NF0051410 | hypothetical protein NAEGRDRAFT 80571

UniProt_ID:

Computed_GO_Component_IDs:
Computed_GO_Components:
Computed_GO_Function_IDs: GO:1990380 GO:0004843
Computed_GO_Functions: Lys48-specific deubiquitinase activity thiol-dependent ubiquitin-specific protease activity
Computed_GO_Process_IDs:
Computed_GO_Processes:
Curated_GO_Component_IDs:
Curated_GO_Components:
Curated_GO_Function_IDs:
Curated_GO_Functions:
Curated_GO_Processes:

	_ID	Prediction	OTHER	SP	mTP	CS_Position
	NF0051410	OTHER	0.999998	0.000001	0.000001

No Results

Fasta :-
>NF0051410 MSSSSFAQSSSQHQQQSDQVHSSSDHHHHHQETTTKPLSNKTMQPPSDEGNIERYKVKRV LIGERRTPIILQNLNGPCPLIAICNLMSLRGENIGMEDYIENGFITNNNLVCILAEYMLK KFNAISKKQQTNENGQEILFQTALDHLPILKHGLDVNVQFTEGVSGFKTEKSELSVFQFF NMKLMHGWLIDPEFDVETFKALKELSYNQAVEKIVLMEELTAAEEKLRKKLESDTSTNKL TGEGVNGINVDHMMHDTNDHSAKPLTEFSTPEEMALKMSPQQKHQIINEG
Download Fasta

MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NF0051410.fa Sequence name : NF0051410 Sequence length : 290 VALUES OF COMPUTED PARAMETERS Coef20 : 3.820 CoefTot : 0.023 ChDiff : -11 ZoneTo : 17 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.871 1.206 0.156 0.502 MesoH : -0.914 0.218 -0.453 0.187 MuHd_075 : 18.567 11.253 4.831 3.146 MuHd_095 : 9.717 5.411 2.157 1.972 MuHd_100 : 12.367 6.366 3.167 2.230 MuHd_105 : 14.033 7.805 3.856 2.557 Hmax_075 : 5.600 -1.400 -1.876 0.525 Hmax_095 : 6.212 -2.188 -1.943 0.473 Hmax_100 : 3.700 -4.400 -2.357 0.030 Hmax_105 : 4.783 -1.167 -2.142 1.027 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9170 0.0830 DFMC : 0.8172 0.1828

##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 290 NF0051410 MSSSSFAQSSSQHQQQSDQVHSSSDHHHHHQETTTKPLSNKTMQPPSDEGNIERYKVKRVLIGERRTPIILQNLNGPCPL 80 IAICNLMSLRGENIGMEDYIENGFITNNNLVCILAEYMLKKFNAISKKQQTNENGQEILFQTALDHLPILKHGLDVNVQF 160 TEGVSGFKTEKSELSVFQFFNMKLMHGWLIDPEFDVETFKALKELSYNQAVEKIVLMEELTAAEEKLRKKLESDTSTNKL 240 TGEGVNGINVDHMMHDTNDHSAKPLTEFSTPEEMALKMSPQQKHQIINEG 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 .................................................. 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NF0051410 36 HQETTTK|PL 0.082 . NF0051410 41 TKPLSNK|TM 0.059 . NF0051410 54 DEGNIER|YK 0.082 . NF0051410 56 GNIERYK|VK 0.058 . NF0051410 58 IERYKVK|RV 0.095 . NF0051410 59 ERYKVKR|VL 0.313 . NF0051410 65 RVLIGER|RT 0.076 . NF0051410 66 VLIGERR|TP 0.096 . NF0051410 90 CNLMSLR|GE 0.088 . NF0051410 120 LAEYMLK|KF 0.060 . NF0051410 121 AEYMLKK|FN 0.121 . NF0051410 127 KFNAISK|KQ 0.071 . NF0051410 128 FNAISKK|QQ 0.121 . NF0051410 151 DHLPILK|HG 0.060 . NF0051410 168 EGVSGFK|TE 0.055 . NF0051410 171 SGFKTEK|SE 0.070 . NF0051410 183 FQFFNMK|LM 0.060 . NF0051410 200 FDVETFK|AL 0.058 . NF0051410 203 ETFKALK|EL 0.060 . NF0051410 213 YNQAVEK|IV 0.085 . NF0051410 226 LTAAEEK|LR 0.061 . NF0051410 228 AAEEKLR|KK 0.078 . NF0051410 229 AEEKLRK|KL 0.077 . NF0051410 230 EEKLRKK|LE 0.082 . NF0051410 239 SDTSTNK|LT 0.070 . NF0051410 263 TNDHSAK|PL 0.076 . NF0051410 277 PEEMALK|MS 0.064 . NF0051410 283 KMSPQQK|HQ 0.089 . ____________________________^_________________

Fasta :-
>NF0051410 ATGTCGTCGTCATCTTTTGCGCAATCATCATCACAACATCAACAACAATCAGATCAAGTT CATTCCTCATCGGATCATCATCATCACCACCAAGAAACAACAACAAAACCACTCTCCAAT AAAACCATGCAACCACCCTCGGATGAAGGCAATATTGAGAGATATAAAGTCAAACGAGTC TTGATCGGAGAGAGAAGAACTCCGATCATTTTGCAAAATTTAAATGGACCTTGTCCTTTG ATTGCAATTTGTAATTTAATGTCTTTGAGAGGAGAAAATATCGGAATGGAGGATTATATT GAAAATGGTTTTATTACAAATAATAATTTGGTGTGCATCTTGGCTGAATATATGCTCAAA AAGTTCAATGCCATTTCCAAGAAACAACAAACGAATGAAAACGGACAAGAGATTTTGTTT CAAACTGCTCTCGATCACTTACCGATATTAAAACATGGCTTGGATGTCAATGTGCAATTT ACGGAAGGCGTTAGTGGATTCAAAACAGAGAAATCAGAATTATCAGTATTTCAATTCTTC AATATGAAATTAATGCATGGATGGCTGATTGATCCAGAATTTGATGTCGAAACATTTAAA GCTCTCAAAGAATTGTCATACAATCAAGCAGTTGAAAAGATTGTCCTCATGGAAGAATTA ACGGCTGCTGAGGAAAAATTGAGAAAAAAATTGGAAAGTGACACCTCAACGAACAAACTC ACTGGTGAAGGAGTGAATGGTATCAATGTTGATCATATGATGCATGACACCAATGACCAC TCTGCAAAACCACTCACAGAATTTTCAACACCCGAAGAAATGGCTCTCAAAATGAGTCCC CAACAGAAACATCAAATCATCAACGAGGGGTAACCGAGGGTAGCTGATAAAACAATTCCT CGAAAATTCATCCACACAACTGACAGAATATGGTCTTAAAATGATCAATCAAAATTTAGG AGAACACAAGTTAGCAGTGCTCTTCAGAAATAATCATTTCAGTGTGATTTGTAAGATTCA AGATGCTTTACTCACACTCTGTACAGATGAGACTTTACTCAATGAAACGAATATTGTGTG GGAAAATTTATCTTCCATCAATGGAGAAAATCAACATTACTATTTGGGTGATTTCACTCC TTTCCAAATGCTTGAAACTCATTCCCAAAACTATGAATATCATAGAAATCAACAAAATCA GTCGGAATTGGTGACACAACAATTACCATCATCTCATGAAGAATCTGATTTACAATTGGC TCTACAACTTCAACAAGAAGAGGAACGGGCCTATCAGCAAGAATTGGCTCAACAAAGTCC TCGAATGCAACAACAAGCCGTACAACAAAGTCCTCGAATACAACAACGAGTTGTCGATCC AACAGCTTCACCTGGAATGGTGTCACAAAGCAGTAGTACTGGCGGTACATCATCAAACAA TCCCTATGATCGCGACCCATCCATTCCCTATGCAAACGTGTCAACCATTCGAGAAAAGAA ACATTCAACAAATCCAAATGCCAAGTATGGATCGAACAACAAGTATGCCAATCAAGCGAA CCAACTTCGAGATTTAAATACTGAACGAATGAAGCGAGAGCAGCAAATGAAAGAAGCAGA TCCTAAGGGCTATGCAAAAAAGTCTAAGGAAGCAAAAAGAAAATCTGGCGATGGCTGTAT TATTTGTTAG
Download Fasta

Fasta :-

MSSSSFAQSSSQHQQQSDQVHSSSDHHHHHQETTTKPLSNKTMQPPSDEGNIERYKVKRV LIGERRTPIILQNLNGPCPLIAICNLMSLRGENIGMEDYIENGFITNNNLVCILAEYMLK KFNAISKKQQTNENGQEILFQTALDHLPILKHGLDVNVQFTEGVSGFKTEKSELSVFQFF NMKLMHGWLIDPEFDVETFKALKELSYNQAVEKIVLMEELTAAEEKLRKKLESDTSTNKL TGEGVNGINVDHMMHDTNDHSAKPLTEFSTPEEMALKMSPQQKHQIINEG

No Results

	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore
	NF0051410	T	35	0.556	0.222	NF0051410	T	34	0.540	0.141	NF0051410	S	2	0.529	0.064	NF0051410	T	33	0.522	0.023	NF0051410	S	3	0.507	0.050

	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore
	NF0051410	T	35	0.556	0.222	NF0051410	T	34	0.540	0.141	NF0051410	S	2	0.529	0.064	NF0051410	T	33	0.522	0.023	NF0051410	S	3	0.507	0.050

	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method
	NF0051410	22 S	DQVHSSSDH	0.996	unsp	NF0051410	47 S	MQPPSDEGN	0.99	unsp

NF0051410 | hypothetical protein NAEGRDRAFT 80571

ID's

UniProt_ID:

GEO Functions

Computed_GO_Component_IDs:

Computed_GO_Components:

Computed_GO_Function_IDs: GO:1990380 GO:0004843

Computed_GO_Functions: Lys48-specific deubiquitinase activity thiol-dependent ubiquitin-specific protease activity

Computed_GO_Process_IDs:

Computed_GO_Processes:

Curated_GO_Component_IDs:

Curated_GO_Components:

Curated_GO_Function_IDs:

Curated_GO_Functions:

Curated_GO_Processes:

Subcellular Localization

Targetp

Signalp

Fasta :-

Mitoprot

ProPeptide Prediction

Sequence

Nucleotide sequence

Fasta :-

Protein sequence

Fasta :-

Domains

Structure

Post Translational Modifications

N_Linked Glycosylation

O_Linked Glycosylation

Phosphorylation

Protein-Protein Interaction

String

Literature

PubMed

Google Scholar

Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India