NF0048890 | presequence mitochondrial-like isoform x2

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0003824      GO:0046872      

  • Computed_GO_Functions:  catalytic activity      metal ion binding      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
NF0048890SP0.2078020.7912830.000915CS pos: 18-19. LLG-VY. Pr: 0.7732
No Results

  • Fasta :-

    >NF0048890 MSIQWFLFVASLIPLLLGVYLYQSGQNTLLMRSDDQKHHVEAPSLSEYIQHHDNSEWEII KSNIKLSTPPSTIHHLRHKRTKLEWFHVDHPNDHNNFFSISFRTPPQDHTGLTHILEHLV LCGSKKYPVRDAFFSMLKRSLSTYMNAWTAADMTSYPFGTQNQKDYYNLMQIYLDAVFNP LLRKLDFTQEGYRFEFQEHDNLQSNLTFKGVVYSEMQGVVGDANNYFSFELNRLLFDRFK NFTSLQHSDTISKFLKSLHSYSFNYGGKPENIIDLKYEDLDAYHKKYYSPNNALIFTYGS FSLIDHLNFVKNQQILDQFEEVMDVTSAPQDEVNKLDDQKHHSSILQQHLQSMITQSNEI IYFYGPEESIVYNPEKQLKYAMTFFTNQPANGFFEVFQMRMLDLLLLENPRGPLYQSLIE SKLAPRFLSITGFEKTDLLRKQPTFVIGVSEIGESDVSIIEETINKTLSSVIKEGFRKEY VESILNRIEISNKRVSANYGTSLMMEIPPFWCNGDSHRLEEVIDSEMNIKRLRQELEKSP TLFQDLISKYLRTDLALRVVMRPNKNQLNEFKEFEQAVLQTTQNNMSESEKKQIISHSIQ LQEYQNAEKLKDVDAILPSLTLSDIDTSILYQLDPHIQNFQIMGINVTTYEQETNGLIHL SVNVELWDGEKILLDKQLIDLLPFFTYCLTKMGTRELDKKELTEKIDMFTGGITSNLFFS PKAIPSPRTCIEKFGVNLYSEAVYEKMPIMFKLLLDIMTSPRFEDVKYLESLFEEYATSI SESLTQNGHEFSRSYSASVLNDYSLLTERLTGVSHFIFIKEFKKIHQANLAEVLQERMKL LLHSIYHHMTIAITCEHGHLQDLD
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NF0048890.fa Sequence name : NF0048890 Sequence length : 864 VALUES OF COMPUTED PARAMETERS Coef20 : 4.412 CoefTot : 0.034 ChDiff : -29 ZoneTo : 33 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.159 2.241 0.358 0.865 MesoH : -0.640 0.241 -0.435 0.240 MuHd_075 : 26.663 21.013 7.673 7.025 MuHd_095 : 14.604 16.021 4.855 3.972 MuHd_100 : 9.750 11.865 3.535 3.467 MuHd_105 : 13.315 19.067 4.600 4.815 Hmax_075 : 11.500 13.200 1.892 4.670 Hmax_095 : 13.475 19.075 2.516 6.107 Hmax_100 : 11.400 20.800 1.655 7.510 Hmax_105 : 19.950 25.400 4.603 7.810 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.5992 0.4008 DFMC : 0.7882 0.2118
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 864 NF0048890 MSIQWFLFVASLIPLLLGVYLYQSGQNTLLMRSDDQKHHVEAPSLSEYIQHHDNSEWEIIKSNIKLSTPPSTIHHLRHKR 80 TKLEWFHVDHPNDHNNFFSISFRTPPQDHTGLTHILEHLVLCGSKKYPVRDAFFSMLKRSLSTYMNAWTAADMTSYPFGT 160 QNQKDYYNLMQIYLDAVFNPLLRKLDFTQEGYRFEFQEHDNLQSNLTFKGVVYSEMQGVVGDANNYFSFELNRLLFDRFK 240 NFTSLQHSDTISKFLKSLHSYSFNYGGKPENIIDLKYEDLDAYHKKYYSPNNALIFTYGSFSLIDHLNFVKNQQILDQFE 320 EVMDVTSAPQDEVNKLDDQKHHSSILQQHLQSMITQSNEIIYFYGPEESIVYNPEKQLKYAMTFFTNQPANGFFEVFQMR 400 MLDLLLLENPRGPLYQSLIESKLAPRFLSITGFEKTDLLRKQPTFVIGVSEIGESDVSIIEETINKTLSSVIKEGFRKEY 480 VESILNRIEISNKRVSANYGTSLMMEIPPFWCNGDSHRLEEVIDSEMNIKRLRQELEKSPTLFQDLISKYLRTDLALRVV 560 MRPNKNQLNEFKEFEQAVLQTTQNNMSESEKKQIISHSIQLQEYQNAEKLKDVDAILPSLTLSDIDTSILYQLDPHIQNF 640 QIMGINVTTYEQETNGLIHLSVNVELWDGEKILLDKQLIDLLPFFTYCLTKMGTRELDKKELTEKIDMFTGGITSNLFFS 720 PKAIPSPRTCIEKFGVNLYSEAVYEKMPIMFKLLLDIMTSPRFEDVKYLESLFEEYATSISESLTQNGHEFSRSYSASVL 800 NDYSLLTERLTGVSHFIFIKEFKKIHQANLAEVLQERMKLLLHSIYHHMTIAITCEHGHLQDLD 880 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 ................................................................ 880 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NF0048890 32 QNTLLMR|SD 0.165 . NF0048890 37 MRSDDQK|HH 0.074 . NF0048890 61 SEWEIIK|SN 0.069 . NF0048890 65 IIKSNIK|LS 0.053 . NF0048890 77 STIHHLR|HK 0.150 . NF0048890 79 IHHLRHK|RT 0.063 . NF0048890 80 HHLRHKR|TK 0.440 . NF0048890 82 LRHKRTK|LE 0.078 . NF0048890 103 FFSISFR|TP 0.090 . NF0048890 125 LVLCGSK|KY 0.053 . NF0048890 126 VLCGSKK|YP 0.084 . NF0048890 130 SKKYPVR|DA 0.136 . NF0048890 138 AFFSMLK|RS 0.051 . NF0048890 139 FFSMLKR|SL 0.442 . NF0048890 164 FGTQNQK|DY 0.060 . NF0048890 183 VFNPLLR|KL 0.078 . NF0048890 184 FNPLLRK|LD 0.075 . NF0048890 193 FTQEGYR|FE 0.087 . NF0048890 209 QSNLTFK|GV 0.119 . NF0048890 233 FSFELNR|LL 0.090 . NF0048890 238 NRLLFDR|FK 0.088 . NF0048890 240 LLFDRFK|NF 0.064 . NF0048890 253 HSDTISK|FL 0.058 . NF0048890 256 TISKFLK|SL 0.111 . NF0048890 268 SFNYGGK|PE 0.063 . NF0048890 276 ENIIDLK|YE 0.058 . NF0048890 285 DLDAYHK|KY 0.053 . NF0048890 286 LDAYHKK|YY 0.184 . NF0048890 311 DHLNFVK|NQ 0.055 . NF0048890 335 PQDEVNK|LD 0.063 . NF0048890 340 NKLDDQK|HH 0.073 . NF0048890 376 IVYNPEK|QL 0.074 . NF0048890 379 NPEKQLK|YA 0.085 . NF0048890 400 FEVFQMR|ML 0.090 . NF0048890 411 LLLENPR|GP 0.067 . NF0048890 422 QSLIESK|LA 0.062 . NF0048890 426 ESKLAPR|FL 0.106 . NF0048890 435 SITGFEK|TD 0.052 . NF0048890 440 EKTDLLR|KQ 0.069 . NF0048890 441 KTDLLRK|QP 0.068 . NF0048890 466 IEETINK|TL 0.065 . NF0048890 473 TLSSVIK|EG 0.082 . NF0048890 477 VIKEGFR|KE 0.065 . NF0048890 478 IKEGFRK|EY 0.080 . NF0048890 487 VESILNR|IE 0.086 . NF0048890 493 RIEISNK|RV 0.086 . NF0048890 494 IEISNKR|VS 0.129 . NF0048890 518 CNGDSHR|LE 0.092 . NF0048890 530 DSEMNIK|RL 0.065 . NF0048890 531 SEMNIKR|LR 0.175 . NF0048890 533 MNIKRLR|QE 0.081 . NF0048890 538 LRQELEK|SP 0.073 . NF0048890 549 FQDLISK|YL 0.061 . NF0048890 552 LISKYLR|TD 0.084 . NF0048890 558 RTDLALR|VV 0.075 . NF0048890 562 ALRVVMR|PN 0.119 . NF0048890 565 VVMRPNK|NQ 0.097 . NF0048890 572 NQLNEFK|EF 0.075 . NF0048890 591 NMSESEK|KQ 0.066 . NF0048890 592 MSESEKK|QI 0.109 . NF0048890 609 EYQNAEK|LK 0.055 . NF0048890 611 QNAEKLK|DV 0.212 . NF0048890 671 ELWDGEK|IL 0.055 . NF0048890 676 EKILLDK|QL 0.068 . NF0048890 691 FTYCLTK|MG 0.062 . NF0048890 695 LTKMGTR|EL 0.107 . NF0048890 699 GTRELDK|KE 0.058 . NF0048890 700 TRELDKK|EL 0.154 . NF0048890 705 KKELTEK|ID 0.059 . NF0048890 722 NLFFSPK|AI 0.066 . NF0048890 728 KAIPSPR|TC 0.103 . NF0048890 733 PRTCIEK|FG 0.060 . NF0048890 746 SEAVYEK|MP 0.059 . NF0048890 752 KMPIMFK|LL 0.061 . NF0048890 762 DIMTSPR|FE 0.097 . NF0048890 767 PRFEDVK|YL 0.074 . NF0048890 793 NGHEFSR|SY 0.182 . NF0048890 809 YSLLTER|LT 0.085 . NF0048890 820 SHFIFIK|EF 0.064 . NF0048890 823 IFIKEFK|KI 0.077 . NF0048890 824 FIKEFKK|IH 0.091 . NF0048890 837 AEVLQER|MK 0.067 . NF0048890 839 VLQERMK|LL 0.064 . ____________________________^_________________

  • Fasta :-

    >NF0048890 ATGTCAATTCAATGGTTCTTATTTGTCGCTTCTCTAATTCCACTGTTGCTTGGTGTCTAT CTCTACCAATCTGGTCAAAACACATTACTCATGAGGTCGGATGATCAAAAACACCATGTA GAAGCTCCTTCACTTTCTGAATACATCCAACATCATGACAATTCGGAATGGGAAATTATT AAATCAAATATTAAATTATCGACTCCTCCCTCCACCATTCATCACCTCCGTCATAAAAGA ACAAAACTCGAATGGTTTCATGTCGATCATCCCAATGACCACAATAATTTCTTTTCAATT TCATTTCGAACACCTCCTCAAGATCATACTGGATTGACTCATATTTTAGAACATTTAGTA TTATGTGGATCGAAGAAATATCCTGTGCGAGATGCTTTCTTTTCCATGTTAAAAAGATCC TTATCCACCTATATGAATGCTTGGACTGCGGCTGATATGACTTCGTATCCATTCGGAACA CAAAATCAAAAAGATTATTATAATTTAATGCAAATTTATTTGGATGCAGTGTTTAATCCA TTGTTACGAAAATTGGATTTCACACAAGAAGGATACAGATTTGAATTTCAAGAACATGAT AATCTTCAATCAAATTTAACATTCAAAGGAGTTGTCTATAGTGAAATGCAAGGAGTTGTG GGAGATGCCAATAATTATTTTTCATTTGAATTGAATCGATTACTATTTGATCGATTCAAA AATTTCACATCACTACAGCATTCTGACACTATTTCTAAATTTCTAAAATCTCTCCACAGT TATTCTTTCAATTATGGAGGAAAACCAGAAAATATTATTGATTTGAAATATGAAGATTTA GATGCCTATCATAAGAAATATTATTCTCCCAATAACGCACTAATTTTCACTTATGGAAGC TTTTCATTGATTGATCATCTCAACTTTGTGAAGAATCAACAAATTTTGGATCAATTCGAG GAAGTGATGGATGTGACGAGTGCACCTCAAGATGAGGTCAACAAACTCGACGATCAAAAA CATCATTCTTCAATATTACAACAACACCTTCAATCCATGATCACACAATCGAACGAAATT ATATATTTTTATGGACCTGAAGAATCCATTGTTTACAATCCAGAAAAACAACTCAAATAT GCCATGACATTTTTCACCAATCAACCCGCAAATGGCTTTTTTGAGGTGTTTCAAATGAGA ATGTTGGATTTATTGCTACTCGAAAATCCAAGAGGACCACTCTATCAATCACTTATTGAA TCTAAACTGGCACCTCGATTTTTATCCATTACAGGATTTGAGAAGACTGATTTGTTACGG AAACAACCGACTTTTGTGATTGGTGTTTCTGAAATTGGTGAATCAGATGTTTCAATCATT GAGGAAACTATTAACAAAACTCTTTCTTCTGTGATAAAAGAAGGGTTTAGAAAGGAATAT GTGGAATCTATTCTCAATAGAATTGAGATTAGTAATAAGAGAGTATCAGCAAATTATGGA ACATCCTTAATGATGGAAATTCCACCTTTTTGGTGTAATGGAGACAGCCATCGATTGGAA GAAGTCATTGATAGTGAAATGAATATCAAACGTCTTCGACAAGAGCTTGAAAAATCTCCA ACACTCTTCCAAGATTTAATTTCAAAATATTTGAGAACGGATTTAGCATTGAGAGTAGTC ATGAGACCAAATAAGAATCAATTAAATGAATTTAAGGAATTTGAACAAGCAGTGTTACAA ACAACACAAAACAACATGTCTGAAAGCGAAAAGAAACAAATTATTTCACATTCTATTCAA CTTCAAGAATATCAAAATGCTGAAAAATTGAAAGATGTTGATGCAATTTTACCATCTCTC ACTCTTTCGGATATTGACACCTCGATTCTGTATCAACTGGATCCTCACATTCAAAATTTT CAAATAATGGGAATTAATGTGACAACATACGAACAAGAAACAAATGGTTTGATTCACTTG AGTGTCAATGTAGAGTTGTGGGATGGAGAGAAAATTCTTTTGGACAAACAGCTGATCGAC TTGTTGCCATTTTTCACATACTGTCTAACAAAGATGGGAACTCGAGAATTAGACAAAAAA GAGCTTACAGAGAAGATTGACATGTTCACAGGAGGCATTACTTCGAATTTATTCTTTTCA CCCAAAGCAATTCCATCACCTAGGACTTGTATTGAAAAGTTTGGAGTGAATCTCTATTCG GAGGCTGTTTATGAAAAGATGCCAATCATGTTCAAGTTACTTTTAGATATAATGACATCT CCTCGTTTTGAAGATGTGAAATATTTGGAGTCATTATTTGAAGAATATGCAACTTCCATA AGCGAGAGCTTGACACAAAATGGACATGAATTTTCTAGATCATACTCTGCATCTGTCTTG AATGATTATTCTTTACTCACCGAACGGTTGACAGGAGTGTCACATTTTATATTTATTAAG GAGTTTAAGAAAATACACCAAGCCAATTTAGCAGAAGTTTTACAAGAACGCATGAAATTA CTTCTCCATTCCATTTATCATCATATGACTATTGCAATCACTTGTGAACATGGACATTTA CAAGATTTGGATTGAGACATCCAATATTTTTACAAGAATTGCACAATACCCAACTTTCTC GAACCACACACGACTCAACAACAACAACAATCCAATCACTCTTAACTTTATCCAAACGTA CAAAACAAGGAACTTTTATTGAATTGAATTTTCCTGTGAATTATGTCGCCATCAGTTTTG CAACCAACACTTCTTATTTAAAGAAAGACTTTGCTTCACTTTCTATATTTGCAGCATTTC TCTTTCCAGTGCTTCACAAAGAAATTCGTGAAAAAGAAGGAGCTTATGGTCAGAAAACAA ACATGTTCAGAGAACAAATTTTCTCTTTCTATACGTATAGAGATCCTAACACTTACAAAA CGATTGAAATATTTCGAAGAGTATTGAGTGATCTTTGTGAAAACAATTCCTCACATGCAA TCATGATGAGTGAAAAAGAACTTTTTGAATCCAAATTAAGTGTGTTAAAGAAATTGGACA CACCCATGGAACCTCATCAAAGATTTTCTTTATACTTCTTGCATGGTCTCACTGATGCAA TGAGACAACAATTTAGAAATTATTTGTTGCAAGTTGGAGTGGAAGATGTGTTACGAGCAT GCCAATTACATCTTGTCCATGTTCCTAAGAATTTGCAATACATGACCATCCTTGGATCCA AACCAAAAGAAGAAGAAGGAGTTGTGGAGTACTTTGATTTTGTTTCACTATGA
  • Download Fasta

  • Fasta :-

    MSIQWFLFVASLIPLLLGVYLYQSGQNTLLMRSDDQKHHVEAPSLSEYIQHHDNSEWEII KSNIKLSTPPSTIHHLRHKRTKLEWFHVDHPNDHNNFFSISFRTPPQDHTGLTHILEHLV LCGSKKYPVRDAFFSMLKRSLSTYMNAWTAADMTSYPFGTQNQKDYYNLMQIYLDAVFNP LLRKLDFTQEGYRFEFQEHDNLQSNLTFKGVVYSEMQGVVGDANNYFSFELNRLLFDRFK NFTSLQHSDTISKFLKSLHSYSFNYGGKPENIIDLKYEDLDAYHKKYYSPNNALIFTYGS FSLIDHLNFVKNQQILDQFEEVMDVTSAPQDEVNKLDDQKHHSSILQQHLQSMITQSNEI IYFYGPEESIVYNPEKQLKYAMTFFTNQPANGFFEVFQMRMLDLLLLENPRGPLYQSLIE SKLAPRFLSITGFEKTDLLRKQPTFVIGVSEIGESDVSIIEETINKTLSSVIKEGFRKEY VESILNRIEISNKRVSANYGTSLMMEIPPFWCNGDSHRLEEVIDSEMNIKRLRQELEKSP TLFQDLISKYLRTDLALRVVMRPNKNQLNEFKEFEQAVLQTTQNNMSESEKKQIISHSIQ LQEYQNAEKLKDVDAILPSLTLSDIDTSILYQLDPHIQNFQIMGINVTTYEQETNGLIHL SVNVELWDGEKILLDKQLIDLLPFFTYCLTKMGTRELDKKELTEKIDMFTGGITSNLFFS PKAIPSPRTCIEKFGVNLYSEAVYEKMPIMFKLLLDIMTSPRFEDVKYLESLFEEYATSI SESLTQNGHEFSRSYSASVLNDYSLLTERLTGVSHFIFIKEFKKIHQANLAEVLQERMKL LLHSIYHHMTIAITCEHGHLQDLD

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
NF0048890587 SQNNMSESEK0.995unspNF0048890587 SQNNMSESEK0.995unspNF0048890587 SQNNMSESEK0.995unspNF0048890623 SSLTLSDIDT0.993unspNF0048890302 SYGSFSLIDH0.996unspNF0048890458 SESDVSIIEE0.993unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India