AL 0.121 . NF0028520 968 RALDAGK|KK 0.056 . NF0028520 969 ALDAGKK|KK 0.075 . NF0028520 970 LDAGKKK|KI 0.192 . NF0028520 971 DAGKKKK|IR 0.102 . NF0028520 973 GKKKKIR|KK 0.157 . NF0028520 974 KKKKIRK|KE 0.097 . NF0028520 975 KKKIRKK|ES 0.133 . NF0028520 990 INEAIQR|TA 0.111 . NF0028520 994 IQRTAER|KH 0.077 . NF0028520 995 QRTAERK|HK 0.093 . NF0028520 997 TAERKHK|QR 0.139 . NF0028520 999 ERKHKQR|K- 0.123 . NF0028520 1000 RKHKQRK|-- 0.138 . ____________________________^_________________
  • Fasta :-

    >NF0028520 ATGGACGAATTCATGAATAGAAACAAGTTGGGTTGTCAACCTCCTCCTGGTCCTCCTCTG CTCGAAATCGTTCAACCAAAAATCTCACACCCTCCAACGAAGCACACAAGATCACGAGAG AAGAGTAGCAGGAAAATGTTGAATTTAAGAAAAAATATGAGCACAGAAGCCATCGAGCCG TCCTCTCTCTCCTCCGATGATTTGGGTAGTGCTCACACGAGACGACCTCGCAAGTTATTG AAGAGAACACCCTCTTCCCATCACAACAACGATGATGGTAGTAACGGTCATGCGTACGAC CGTCGTAATGATGGAGATGATACGATGCAACAAGACGAAAATATTTCTTCATCAAACCGA ACAAACACAAGAAAACGAAATTTTGGAAAACGAATAAACGGAAGACGAAAAGAAGAGGTT TCTGATGATAGTGAGGATGAAAGAGATGTTAAAAAATATCAAAAACAACAAGATGAGAAC GGTGATGAGGATATTGAAAATTCGGACCAGTTGAGTGCCTATCTCAAAGGTTCTGCTCAA ATTATTGAACAAAGAATTCCATTTGTAAAGGCTCAGTTGCCTGATAAGTATGAAAATCTA TTTTCCAATATGAAACCCATCAATGGCACATCCACGAATGTGTTTGTGTTTGATTCAGCT CCTCAAAGGACTCCCAATGGTACGACATTGTCCACCTCTGCAAACAATTCCATTTCCTCT ACGACATCATCATCGTTGACGACACAAGACAATGGCATTGAGCATAACAAGGAATTAGAG ACACCATCGACATTTCTATTTCCGAGAGAAAAGATCATATCTCTTAACACATGGACCGAG ATTAAAAAGATTGGACCTGGTTTGCAAAATCTAGGAAATACATGCTTTATGAATGCAGCA TTGCAATGTATCATGTATACACCAGGTATGCGCAACTTTTTACTCACAAGAAAGATGGGA GAACCTTCCAAAAAGTTCAATGCACTAGATGCCATGTCAGCACTTGCCCGAGAAATGTTT AACGAAAAGTCCGAGTCGTCATCATCATCTCGAACAAGAGCCTTCTCATCCGTAGCACCT ACTTTTATTGCAAAACATTTAAAAGGCATTGGCGGTTTTGTGTTGGGTAGACAAGAGGAT TCTCATGAATTCATTATCAAATTACTTGACAAGATGGAGAATGCAATCGTGGAAAAATAC AAAGGAAAACTTAATAATATGGTTCTAGAGACGAATCCAATTCATCAAATTTTTGGTGGC TACCTTAGAAGCCAAATCAAAACTCAAGAGACAAATTACATTTCAAACAAGTACGACGCA TTTATTGATGTTGAGTTGCAATTGAACAATTGTAGCTCAATTGAAAAATCCCTTCAAAAT TACATTACACCTGACCGATTAGATGGAAAAAACAAGTACAAATGCCCTAAAACAAACACC TATGTCACAGCCTCCAAAAAACTTACCATTCATGAAGCTCCAATTAATTTAATTCTTCAA CTTAAACGATTTAACATTTTTGGAAAGAAAGTCAGCAAAAAGATATCCTACGAAGAAACT TTAGATCTCTCCCCTTACATGAGCAACAAAAATTCTGTGGCAAGATATCACCTTTATGGC GTTTTGGTGCATTCTGGCGGCTCCTCATGCTCCGGTCATTACTACGCCTATGTTAAGAAT AGCAATGGTATATGGTACAAAATGGACGACTCATCAGTCACACAAGTGAGCCAAAGCACC GCACTTTCTCAGCAGGCCTATATATTATTCTACTCGAGAAACATGGAAGATTTTAATCAC CTAGAATCATCCACAATTTTTCAAGAGTCTATCCGACGATACATAGAAATTCAACAACAA AACAAGAATGGAATCTCTGCCTCCTCCTCTTTAACCCAATCTAAAGATGTTGAAGACTCA TTTGAGTTGCAAACTCCTCCACCCATGCTTACACCCTCCAAACCTATTCCTACGGCAACA ACAACGCCTCAAAATAATGGCTCACCATCCACCGAAGCCAATGATCAAAACTCTGCCACT CCCACCCAAAAGTCTCGATCTAGAAAAACATCCAATCTTGCAATTCAAACCAATGGAACT TGCTCACAAACTGCTGACTCATCCACTACTCCTAATTCTTCAGGAACAGTCGACACACCT CAAAAATCTTCCAAAAAACCAACGAACCTTACCATTCCATCCTCTCACCTTACAGCACCT GAGCTTCCATCTCCATTTTATGCCCCAGTTAAGATTGACATATTGGAAAATTTGACGCCA CAAAAACTACAAGTCTTAAAATCTCAAAGACCTTCAAATTCTGTTGGCATTCTCAACCTA CGAAGTGTTGGAGGTTTATTTAGCCCAATCTCTCTCACTCATTCAGCCAACATCAATACT ATGTGGATCAATAAGAATTATCTCGATACTCTCAAGAAAGACATGTTCAAAAAAGAACGA TTGTTTCGTACTGACACACCTTCCACGCCTCTCAAGGTTATAAATCCCAACGAAGGAATG CCACAGAATCCATTCCCTCTTGACAATTTTGTGTCTGACTCCCCTCTCTTCTCTCCAACC TCACAAATTACACCATTTGTGTTTGAAAAGAAAGGTATCAAGAGAAAGACTATGGAGGAA GGTGATAACGAAGAAGAAGAGTCCCAACACCACGAACTTGAAAACGAAACAACACAAAAT TCCCAAGCTAACTCATTAGGCACTAAAATTTCTGCAAAAGAACTATTCACCTCTCCTTCT GCTCAATATTCTGAAGAGGTCGATATTTGGGAGAATGATGACGCGAGAGAAAATGCAAAA CAGCAACGATTCATCAACGAGAAAGTTCTTGCTCCAAAAATATTCAAAAGAGATGAATAC GATCGAGCTTTGGATGCAGGTAAAAAGAAAAAGATTAGAAAGAAAGAGAGCTCTGAAGAT TGGATGCAAATCAATGAAGCTATTCAGAGAACAGCTGAAAGAAAGCACAAACAACGAAAG TAA
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  • Fasta :-

    MDEFMNRNKLGCQPPPGPPLLEIVQPKISHPPTKHTRSREKSSRKMLNLRKNMSTEAIEP SSLSSDDLGSAHTRRPRKLLKRTPSSHHNNDDGSNGHAYDRRNDGDDTMQQDENISSSNR TNTRKRNFGKRINGRRKEEVSDDSEDERDVKKYQKQQDENGDEDIENSDQLSAYLKGSAQ IIEQRIPFVKAQLPDKYENLFSNMKPINGTSTNVFVFDSAPQRTPNGTTLSTSANNSISS TTSSSLTTQDNGIEHNKELETPSTFLFPREKIISLNTWTEIKKIGPGLQNLGNTCFMNAA LQCIMYTPGMRNFLLTRKMGEPSKKFNALDAMSALAREMFNEKSESSSSSRTRAFSSVAP TFIAKHLKGIGGFVLGRQEDSHEFIIKLLDKMENAIVEKYKGKLNNMVLETNPIHQIFGG YLRSQIKTQETNYISNKYDAFIDVELQLNNCSSIEKSLQNYITPDRLDGKNKYKCPKTNT YVTASKKLTIHEAPINLILQLKRFNIFGKKVSKKISYEETLDLSPYMSNKNSVARYHLYG VLVHSGGSSCSGHYYAYVKNSNGIWYKMDDSSVTQVSQSTALSQQAYILFYSRNMEDFNH LESSTIFQESIRRYIEIQQQNKNGISASSSLTQSKDVEDSFELQTPPPMLTPSKPIPTAT TTPQNNGSPSTEANDQNSATPTQKSRSRKTSNLAIQTNGTCSQTADSSTTPNSSGTVDTP QKSSKKPTNLTIPSSHLTAPELPSPFYAPVKIDILENLTPQKLQVLKSQRPSNSVGILNL RSVGGLFSPISLTHSANINTMWINKNYLDTLKKDMFKKERLFRTDTPSTPLKVINPNEGM PQNPFPLDNFVSDSPLFSPTSQITPFVFEKKGIKRKTMEEGDNEEEESQHHELENETTQN SQANSLGTKISAKELFTSPSAQYSEEVDIWENDDARENAKQQRFINEKVLAPKIFKRDEY DRALDAGKKKKIRKKESSEDWMQINEAIQRTAERKHKQRK

  • title: Active Site
  • coordinates: N290,C295,H553,D570
IDSitePositionGscoreIscoreIDSitePositionGscoreIscore
NF0028520T2320.5290.054NF0028520T2290.5010.046
IDSitePositionGscoreIscoreIDSitePositionGscoreIscore
NF0028520T2320.5290.054NF0028520T2290.5010.046
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
NF002852086 SRTPSSHHNN0.992unspNF002852086 SRTPSSHHNN0.992unspNF002852086 SRTPSSHHNN0.992unspNF0028520144 SVSDDSEDER0.995unspNF0028520348 SSESSSSSRT0.996unspNF0028520350 SSSSSSRTRA0.993unspNF0028520516 SSKKISYEET0.997unspNF0028520670 SNGSPSTEAN0.992unspNF0028520687 SQKSRSRKTS0.995unspNF0028520723 STPQKSSKKP0.991unspNF0028520977 SRKKESSEDW0.998unspNF002852038 SKHTRSREKS0.995unspNF002852042 SSREKSSRKM0.995unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India