NF0040310 | ubiquitin carboxyl-terminal hydrolase 4 isoform x4

_IDPredictionOTHERSPmTPCS_Position
NF0040310OTHER0.9999790.0000070.000014
No Results

  • Fasta :-

    >NF0040310 MASEHDDASASSSAPAQVDNNKMDDEVQSHPETNNHQDLQSVGKTGNSDHSDAMITDEDD QASSSAPTTSFSLEKFYSEFQRLIQQHSMPTSEGETWYIVEGKWMGALANMESSHCSPGP IDNSLLISPESDPQNPRLKDGLQEQSDYDLVPEEIWNLFIRYFGGGPAIPRKTVIVNKDS IRKTYTVEVYPYEISVAVVTNENVNELDWVDYEFSKNDTIDEVFEKVKRDFNLQNKECKL WKAIMDSPSEEVNVSILRDETLENLLERKVGQRFIIEVGPKWSIDTSSLEESHANAMRTA SNSRIQITGKTAQERRKMSYETPGVCGLANLGNTCFMNSGLQCLTHTPVFYEYFVNDHYV KEINKTNVLGMGGAMAIAFGNLMKEMWSGEHSYVSPVEFKRVIGKYAPQFAGYQQQDSQE LISFLLDGLHEDLNRVKDKPSTTPVEAKGREDAIVAKESWETHKLRNNSIIVDKFQGQLK STLHCPKCDNVSITFDPFMYLTLPIPVEKNRKISFLVFLNNTYPDEIEQSVENDNTKISN MPIKISCIVNKHGSVSELRDAVLDQLSLNPKEDHDRCLIYEIFNNRVYKFLSDHDPISGI LDNDTLHCQIMPKISDLKYNEWVFTGKSFERLLSLPPNVHALYSSRQSYGSSSSSQQLPF LQVKLTSYDRQFEQIGCPFVIPLGKIYESKTQEGQEVDLPTNADIYEYCFYYMLRYFSKD FLNTTMEYIKQNNFNIYDLFPTKQKIEEIKKRAFDRTATVDDSLNSIFYISDGENHTRFN EETLDGVIPCDDSIFVPPVERPNIYGKTSKKTIFMHIPAQHKKQLLDYNALTQFKEHPSL SQKVSSGEGCSIYQCLESFTSMEKLSANDTWYCPTCKDHVQATKKFDIWKVPDVLVVHLK RFSFTSYSRDKIDRFIDFPIQDFDLSSYVKCKENTDPKYDLFAISDHFGGLGGGHYTACA KNHLNGKWYKFDDSRTAEISNAESMKSHSNYVLFYVRKE
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NF0040310.fa Sequence name : NF0040310 Sequence length : 999 VALUES OF COMPUTED PARAMETERS Coef20 : 3.499 CoefTot : 0.253 ChDiff : -38 ZoneTo : 3 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.435 1.271 0.079 0.591 MesoH : -0.149 0.183 -0.335 0.252 MuHd_075 : 6.598 3.565 1.571 1.390 MuHd_095 : 7.199 2.676 0.659 0.234 MuHd_100 : 12.215 3.170 1.310 1.596 MuHd_105 : 15.831 6.656 2.779 2.695 Hmax_075 : 4.667 3.150 -1.544 1.657 Hmax_095 : 1.137 1.100 -1.737 1.200 Hmax_100 : 6.400 2.500 -1.490 1.740 Hmax_105 : 4.600 1.900 -1.859 1.240 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9841 0.0159 DFMC : 0.9469 0.0531
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 999 NF0040310 MASEHDDASASSSAPAQVDNNKMDDEVQSHPETNNHQDLQSVGKTGNSDHSDAMITDEDDQASSSAPTTSFSLEKFYSEF 80 QRLIQQHSMPTSEGETWYIVEGKWMGALANMESSHCSPGPIDNSLLISPESDPQNPRLKDGLQEQSDYDLVPEEIWNLFI 160 RYFGGGPAIPRKTVIVNKDSIRKTYTVEVYPYEISVAVVTNENVNELDWVDYEFSKNDTIDEVFEKVKRDFNLQNKECKL 240 WKAIMDSPSEEVNVSILRDETLENLLERKVGQRFIIEVGPKWSIDTSSLEESHANAMRTASNSRIQITGKTAQERRKMSY 320 ETPGVCGLANLGNTCFMNSGLQCLTHTPVFYEYFVNDHYVKEINKTNVLGMGGAMAIAFGNLMKEMWSGEHSYVSPVEFK 400 RVIGKYAPQFAGYQQQDSQELISFLLDGLHEDLNRVKDKPSTTPVEAKGREDAIVAKESWETHKLRNNSIIVDKFQGQLK 480 STLHCPKCDNVSITFDPFMYLTLPIPVEKNRKISFLVFLNNTYPDEIEQSVENDNTKISNMPIKISCIVNKHGSVSELRD 560 AVLDQLSLNPKEDHDRCLIYEIFNNRVYKFLSDHDPISGILDNDTLHCQIMPKISDLKYNEWVFTGKSFERLLSLPPNVH 640 ALYSSRQSYGSSSSSQQLPFLQVKLTSYDRQFEQIGCPFVIPLGKIYESKTQEGQEVDLPTNADIYEYCFYYMLRYFSKD 720 FLNTTMEYIKQNNFNIYDLFPTKQKIEEIKKRAFDRTATVDDSLNSIFYISDGENHTRFNEETLDGVIPCDDSIFVPPVE 800 RPNIYGKTSKKTIFMHIPAQHKKQLLDYNALTQFKEHPSLSQKVSSGEGCSIYQCLESFTSMEKLSANDTWYCPTCKDHV 880 QATKKFDIWKVPDVLVVHLKRFSFTSYSRDKIDRFIDFPIQDFDLSSYVKCKENTDPKYDLFAISDHFGGLGGGHYTACA 960 KNHLNGKWYKFDDSRTAEISNAESMKSHSNYVLFYVRKE 1040 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 ................................................................................ 880 ................................................................................ 960 ....................................... 1040 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NF0040310 22 AQVDNNK|MD 0.072 . NF0040310 44 DLQSVGK|TG 0.060 . NF0040310 75 TSFSLEK|FY 0.084 . NF0040310 82 FYSEFQR|LI 0.105 . NF0040310 103 WYIVEGK|WM 0.080 . NF0040310 137 SDPQNPR|LK 0.094 . NF0040310 139 PQNPRLK|DG 0.074 . NF0040310 161 IWNLFIR|YF 0.178 . NF0040310 171 GGPAIPR|KT 0.083 . NF0040310 172 GPAIPRK|TV 0.137 . NF0040310 178 KTVIVNK|DS 0.076 . NF0040310 182 VNKDSIR|KT 0.110 . NF0040310 183 NKDSIRK|TY 0.070 . NF0040310 216 VDYEFSK|ND 0.061 . NF0040310 226 IDEVFEK|VK 0.061 . NF0040310 228 EVFEKVK|RD 0.059 . NF0040310 229 VFEKVKR|DF 0.168 . NF0040310 236 DFNLQNK|EC 0.055 . NF0040310 239 LQNKECK|LW 0.081 . NF0040310 242 KECKLWK|AI 0.079 . NF0040310 258 VNVSILR|DE 0.072 . NF0040310 268 LENLLER|KV 0.157 . NF0040310 269 ENLLERK|VG 0.062 . NF0040310 273 ERKVGQR|FI 0.136 . NF0040310 281 IIEVGPK|WS 0.060 . NF0040310 298 SHANAMR|TA 0.157 . NF0040310 304 RTASNSR|IQ 0.089 . NF0040310 310 RIQITGK|TA 0.073 . NF0040310 315 GKTAQER|RK 0.091 . NF0040310 316 KTAQERR|KM 0.170 . NF0040310 317 TAQERRK|MS 0.093 . NF0040310 361 VNDHYVK|EI 0.060 . NF0040310 365 YVKEINK|TN 0.056 . NF0040310 384 AFGNLMK|EM 0.074 . NF0040310 400 VSPVEFK|RV 0.070 . NF0040310 401 SPVEFKR|VI 0.353 . NF0040310 405 FKRVIGK|YA 0.083 . NF0040310 435 LHEDLNR|VK 0.073 . NF0040310 437 EDLNRVK|DK 0.061 . NF0040310 439 LNRVKDK|PS 0.081 . NF0040310 448 TTPVEAK|GR 0.092 . NF0040310 450 PVEAKGR|ED 0.083 . NF0040310 457 EDAIVAK|ES 0.067 . NF0040310 464 ESWETHK|LR 0.060 . NF0040310 466 WETHKLR|NN 0.128 . NF0040310 474 NSIIVDK|FQ 0.082 . NF0040310 480 KFQGQLK|ST 0.078 . NF0040310 487 STLHCPK|CD 0.063 . NF0040310 509 LPIPVEK|NR 0.061 . NF0040310 511 IPVEKNR|KI 0.105 . NF0040310 512 PVEKNRK|IS 0.071 . NF0040310 537 VENDNTK|IS 0.062 . NF0040310 544 ISNMPIK|IS 0.085 . NF0040310 551 ISCIVNK|HG 0.081 . NF0040310 559 GSVSELR|DA 0.097 . NF0040310 571 QLSLNPK|ED 0.064 . NF0040310 576 PKEDHDR|CL 0.098 . NF0040310 586 YEIFNNR|VY 0.064 . NF0040310 589 FNNRVYK|FL 0.339 . NF0040310 613 HCQIMPK|IS 0.066 . NF0040310 618 PKISDLK|YN 0.075 . NF0040310 627 EWVFTGK|SF 0.083 . NF0040310 631 TGKSFER|LL 0.087 . NF0040310 646 HALYSSR|QS 0.084 . NF0040310 664 LPFLQVK|LT 0.067 . NF0040310 670 KLTSYDR|QF 0.094 . NF0040310 685 FVIPLGK|IY 0.064 . NF0040310 690 GKIYESK|TQ 0.081 . NF0040310 715 CFYYMLR|YF 0.100 . NF0040310 719 MLRYFSK|DF 0.073 . NF0040310 730 TTMEYIK|QN 0.062 . NF0040310 743 YDLFPTK|QK 0.060 . NF0040310 745 LFPTKQK|IE 0.062 . NF0040310 750 QKIEEIK|KR 0.060 . NF0040310 751 KIEEIKK|RA 0.099 . NF0040310 752 IEEIKKR|AF 0.218 . NF0040310 756 KKRAFDR|TA 0.112 . NF0040310 778 DGENHTR|FN 0.136 . NF0040310 801 FVPPVER|PN 0.076 . NF0040310 807 RPNIYGK|TS 0.086 . NF0040310 810 IYGKTSK|KT 0.060 . NF0040310 811 YGKTSKK|TI 0.113 . NF0040310 822 HIPAQHK|KQ 0.053 . NF0040310 823 IPAQHKK|QL 0.134 . NF0040310 835 NALTQFK|EH 0.052 . NF0040310 843 HPSLSQK|VS 0.086 . NF0040310 864 SFTSMEK|LS 0.051 . NF0040310 877 WYCPTCK|DH 0.069 . NF0040310 884 DHVQATK|KF 0.059 . NF0040310 885 HVQATKK|FD 0.128 . NF0040310 890 KKFDIWK|VP 0.066 . NF0040310 900 VLVVHLK|RF 0.058 . NF0040310 901 LVVHLKR|FS 0.186 . NF0040310 909 SFTSYSR|DK 0.088 . NF0040310 911 TSYSRDK|ID 0.062 . NF0040310 914 SRDKIDR|FI 0.134 . NF0040310 930 DLSSYVK|CK 0.064 . NF0040310 932 SSYVKCK|EN 0.074 . NF0040310 938 KENTDPK|YD 0.066 . NF0040310 961 HYTACAK|NH 0.056 . NF0040310 967 KNHLNGK|WY 0.060 . NF0040310 970 LNGKWYK|FD 0.073 . NF0040310 975 YKFDDSR|TA 0.101 . NF0040310 986 SNAESMK|SH 0.100 . NF0040310 997 YVLFYVR|KE 0.067 . NF0040310 998 VLFYVRK|E- 0.085 . ____________________________^_________________

  • Fasta :-

    >NF0040310 ATGGCTTCTGAACACGACGACGCTTCTGCTTCTTCCTCTGCTCCTGCACAAGTTGATAAC AACAAGATGGATGATGAAGTGCAAAGCCATCCAGAGACAAACAACCATCAAGATTTGCAG AGTGTTGGAAAAACGGGAAATTCTGATCATTCGGATGCCATGATTACCGACGAAGATGAT CAAGCATCATCATCAGCACCAACCACTTCCTTCTCTCTTGAAAAGTTTTACAGCGAATTC CAAAGATTAATACAACAACATTCCATGCCAACAAGTGAGGGCGAAACTTGGTACATTGTA GAGGGAAAGTGGATGGGTGCTTTGGCCAATATGGAATCTTCTCACTGCTCTCCCGGACCT ATCGATAATAGTCTCTTGATTTCTCCAGAGAGTGATCCACAAAACCCTCGGCTCAAAGAT GGTCTACAAGAACAATCAGATTATGATCTTGTTCCAGAAGAAATCTGGAATTTATTTATT AGATACTTTGGAGGTGGCCCAGCTATTCCCAGAAAGACAGTCATTGTCAACAAGGATTCC ATCAGAAAGACATATACAGTGGAAGTTTATCCATACGAAATTTCAGTTGCTGTAGTTACA AACGAAAATGTCAACGAACTAGATTGGGTTGACTATGAATTCTCAAAGAATGACACCATT GATGAGGTGTTTGAAAAAGTGAAGAGAGACTTCAATTTGCAAAACAAGGAGTGTAAACTA TGGAAGGCAATTATGGATTCTCCATCTGAAGAAGTTAATGTATCTATTCTCAGAGATGAA ACGTTAGAAAACTTGTTGGAACGCAAAGTCGGCCAGAGATTCATTATTGAAGTTGGACCG AAATGGTCAATCGATACATCTTCACTCGAAGAATCACATGCCAATGCTATGAGAACAGCC AGTAACTCCCGTATTCAAATTACTGGAAAAACTGCCCAAGAAAGAAGAAAAATGAGTTAT GAAACTCCAGGAGTTTGTGGCCTAGCAAATCTTGGTAACACTTGCTTTATGAACAGCGGT TTGCAATGTCTTACACATACACCAGTTTTCTACGAGTATTTTGTTAATGATCACTATGTG AAAGAAATTAACAAAACAAATGTTTTGGGTATGGGAGGAGCCATGGCAATCGCTTTTGGA AATTTAATGAAGGAAATGTGGTCTGGTGAACATTCCTATGTTTCTCCTGTTGAATTTAAA CGTGTTATTGGAAAGTATGCCCCTCAGTTTGCAGGCTATCAACAACAAGACTCCCAAGAG TTGATTTCCTTCTTACTGGATGGACTTCATGAAGATTTGAACAGAGTTAAGGATAAGCCA TCAACAACTCCAGTTGAAGCAAAAGGAAGAGAGGATGCCATTGTTGCAAAAGAGTCATGG GAGACTCACAAACTCCGTAATAATTCAATCATTGTGGACAAATTCCAAGGCCAATTGAAA TCAACTCTTCACTGTCCAAAGTGTGACAATGTATCGATTACATTTGATCCCTTCATGTAT TTAACATTGCCCATTCCAGTAGAAAAAAACAGAAAGATTTCATTTTTAGTGTTTCTAAAT AACACTTACCCAGATGAAATCGAGCAATCGGTAGAAAATGATAACACCAAGATAAGCAAC ATGCCAATCAAAATATCATGCATTGTTAACAAACATGGATCTGTTTCAGAGCTTAGAGAC GCTGTTTTAGATCAATTAAGCCTCAATCCCAAAGAAGATCATGATAGATGTCTTATTTAC GAAATATTTAATAATAGGGTCTACAAATTCCTTTCCGATCATGATCCAATTAGTGGAATT TTGGACAATGATACATTACATTGCCAAATTATGCCAAAGATTTCAGATTTGAAATATAAC GAATGGGTTTTTACTGGAAAATCTTTTGAAAGATTGCTCTCTCTACCACCTAACGTCCAT GCACTATATTCTAGTAGACAATCATATGGATCTTCCAGCTCCTCTCAGCAATTACCATTC TTACAAGTTAAGCTTACTTCTTATGACAGACAATTCGAGCAAATTGGTTGTCCTTTTGTA ATTCCTTTGGGAAAAATATACGAGAGTAAGACACAAGAAGGACAAGAAGTGGACCTTCCA ACTAATGCAGACATTTATGAGTACTGCTTCTATTACATGCTTCGCTATTTCTCAAAGGAT TTTCTTAACACCACTATGGAATATATCAAGCAGAACAATTTTAACATTTATGATCTATTT CCAACCAAACAAAAGATTGAAGAAATCAAAAAACGTGCCTTTGACAGAACAGCAACTGTT GATGACTCCTTGAACTCAATCTTTTATATATCCGACGGAGAGAATCATACTCGTTTTAAT GAGGAAACTCTTGATGGTGTCATTCCATGTGATGATTCCATATTTGTTCCACCAGTTGAG CGACCAAATATTTATGGAAAGACGTCTAAAAAAACCATTTTCATGCACATTCCTGCTCAA CACAAGAAACAGTTACTTGACTACAATGCTCTGACACAATTCAAAGAGCATCCATCTTTA AGCCAAAAAGTAAGCAGTGGCGAGGGTTGCTCAATTTATCAATGTTTAGAATCCTTTACA AGCATGGAAAAACTCAGCGCAAACGATACATGGTATTGTCCAACTTGCAAAGATCACGTT CAAGCAACTAAAAAGTTTGACATTTGGAAAGTGCCAGACGTATTGGTTGTGCACTTGAAA CGGTTCTCGTTCACTAGTTACAGTAGAGATAAGATTGACCGTTTCATTGATTTCCCAATC CAAGATTTTGATTTGTCCAGTTATGTGAAATGCAAGGAAAACACAGATCCCAAGTATGAC TTGTTCGCAATTTCTGATCACTTTGGGGGCTTGGGTGGTGGCCATTACACTGCATGTGCA AAGAATCATTTAAATGGAAAATGGTACAAATTCGATGACAGTCGCACTGCTGAAATTAGC AACGCAGAGTCTATGAAGTCTCACAGCAACTATGTATTGTTCTATGTTCGAAAAGAGTAA
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  • Fasta :-

    MASEHDDASASSSAPAQVDNNKMDDEVQSHPETNNHQDLQSVGKTGNSDHSDAMITDEDD QASSSAPTTSFSLEKFYSEFQRLIQQHSMPTSEGETWYIVEGKWMGALANMESSHCSPGP IDNSLLISPESDPQNPRLKDGLQEQSDYDLVPEEIWNLFIRYFGGGPAIPRKTVIVNKDS IRKTYTVEVYPYEISVAVVTNENVNELDWVDYEFSKNDTIDEVFEKVKRDFNLQNKECKL WKAIMDSPSEEVNVSILRDETLENLLERKVGQRFIIEVGPKWSIDTSSLEESHANAMRTA SNSRIQITGKTAQERRKMSYETPGVCGLANLGNTCFMNSGLQCLTHTPVFYEYFVNDHYV KEINKTNVLGMGGAMAIAFGNLMKEMWSGEHSYVSPVEFKRVIGKYAPQFAGYQQQDSQE LISFLLDGLHEDLNRVKDKPSTTPVEAKGREDAIVAKESWETHKLRNNSIIVDKFQGQLK STLHCPKCDNVSITFDPFMYLTLPIPVEKNRKISFLVFLNNTYPDEIEQSVENDNTKISN MPIKISCIVNKHGSVSELRDAVLDQLSLNPKEDHDRCLIYEIFNNRVYKFLSDHDPISGI LDNDTLHCQIMPKISDLKYNEWVFTGKSFERLLSLPPNVHALYSSRQSYGSSSSSQQLPF LQVKLTSYDRQFEQIGCPFVIPLGKIYESKTQEGQEVDLPTNADIYEYCFYYMLRYFSKD FLNTTMEYIKQNNFNIYDLFPTKQKIEEIKKRAFDRTATVDDSLNSIFYISDGENHTRFN EETLDGVIPCDDSIFVPPVERPNIYGKTSKKTIFMHIPAQHKKQLLDYNALTQFKEHPSL SQKVSSGEGCSIYQCLESFTSMEKLSANDTWYCPTCKDHVQATKKFDIWKVPDVLVVHLK RFSFTSYSRDKIDRFIDFPIQDFDLSSYVKCKENTDPKYDLFAISDHFGGLGGGHYTACA KNHLNGKWYKFDDSRTAEISNAESMKSHSNYVLFYVRKE

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IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
NF0040310319 SRRKMSYETP0.995unspNF0040310319 SRRKMSYETP0.995unspNF0040310319 SRRKMSYETP0.995unspNF0040310395 SHSYVSPVEF0.995unspNF0040310459 SVAKESWETH0.994unspNF0040310648 SSSRQSYGSS0.995unspNF0040310809 SYGKTSKKTI0.991unspNF0040310984 SSNAESMKSH0.995unspNF0040310247 SAIMDSPSEE0.994unspNF0040310288 SIDTSSLEES0.995unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India