NF0037620 | probable xaa-pro aminopeptidase 3 isoform x1

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0004177      GO:0030145      

  • Computed_GO_Functions:  aminopeptidase activity      manganese ion binding      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
NF0037620OTHER0.9254670.0019390.072594
No Results

  • Fasta :-

    >NF0037620 MKHRFKFFIPSTTTTQSRTSSSFKPCLHFKNSLIRNEQYLTQCNDRKCYSMISIDNIPYT YQVQPSSHAHLMKEDEIAPGFTLEEFKQRHYNLFNLMKENSVLILGSRKEYFMSPNVRYP YKQDSSFYYLSGVSEPDCFLVFKKTGSGNSITLYVREKSKKEFFHGVVNGVQSLQNLWGD YLQVKQVKAFIRDLQSLVKNFNTLYYDPDYDERLSQIIVESGGGIEFFKGPMQKYKIFYP ESLIATLRSIKSKAEIDLTKRCAHISAQAFIELMKQIRPGMSEAHAEAILEFQCKMRGAQ RLGYPPVVASGDRANIIHYLTNNHIMEDGDLIRIDGAAEYYGYMNDITRTFPVNGKFTPI QKMLYQVVLDIQKKCINYLKKHLTETITINSFHDYSMYLTQDALAEHFNIGLGYGKNNAE SCQLIEEVLYPHMIGHATGMNIHEDVPGRDDKLGPGMIITCEPGIYFSKQVKNYIPNPQL HGLGVQIEDDILLTENGIEILTHETPKEVEEIEHIMSISSKTPSIPFSF
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NF0037620.fa Sequence name : NF0037620 Sequence length : 529 VALUES OF COMPUTED PARAMETERS Coef20 : 4.586 CoefTot : -0.538 ChDiff : -3 ZoneTo : 36 KR : 7 DE : 0 CleavSite : 20 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.465 0.759 -0.023 0.425 MesoH : -0.882 0.047 -0.519 0.178 MuHd_075 : 25.033 14.157 5.642 6.126 MuHd_095 : 26.910 20.198 9.796 5.932 MuHd_100 : 28.466 21.339 9.511 6.611 MuHd_105 : 36.271 24.215 11.103 8.124 Hmax_075 : 9.450 6.650 1.906 3.232 Hmax_095 : 4.700 8.200 0.629 2.430 Hmax_100 : 6.800 12.800 1.371 3.540 Hmax_105 : 16.333 12.700 3.595 4.153 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.0181 0.9819 DFMC : 0.0362 0.9638 This protein is probably imported in mitochondria. f(Ser) = 0.1667 f(Arg) = 0.0833 CMi = 0.89286 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 529 NF0037620 MKHRFKFFIPSTTTTQSRTSSSFKPCLHFKNSLIRNEQYLTQCNDRKCYSMISIDNIPYTYQVQPSSHAHLMKEDEIAPG 80 FTLEEFKQRHYNLFNLMKENSVLILGSRKEYFMSPNVRYPYKQDSSFYYLSGVSEPDCFLVFKKTGSGNSITLYVREKSK 160 KEFFHGVVNGVQSLQNLWGDYLQVKQVKAFIRDLQSLVKNFNTLYYDPDYDERLSQIIVESGGGIEFFKGPMQKYKIFYP 240 ESLIATLRSIKSKAEIDLTKRCAHISAQAFIELMKQIRPGMSEAHAEAILEFQCKMRGAQRLGYPPVVASGDRANIIHYL 320 TNNHIMEDGDLIRIDGAAEYYGYMNDITRTFPVNGKFTPIQKMLYQVVLDIQKKCINYLKKHLTETITINSFHDYSMYLT 400 QDALAEHFNIGLGYGKNNAESCQLIEEVLYPHMIGHATGMNIHEDVPGRDDKLGPGMIITCEPGIYFSKQVKNYIPNPQL 480 HGLGVQIEDDILLTENGIEILTHETPKEVEEIEHIMSISSKTPSIPFSF 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................. 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NF0037620 2 -----MK|HR 0.063 . NF0037620 4 ---MKHR|FK 0.128 . NF0037620 6 -MKHRFK|FF 0.081 . NF0037620 18 TTTTQSR|TS 0.091 . NF0037620 24 RTSSSFK|PC 0.070 . NF0037620 30 KPCLHFK|NS 0.064 . NF0037620 35 FKNSLIR|NE 0.076 . NF0037620 46 LTQCNDR|KC 0.079 . NF0037620 47 TQCNDRK|CY 0.087 . NF0037620 73 SHAHLMK|ED 0.084 . NF0037620 87 FTLEEFK|QR 0.060 . NF0037620 89 LEEFKQR|HY 0.094 . NF0037620 98 NLFNLMK|EN 0.069 . NF0037620 108 VLILGSR|KE 0.065 . NF0037620 109 LILGSRK|EY 0.074 . NF0037620 118 FMSPNVR|YP 0.119 . NF0037620 122 NVRYPYK|QD 0.069 . NF0037620 143 DCFLVFK|KT 0.075 . NF0037620 144 CFLVFKK|TG 0.088 . NF0037620 156 SITLYVR|EK 0.092 . NF0037620 158 TLYVREK|SK 0.093 . NF0037620 160 YVREKSK|KE 0.061 . NF0037620 161 VREKSKK|EF 0.142 . NF0037620 185 GDYLQVK|QV 0.083 . NF0037620 188 LQVKQVK|AF 0.071 . NF0037620 192 QVKAFIR|DL 0.115 . NF0037620 199 DLQSLVK|NF 0.057 . NF0037620 213 DPDYDER|LS 0.077 . NF0037620 229 GGIEFFK|GP 0.076 . NF0037620 234 FKGPMQK|YK 0.069 . NF0037620 236 GPMQKYK|IF 0.079 . NF0037620 248 SLIATLR|SI 0.119 . NF0037620 251 ATLRSIK|SK 0.139 . NF0037620 253 LRSIKSK|AE 0.087 . NF0037620 260 AEIDLTK|RC 0.060 . NF0037620 261 EIDLTKR|CA 0.195 . NF0037620 275 AFIELMK|QI 0.071 . NF0037620 278 ELMKQIR|PG 0.088 . NF0037620 295 ILEFQCK|MR 0.083 . NF0037620 297 EFQCKMR|GA 0.118 . NF0037620 301 KMRGAQR|LG 0.076 . NF0037620 313 VVASGDR|AN 0.082 . NF0037620 333 EDGDLIR|ID 0.104 . NF0037620 349 YMNDITR|TF 0.080 . NF0037620 356 TFPVNGK|FT 0.066 . NF0037620 362 KFTPIQK|ML 0.066 . NF0037620 373 VVLDIQK|KC 0.054 . NF0037620 374 VLDIQKK|CI 0.090 . NF0037620 380 KCINYLK|KH 0.058 . NF0037620 381 CINYLKK|HL 0.121 . NF0037620 416 IGLGYGK|NN 0.055 . NF0037620 449 HEDVPGR|DD 0.112 . NF0037620 452 VPGRDDK|LG 0.111 . NF0037620 469 PGIYFSK|QV 0.076 . NF0037620 472 YFSKQVK|NY 0.068 . NF0037620 507 LTHETPK|EV 0.123 . NF0037620 521 IMSISSK|TP 0.073 . ____________________________^_________________

  • Fasta :-

    >NF0037620 ATGAAACATCGATTCAAATTTTTCATTCCTAGTACAACCACAACTCAATCGAGAACATCA TCATCATTCAAGCCTTGTTTGCATTTTAAAAATTCTCTCATACGGAATGAACAATATTTA ACTCAATGCAATGATCGGAAATGTTATTCAATGATATCCATTGATAACATACCGTACACC TACCAAGTACAACCATCTTCTCATGCTCATTTGATGAAAGAAGACGAAATTGCACCTGGA TTTACTTTGGAAGAGTTCAAACAAAGACATTATAATTTATTTAATTTAATGAAAGAAAAT TCTGTATTGATTTTAGGATCAAGAAAAGAATATTTCATGTCTCCAAATGTTAGATATCCC TATAAGCAGGACTCTAGTTTTTATTATTTAAGTGGTGTGAGCGAACCAGATTGCTTTTTA GTGTTCAAGAAGACAGGATCTGGAAATTCAATAACTTTATATGTGAGAGAAAAAAGCAAA AAGGAATTCTTTCATGGGGTTGTCAATGGAGTTCAATCATTGCAAAATCTTTGGGGAGAT TATCTTCAAGTAAAGCAAGTGAAAGCATTTATAAGAGATTTACAGTCACTTGTTAAAAAC TTCAACACGCTTTACTATGATCCTGACTATGATGAAAGATTGTCACAAATAATTGTCGAG AGTGGAGGAGGAATTGAATTCTTTAAAGGCCCTATGCAAAAGTACAAAATTTTCTATCCT GAAAGTTTAATTGCCACTCTTAGGAGCATTAAATCCAAGGCAGAAATTGATCTCACAAAA CGATGTGCACACATCAGTGCTCAAGCTTTTATTGAGCTGATGAAACAGATTAGGCCTGGA ATGTCTGAAGCACATGCAGAAGCCATCTTAGAGTTTCAATGTAAAATGAGAGGAGCACAG AGACTTGGTTATCCACCTGTAGTTGCCTCTGGGGATAGAGCAAATATCATACACTATCTT ACCAATAATCACATTATGGAAGATGGAGACTTGATTAGAATTGATGGAGCTGCTGAATAT TATGGATACATGAATGATATAACACGAACATTTCCTGTGAATGGTAAATTCACACCGATT CAGAAAATGCTCTATCAAGTTGTGTTGGATATTCAAAAGAAATGCATCAATTATCTGAAA AAGCACTTAACAGAAACGATAACGATTAATTCTTTCCATGACTACTCTATGTATCTCACT CAGGATGCATTAGCTGAACATTTTAATATTGGTTTGGGTTATGGGAAAAACAATGCTGAG TCATGTCAACTCATTGAAGAGGTTCTGTATCCTCACATGATTGGTCACGCTACAGGAATG AACATCCATGAAGATGTTCCAGGAAGAGACGACAAATTGGGTCCTGGAATGATCATCACT TGTGAACCAGGAATTTACTTTTCAAAACAAGTGAAGAATTACATACCTAATCCTCAATTG CATGGACTTGGTGTTCAAATTGAAGATGACATTTTACTCACAGAAAATGGTATAGAAATT CTCACACATGAAACACCGAAAGAGGTCGAAGAAATCGAACATATTATGAGCATTAGTAGC AAGACACCGTCAATTCCGTTTTCGTTTTAA
  • Download Fasta

  • Fasta :-

    MKHRFKFFIPSTTTTQSRTSSSFKPCLHFKNSLIRNEQYLTQCNDRKCYSMISIDNIPYT YQVQPSSHAHLMKEDEIAPGFTLEEFKQRHYNLFNLMKENSVLILGSRKEYFMSPNVRYP YKQDSSFYYLSGVSEPDCFLVFKKTGSGNSITLYVREKSKKEFFHGVVNGVQSLQNLWGD YLQVKQVKAFIRDLQSLVKNFNTLYYDPDYDERLSQIIVESGGGIEFFKGPMQKYKIFYP ESLIATLRSIKSKAEIDLTKRCAHISAQAFIELMKQIRPGMSEAHAEAILEFQCKMRGAQ RLGYPPVVASGDRANIIHYLTNNHIMEDGDLIRIDGAAEYYGYMNDITRTFPVNGKFTPI QKMLYQVVLDIQKKCINYLKKHLTETITINSFHDYSMYLTQDALAEHFNIGLGYGKNNAE SCQLIEEVLYPHMIGHATGMNIHEDVPGRDDKLGPGMIITCEPGIYFSKQVKNYIPNPQL HGLGVQIEDDILLTENGIEILTHETPKEVEEIEHIMSISSKTPSIPFSF

  • title: active site
  • coordinates: H318,D335,D346,H436,E462,E488
IDSitePositionGscoreIscore
NF0037620S5280.5170.041
IDSitePositionGscoreIscore
NF0037620S5280.5170.041
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
NF0037620505 TLTHETPKEV0.993unspNF0037620505 TLTHETPKEV0.993unspNF0037620505 TLTHETPKEV0.993unspNF003762020 SQSRTSSSFK0.997unspNF0037620159 SVREKSKKEF0.998unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India