NF0044530 | mitochondrial intermediate peptidase-like

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0004222      

  • Computed_GO_Functions:  metalloendopeptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
NF0044530mTP0.2628180.0003380.736844CS pos: 49-50. IVS-SN. Pr: 0.1030
No Results

  • Fasta :-

    >NF0044530 MISVWKFALSKAAYKPSTFSQTIPAVSNSLLNNKNTTNHLLFNNAGIVSSNTIIRTKKDS KTDKKKADALRRTQQKEHQKKLEQKKLELEQRSKERLAAKRASKDVSELTKQKPPSLEKL YPKKKISAKYIAETAKSPSYLNEFVYTKKNVDVSKSGEDTGFFGLKIFKDATSMRDSLVI AKAKVDDLVKSIENGENVSASVFELNKLRFEYSTALETFAKLHPFEDLAALALGISDNFS QFVSQRALSNEKFYRALKQVETSLTVPVVSESRNLYASADVNRDKFTEAKDAFEKAVKDL TDYIENNSISKVRGGMKIYELNPIHYESMKKEVAKKKKLVVINLEKDLDAILTNVTEESL RSGLYEEAVRKFMTGSDDNQFNSLLSTAIDAANAFAKLLGYPSFVELKAASCNMGRGNIP KLDDVIQIVGELRDKLDIKREVEKLSELKITRMNDPVLKKCYYNKTKQTPEELKLFTPGF DIKQLSNLYYNRIRVNYLPADVENYLSLTNCLDALSKTLASDLFGVELVPEKLAPSETWS PLNIKRLNVVSQGKVVGKIYLDLFDREKTFNYDHYSYDKAKFYPSQGEDSTKSAVIQMYL RDHIYSFPNSLTIKQFRSLSGTMGQALFYVLHETSAAALEVNLLSNVIRKVFERLPQQES FLSAHLCHKGSRQPIPEEYAAQIASTPREFPLNLLQQLVYSVYEMEVFKPIDATQSTPIE ILTSIESRFCKPYTQLVPNLSFYSKSLFNLKNQPLYLDLYAEVCAAHIAATCLPKDSLSK FSSLLKNVLTTEASTQPLDSVQRLLGANKPDVSYFIKEIQQQ
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NF0044530.fa Sequence name : NF0044530 Sequence length : 822 VALUES OF COMPUTED PARAMETERS Coef20 : 4.478 CoefTot : -0.711 ChDiff : 18 ZoneTo : 58 KR : 7 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.665 1.288 0.065 0.458 MesoH : -0.531 0.236 -0.362 0.181 MuHd_075 : 35.366 28.080 11.402 8.028 MuHd_095 : 28.191 24.448 8.262 6.571 MuHd_100 : 28.669 20.590 7.774 5.787 MuHd_105 : 28.339 23.925 9.691 7.033 Hmax_075 : 13.650 13.300 0.688 5.285 Hmax_095 : 14.200 17.600 2.558 5.840 Hmax_100 : 14.200 10.300 2.003 4.560 Hmax_105 : 14.467 9.800 2.569 3.491 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.0283 0.9717 DFMC : 0.0498 0.9502 This protein is probably imported in chloroplast. f(Ser) = 0.1379 f(Arg) = 0.0172 CMi = 1.46520 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 822 NF0044530 MISVWKFALSKAAYKPSTFSQTIPAVSNSLLNNKNTTNHLLFNNAGIVSSNTIIRTKKDSKTDKKKADALRRTQQKEHQK 80 KLEQKKLELEQRSKERLAAKRASKDVSELTKQKPPSLEKLYPKKKISAKYIAETAKSPSYLNEFVYTKKNVDVSKSGEDT 160 GFFGLKIFKDATSMRDSLVIAKAKVDDLVKSIENGENVSASVFELNKLRFEYSTALETFAKLHPFEDLAALALGISDNFS 240 QFVSQRALSNEKFYRALKQVETSLTVPVVSESRNLYASADVNRDKFTEAKDAFEKAVKDLTDYIENNSISKVRGGMKIYE 320 LNPIHYESMKKEVAKKKKLVVINLEKDLDAILTNVTEESLRSGLYEEAVRKFMTGSDDNQFNSLLSTAIDAANAFAKLLG 400 YPSFVELKAASCNMGRGNIPKLDDVIQIVGELRDKLDIKREVEKLSELKITRMNDPVLKKCYYNKTKQTPEELKLFTPGF 480 DIKQLSNLYYNRIRVNYLPADVENYLSLTNCLDALSKTLASDLFGVELVPEKLAPSETWSPLNIKRLNVVSQGKVVGKIY 560 LDLFDREKTFNYDHYSYDKAKFYPSQGEDSTKSAVIQMYLRDHIYSFPNSLTIKQFRSLSGTMGQALFYVLHETSAAALE 640 VNLLSNVIRKVFERLPQQESFLSAHLCHKGSRQPIPEEYAAQIASTPREFPLNLLQQLVYSVYEMEVFKPIDATQSTPIE 720 ILTSIESRFCKPYTQLVPNLSFYSKSLFNLKNQPLYLDLYAEVCAAHIAATCLPKDSLSKFSSLLKNVLTTEASTQPLDS 800 VQRLLGANKPDVSYFIKEIQQQ 880 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 ...................... 880 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NF0044530 6 -MISVWK|FA 0.066 . NF0044530 11 WKFALSK|AA 0.062 . NF0044530 15 LSKAAYK|PS 0.064 . NF0044530 34 NSLLNNK|NT 0.059 . NF0044530 55 SSNTIIR|TK 0.107 . NF0044530 57 NTIIRTK|KD 0.061 . NF0044530 58 TIIRTKK|DS 0.373 . NF0044530 61 RTKKDSK|TD 0.060 . NF0044530 64 KDSKTDK|KK 0.082 . NF0044530 65 DSKTDKK|KA 0.141 . NF0044530 66 SKTDKKK|AD 0.102 . NF0044530 71 KKADALR|RT 0.142 . NF0044530 72 KADALRR|TQ 0.106 . NF0044530 76 LRRTQQK|EH 0.083 . NF0044530 80 QQKEHQK|KL 0.073 . NF0044530 81 QKEHQKK|LE 0.116 . NF0044530 85 QKKLEQK|KL 0.076 . NF0044530 86 KKLEQKK|LE 0.086 . NF0044530 92 KLELEQR|SK 0.114 . NF0044530 94 ELEQRSK|ER 0.057 . NF0044530 96 EQRSKER|LA 0.092 . NF0044530 100 KERLAAK|RA 0.078 . NF0044530 101 ERLAAKR|AS 0.169 . NF0044530 104 AAKRASK|DV 0.287 . NF0044530 111 DVSELTK|QK 0.068 . NF0044530 113 SELTKQK|PP 0.059 . NF0044530 119 KPPSLEK|LY 0.057 . NF0044530 123 LEKLYPK|KK 0.061 . NF0044530 124 EKLYPKK|KI 0.118 . NF0044530 125 KLYPKKK|IS 0.116 . NF0044530 129 KKKISAK|YI 0.083 . NF0044530 136 YIAETAK|SP 0.086 . NF0044530 148 NEFVYTK|KN 0.059 . NF0044530 149 EFVYTKK|NV 0.122 . NF0044530 155 KNVDVSK|SG 0.101 . NF0044530 166 TGFFGLK|IF 0.071 . NF0044530 169 FGLKIFK|DA 0.074 . NF0044530 175 KDATSMR|DS 0.124 . NF0044530 182 DSLVIAK|AK 0.061 . NF0044530 184 LVIAKAK|VD 0.065 . NF0044530 190 KVDDLVK|SI 0.095 . NF0044530 207 SVFELNK|LR 0.054 . NF0044530 209 FELNKLR|FE 0.071 . NF0044530 221 ALETFAK|LH 0.058 . NF0044530 246 SQFVSQR|AL 0.118 . NF0044530 252 RALSNEK|FY 0.060 . NF0044530 255 SNEKFYR|AL 0.204 . NF0044530 258 KFYRALK|QV 0.237 . NF0044530 273 PVVSESR|NL 0.074 . NF0044530 283 ASADVNR|DK 0.143 . NF0044530 285 ADVNRDK|FT 0.085 . NF0044530 290 DKFTEAK|DA 0.083 . NF0044530 295 AKDAFEK|AV 0.075 . NF0044530 298 AFEKAVK|DL 0.072 . NF0044530 311 ENNSISK|VR 0.061 . NF0044530 313 NSISKVR|GG 0.109 . NF0044530 317 KVRGGMK|IY 0.064 . NF0044530 330 IHYESMK|KE 0.061 . NF0044530 331 HYESMKK|EV 0.117 . NF0044530 335 MKKEVAK|KK 0.073 . NF0044530 336 KKEVAKK|KK 0.100 . NF0044530 337 KEVAKKK|KL 0.104 . NF0044530 338 EVAKKKK|LV 0.155 . NF0044530 346 VVINLEK|DL 0.078 . NF0044530 361 VTEESLR|SG 0.088 . NF0044530 370 LYEEAVR|KF 0.075 . NF0044530 371 YEEAVRK|FM 0.091 . NF0044530 397 AANAFAK|LL 0.079 . NF0044530 408 PSFVELK|AA 0.071 . NF0044530 416 ASCNMGR|GN 0.117 . NF0044530 421 GRGNIPK|LD 0.078 . NF0044530 433 QIVGELR|DK 0.091 . NF0044530 435 VGELRDK|LD 0.057 . NF0044530 439 RDKLDIK|RE 0.059 . NF0044530 440 DKLDIKR|EV 0.198 . NF0044530 444 IKREVEK|LS 0.071 . NF0044530 449 EKLSELK|IT 0.059 . NF0044530 452 SELKITR|MN 0.104 . NF0044530 459 MNDPVLK|KC 0.057 . NF0044530 460 NDPVLKK|CY 0.096 . NF0044530 465 KKCYYNK|TK 0.064 . NF0044530 467 CYYNKTK|QT 0.074 . NF0044530 474 QTPEELK|LF 0.063 . NF0044530 483 TPGFDIK|QL 0.071 . NF0044530 492 SNLYYNR|IR 0.080 . NF0044530 494 LYYNRIR|VN 0.069 . NF0044530 517 CLDALSK|TL 0.061 . NF0044530 532 VELVPEK|LA 0.058 . NF0044530 545 WSPLNIK|RL 0.060 . NF0044530 546 SPLNIKR|LN 0.153 . NF0044530 554 NVVSQGK|VV 0.081 . NF0044530 558 QGKVVGK|IY 0.069 . NF0044530 566 YLDLFDR|EK 0.071 . NF0044530 568 DLFDREK|TF 0.055 . NF0044530 579 DHYSYDK|AK 0.055 . NF0044530 581 YSYDKAK|FY 0.088 . NF0044530 592 QGEDSTK|SA 0.092 . NF0044530 601 VIQMYLR|DH 0.092 . NF0044530 614 PNSLTIK|QF 0.068 . NF0044530 617 LTIKQFR|SL 0.207 . NF0044530 649 LLSNVIR|KV 0.195 . NF0044530 650 LSNVIRK|VF 0.105 . NF0044530 654 IRKVFER|LP 0.096 . NF0044530 669 SAHLCHK|GS 0.071 . NF0044530 672 LCHKGSR|QP 0.103 . NF0044530 688 QIASTPR|EF 0.085 . NF0044530 709 YEMEVFK|PI 0.078 . NF0044530 728 LTSIESR|FC 0.118 . NF0044530 731 IESRFCK|PY 0.213 . NF0044530 745 NLSFYSK|SL 0.096 . NF0044530 751 KSLFNLK|NQ 0.055 . NF0044530 775 AATCLPK|DS 0.068 . NF0044530 780 PKDSLSK|FS 0.060 . NF0044530 786 KFSSLLK|NV 0.077 . NF0044530 803 PLDSVQR|LL 0.098 . NF0044530 809 RLLGANK|PD 0.054 . NF0044530 817 DVSYFIK|EI 0.085 . ____________________________^_________________

  • Fasta :-

    >NF0044530 ATGATTTCCGTATGGAAGTTTGCCCTCTCCAAGGCTGCCTATAAGCCTTCAACATTTTCT CAAACAATTCCAGCGGTCTCTAATTCTCTTTTGAACAACAAGAACACAACAAATCATCTT CTGTTCAATAACGCCGGCATTGTTTCATCCAATACAATCATCAGAACAAAAAAAGACAGC AAGACTGACAAAAAGAAGGCCGATGCACTCAGACGAACCCAACAAAAAGAACACCAAAAG AAATTGGAACAAAAGAAGTTGGAATTGGAGCAAAGAAGTAAGGAAAGGCTAGCTGCTAAA CGAGCATCAAAGGATGTCTCCGAACTCACCAAACAAAAACCACCATCACTTGAAAAACTC TACCCAAAGAAGAAAATTTCAGCAAAATATATTGCAGAAACAGCCAAATCTCCATCATAT TTGAATGAATTTGTGTACACAAAGAAGAATGTTGATGTATCTAAAAGTGGTGAAGATACA GGATTCTTTGGGCTCAAAATTTTCAAAGATGCCACGTCAATGAGAGACTCATTAGTTATT GCCAAGGCAAAGGTTGATGATTTGGTGAAAAGCATTGAAAATGGAGAGAACGTTTCGGCC AGTGTATTCGAGTTGAACAAATTGAGATTTGAATATTCAACAGCTCTGGAAACATTTGCA AAATTACATCCATTTGAAGACTTGGCTGCTCTTGCTCTGGGAATTTCCGATAACTTTTCT CAATTTGTCTCTCAACGTGCTCTCTCCAATGAAAAATTTTATAGAGCCCTCAAACAAGTG GAAACATCCTTGACTGTTCCTGTTGTGAGTGAATCTAGAAATTTGTATGCCTCTGCTGAC GTTAATCGTGATAAATTTACTGAAGCAAAAGATGCGTTTGAGAAAGCCGTCAAAGATTTG ACCGATTACATTGAAAACAATAGTATTTCAAAAGTGAGAGGAGGAATGAAAATTTATGAA CTCAATCCAATCCATTACGAGTCAATGAAGAAGGAAGTTGCCAAGAAGAAAAAGCTTGTA GTTATTAATTTGGAGAAGGATCTTGATGCTATTTTGACTAACGTTACTGAGGAAAGTCTT AGATCAGGACTCTATGAAGAAGCTGTTAGAAAGTTCATGACAGGCTCAGATGACAACCAA TTCAATTCGTTGCTTTCAACTGCTATCGACGCTGCTAATGCTTTTGCCAAATTGCTTGGA TATCCATCTTTTGTCGAGTTGAAGGCAGCATCTTGTAATATGGGACGAGGTAATATTCCT AAATTAGATGACGTGATCCAAATTGTCGGAGAGTTGAGAGACAAGTTGGATATCAAGAGG GAAGTTGAGAAATTGTCTGAATTGAAGATTACTAGAATGAACGATCCTGTTCTCAAGAAA TGTTACTACAACAAGACAAAACAAACTCCAGAAGAATTGAAACTCTTCACCCCTGGTTTC GACATCAAACAGCTTTCCAATCTCTATTATAATCGCATAAGAGTGAACTATTTACCAGCA GATGTTGAAAATTATCTTTCATTAACCAACTGTTTGGATGCGTTGTCAAAGACTCTTGCA TCTGACTTGTTCGGTGTTGAACTTGTTCCAGAAAAGTTAGCTCCTTCAGAAACATGGTCT CCACTCAATATTAAGAGACTGAATGTGGTCTCACAAGGAAAAGTGGTCGGAAAGATATAC CTTGATCTTTTTGATAGAGAAAAGACATTCAATTATGATCATTACTCGTATGATAAGGCC AAGTTTTATCCATCTCAGGGTGAAGACTCTACAAAGAGCGCAGTGATTCAAATGTATCTG AGAGACCATATTTACAGCTTCCCTAATTCTTTGACTATTAAGCAATTTAGAAGCCTATCA GGAACCATGGGCCAAGCACTTTTCTATGTACTTCATGAAACCTCTGCTGCTGCTCTTGAG GTGAACTTGTTGTCTAATGTGATTCGTAAGGTCTTTGAAAGATTGCCACAACAAGAAAGT TTCCTTTCTGCACATCTTTGTCACAAGGGTTCAAGACAACCAATTCCAGAAGAATATGCT GCCCAAATTGCTTCCACTCCAAGAGAATTCCCACTCAATTTACTTCAACAACTCGTCTAT TCTGTCTACGAAATGGAAGTATTCAAACCAATCGACGCCACACAAAGCACTCCAATTGAA ATTCTCACAAGTATTGAATCACGTTTTTGCAAACCATACACACAACTTGTGCCTAATCTT TCCTTCTACTCGAAGAGTTTATTCAACCTCAAAAATCAGCCATTATATTTAGACCTGTAT GCTGAAGTGTGCGCTGCTCACATTGCTGCCACCTGTTTGCCAAAAGATTCTCTTTCCAAG TTCTCCTCTCTTTTAAAGAATGTTTTGACTACTGAGGCCTCCACTCAACCTCTCGACTCA GTCCAAAGATTACTAGGTGCTAATAAGCCTGATGTTTCATATTTTATTAAGGAAATTCAA CAACAATAA
  • Download Fasta

  • Fasta :-

    MISVWKFALSKAAYKPSTFSQTIPAVSNSLLNNKNTTNHLLFNNAGIVSSNTIIRTKKDS KTDKKKADALRRTQQKEHQKKLEQKKLELEQRSKERLAAKRASKDVSELTKQKPPSLEKL YPKKKISAKYIAETAKSPSYLNEFVYTKKNVDVSKSGEDTGFFGLKIFKDATSMRDSLVI AKAKVDDLVKSIENGENVSASVFELNKLRFEYSTALETFAKLHPFEDLAALALGISDNFS QFVSQRALSNEKFYRALKQVETSLTVPVVSESRNLYASADVNRDKFTEAKDAFEKAVKDL TDYIENNSISKVRGGMKIYELNPIHYESMKKEVAKKKKLVVINLEKDLDAILTNVTEESL RSGLYEEAVRKFMTGSDDNQFNSLLSTAIDAANAFAKLLGYPSFVELKAASCNMGRGNIP KLDDVIQIVGELRDKLDIKREVEKLSELKITRMNDPVLKKCYYNKTKQTPEELKLFTPGF DIKQLSNLYYNRIRVNYLPADVENYLSLTNCLDALSKTLASDLFGVELVPEKLAPSETWS PLNIKRLNVVSQGKVVGKIYLDLFDREKTFNYDHYSYDKAKFYPSQGEDSTKSAVIQMYL RDHIYSFPNSLTIKQFRSLSGTMGQALFYVLHETSAAALEVNLLSNVIRKVFERLPQQES FLSAHLCHKGSRQPIPEEYAAQIASTPREFPLNLLQQLVYSVYEMEVFKPIDATQSTPIE ILTSIESRFCKPYTQLVPNLSFYSKSLFNLKNQPLYLDLYAEVCAAHIAATCLPKDSLSK FSSLLKNVLTTEASTQPLDSVQRLLGANKPDVSYFIKEIQQQ

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
NF0044530116 SQKPPSLEKL0.994unspNF0044530116 SQKPPSLEKL0.994unspNF0044530116 SQKPPSLEKL0.994unspNF0044530154 SNVDVSKSGE0.992unspNF0044530156 SDVSKSGEDT0.998unspNF0044530173 SKDATSMRDS0.998unspNF0044530191 SDLVKSIENG0.993unspNF0044530249 SQRALSNEKF0.994unspNF0044530590 SQGEDSTKSA0.996unspNF0044530686 TQIASTPREF0.99unspNF004453060 STKKDSKTDK0.998unspNF0044530103 SAKRASKDVS0.99unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India