NF0039260 | 26s protease regulatory subunit 7-like

_IDPredictionOTHERSPmTPCS_Position
NF0039260OTHER0.9997750.0000030.000222
No Results

  • Fasta :-

    >NF0039260 MSQQEQKQQQQSTSDNKTPEKPAKDNDEEKKDAPINPLDAEEIKLIKRYGQGAYFTKIKD TEESLKKMVQEVNELCGVKESETGLANPSLWDIQQDKATLQHEMPLQVARCTKIIDDDEE EPKYLINVRQIAKYVVGLGENVAPTDIEEGMRIGVDRTKYQIKIPLPPKIDASVTMMTVE EKPDVTYNDVGGSKEQIDQIREVVETPLLHPERFEQLHIDPPKGVLLYGPPGTGKTLLAR AVANRTDATFIRVIGSELVQKYVGEGARMVRELFQMARQRKACIIFFDEVDAIGGTRFDD GAGGDNEVQRTMLEIVNQLDGFEARGNIKVLMATNRPDILDPALMRPGRLDRKIEFGLPD LEARTNIFRIHTKNMNVEKDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKTVSEK DMLDAINKVIKGYQRFSATPTYQESQHIQ
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NF0039260.fa Sequence name : NF0039260 Sequence length : 449 VALUES OF COMPUTED PARAMETERS Coef20 : 2.825 CoefTot : -0.198 ChDiff : -9 ZoneTo : 4 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.182 0.924 -0.104 0.371 MesoH : -1.251 0.144 -0.484 0.086 MuHd_075 : 9.396 2.895 3.084 1.791 MuHd_095 : 7.728 3.930 1.422 1.601 MuHd_100 : 6.061 4.438 2.039 2.151 MuHd_105 : 5.961 4.347 2.785 2.208 Hmax_075 : -10.850 -14.817 -6.681 -3.173 Hmax_095 : -15.313 -12.950 -7.737 -3.185 Hmax_100 : -11.300 -10.900 -6.429 -2.140 Hmax_105 : -12.367 -13.700 -6.926 -3.060 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9934 0.0066 DFMC : 0.9808 0.0192
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 449 NF0039260 MSQQEQKQQQQSTSDNKTPEKPAKDNDEEKKDAPINPLDAEEIKLIKRYGQGAYFTKIKDTEESLKKMVQEVNELCGVKE 80 SETGLANPSLWDIQQDKATLQHEMPLQVARCTKIIDDDEEEPKYLINVRQIAKYVVGLGENVAPTDIEEGMRIGVDRTKY 160 QIKIPLPPKIDASVTMMTVEEKPDVTYNDVGGSKEQIDQIREVVETPLLHPERFEQLHIDPPKGVLLYGPPGTGKTLLAR 240 AVANRTDATFIRVIGSELVQKYVGEGARMVRELFQMARQRKACIIFFDEVDAIGGTRFDDGAGGDNEVQRTMLEIVNQLD 320 GFEARGNIKVLMATNRPDILDPALMRPGRLDRKIEFGLPDLEARTNIFRIHTKNMNVEKDIRFELLARLCPNSTGAEIRS 400 VCTEAGMFAIRARRKTVSEKDMLDAINKVIKGYQRFSATPTYQESQHIQ 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................. 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NF0039260 7 MSQQEQK|QQ 0.069 . NF0039260 17 QSTSDNK|TP 0.056 . NF0039260 21 DNKTPEK|PA 0.067 . NF0039260 24 TPEKPAK|DN 0.112 . NF0039260 30 KDNDEEK|KD 0.067 . NF0039260 31 DNDEEKK|DA 0.127 . NF0039260 44 LDAEEIK|LI 0.067 . NF0039260 47 EEIKLIK|RY 0.063 . NF0039260 48 EIKLIKR|YG 0.148 . NF0039260 57 QGAYFTK|IK 0.080 . NF0039260 59 AYFTKIK|DT 0.096 . NF0039260 66 DTEESLK|KM 0.059 . NF0039260 67 TEESLKK|MV 0.129 . NF0039260 79 NELCGVK|ES 0.065 . NF0039260 97 WDIQQDK|AT 0.074 . NF0039260 110 MPLQVAR|CT 0.138 . NF0039260 113 QVARCTK|II 0.195 . NF0039260 123 DDEEEPK|YL 0.069 . NF0039260 129 KYLINVR|QI 0.094 . NF0039260 133 NVRQIAK|YV 0.080 . NF0039260 152 DIEEGMR|IG 0.067 . NF0039260 157 MRIGVDR|TK 0.116 . NF0039260 159 IGVDRTK|YQ 0.065 . NF0039260 163 RTKYQIK|IP 0.058 . NF0039260 169 KIPLPPK|ID 0.062 . NF0039260 182 MMTVEEK|PD 0.060 . NF0039260 194 NDVGGSK|EQ 0.061 . NF0039260 201 EQIDQIR|EV 0.101 . NF0039260 213 PLLHPER|FE 0.082 . NF0039260 223 LHIDPPK|GV 0.083 . NF0039260 235 GPPGTGK|TL 0.058 . NF0039260 240 GKTLLAR|AV 0.112 . NF0039260 245 ARAVANR|TD 0.098 . NF0039260 252 TDATFIR|VI 0.156 . NF0039260 261 GSELVQK|YV 0.132 . NF0039260 268 YVGEGAR|MV 0.138 . NF0039260 271 EGARMVR|EL 0.266 . NF0039260 278 ELFQMAR|QR 0.086 . NF0039260 280 FQMARQR|KA 0.135 . NF0039260 281 QMARQRK|AC 0.283 . NF0039260 297 DAIGGTR|FD 0.098 . NF0039260 310 GDNEVQR|TM 0.118 . NF0039260 325 LDGFEAR|GN 0.160 . NF0039260 329 EARGNIK|VL 0.059 . NF0039260 336 VLMATNR|PD 0.076 . NF0039260 346 LDPALMR|PG 0.072 . NF0039260 349 ALMRPGR|LD 0.343 . NF0039260 352 RPGRLDR|KI 0.457 . NF0039260 353 PGRLDRK|IE 0.069 . NF0039260 364 LPDLEAR|TN 0.091 . NF0039260 369 ARTNIFR|IH 0.087 . NF0039260 373 IFRIHTK|NM 0.067 . NF0039260 379 KNMNVEK|DI 0.093 . NF0039260 382 NVEKDIR|FE 0.071 . NF0039260 388 RFELLAR|LC 0.072 . NF0039260 399 STGAEIR|SV 0.322 . NF0039260 411 AGMFAIR|AR 0.081 . NF0039260 413 MFAIRAR|RK 0.124 . NF0039260 414 FAIRARR|KT 0.331 . NF0039260 415 AIRARRK|TV 0.131 . NF0039260 420 RKTVSEK|DM 0.079 . NF0039260 428 MLDAINK|VI 0.061 . NF0039260 431 AINKVIK|GY 0.071 . NF0039260 435 VIKGYQR|FS 0.082 . ____________________________^_________________

  • Fasta :-

    >NF0039260 ATGTCCCAACAAGAGCAAAAACAACAACAGCAATCAACATCGGATAACAAAACTCCAGAG AAGCCAGCAAAAGACAATGATGAGGAGAAGAAAGACGCACCAATTAATCCATTGGATGCG GAAGAAATTAAACTGATCAAACGATATGGCCAAGGAGCTTATTTTACAAAGATAAAAGAC ACAGAGGAATCTCTCAAAAAAATGGTTCAAGAAGTGAACGAATTGTGTGGTGTAAAAGAA TCGGAAACAGGATTAGCAAACCCAAGTCTTTGGGATATTCAACAAGACAAAGCAACACTT CAACATGAAATGCCATTACAAGTTGCTAGATGTACAAAAATTATCGATGATGACGAGGAA GAACCAAAGTATTTGATCAACGTTCGTCAAATTGCAAAATATGTGGTAGGATTGGGAGAA AATGTAGCCCCAACAGATATCGAAGAAGGAATGCGTATTGGTGTGGATCGTACAAAATAT CAAATCAAAATTCCTCTGCCACCTAAAATTGATGCCAGTGTAACAATGATGACTGTAGAA GAAAAACCAGATGTAACTTACAATGATGTTGGAGGATCCAAGGAGCAAATTGACCAAATT CGTGAGGTTGTTGAGACGCCGCTTCTTCATCCTGAAAGATTTGAACAACTTCACATTGAT CCTCCAAAGGGTGTCTTATTATACGGACCTCCAGGTACAGGAAAGACCCTTCTTGCAAGA GCTGTCGCCAACAGAACGGATGCAACATTTATTCGTGTGATTGGTTCAGAATTAGTTCAA AAGTATGTCGGTGAAGGTGCTCGTATGGTTAGAGAGCTGTTCCAAATGGCCAGACAACGT AAAGCTTGTATTATTTTCTTTGATGAAGTCGATGCTATCGGTGGTACCCGTTTTGACGAT GGTGCTGGTGGTGACAATGAAGTTCAAAGAACTATGCTCGAAATTGTCAATCAATTGGAT GGCTTCGAAGCTCGTGGAAACATTAAGGTACTCATGGCTACAAACAGACCTGATATTTTG GATCCTGCATTGATGCGTCCAGGTAGATTGGATCGTAAAATTGAGTTTGGTCTTCCTGAC CTTGAAGCTCGAACTAACATCTTTAGAATTCACACTAAGAACATGAACGTTGAAAAAGAT ATCAGATTTGAACTTTTAGCTCGTTTATGTCCAAACTCAACAGGTGCTGAAATTAGATCT GTATGTACAGAAGCTGGTATGTTTGCCATTAGAGCCAGAAGAAAGACTGTCTCAGAAAAG GACATGCTTGATGCCATTAACAAGGTCATTAAGGGCTATCAACGATTCAGTGCAACCCCA ACCTATCAAGAAAGTCAACACATTCAATAA
  • Download Fasta

  • Fasta :-

    MSQQEQKQQQQSTSDNKTPEKPAKDNDEEKKDAPINPLDAEEIKLIKRYGQGAYFTKIKD TEESLKKMVQEVNELCGVKESETGLANPSLWDIQQDKATLQHEMPLQVARCTKIIDDDEE EPKYLINVRQIAKYVVGLGENVAPTDIEEGMRIGVDRTKYQIKIPLPPKIDASVTMMTVE EKPDVTYNDVGGSKEQIDQIREVVETPLLHPERFEQLHIDPPKGVLLYGPPGTGKTLLAR AVANRTDATFIRVIGSELVQKYVGEGARMVRELFQMARQRKACIIFFDEVDAIGGTRFDD GAGGDNEVQRTMLEIVNQLDGFEARGNIKVLMATNRPDILDPALMRPGRLDRKIEFGLPD LEARTNIFRIHTKNMNVEKDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKTVSEK DMLDAINKVIKGYQRFSATPTYQESQHIQ

  • title: ATP binding site
  • coordinates: P230,P231,G232,T233,G234,K235,T236,L237,D288,N335
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
NF003926012 SQQQQSTSDN0.997unspNF0039260418 SRKTVSEKDM0.998unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India