NF0053400 | desumoylating isopeptidase 2

UniProt_ID:

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	_ID	Prediction	OTHER	SP	mTP	CS_Position
	NF0053400	OTHER	0.999594	0.000091	0.000315

No Results

Fasta :-
>NF0053400 MVPLRESIYLTSVELPRDRIMAIVDEVSKEFNKLRYHLLDRNCNHYAKALYERILDRCGR QVKESAVPIPAYVNRSAWWGSKLKCLMPPQLLNTPVPSSAEGTEAGDEAPSFTAFQGSGR TLSGKTVTTNDKKNKGFFSSLFSKDDTKESEMKYYEKNEEKGNTLNRREKLLMAAEKRLS NKAQISSD
Download Fasta

MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NF0053400.fa Sequence name : NF0053400 Sequence length : 188 VALUES OF COMPUTED PARAMETERS Coef20 : 4.208 CoefTot : 0.004 ChDiff : 6 ZoneTo : 5 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.182 0.753 -0.210 0.249 MesoH : -0.688 -0.264 -0.458 0.075 MuHd_075 : 9.806 1.642 1.594 0.536 MuHd_095 : 32.300 11.673 7.664 4.464 MuHd_100 : 22.796 11.167 5.478 3.363 MuHd_105 : 8.797 6.990 2.528 1.664 Hmax_075 : -3.000 5.200 -1.025 2.590 Hmax_095 : 13.700 10.900 1.700 4.130 Hmax_100 : 4.700 9.000 -0.152 3.110 Hmax_105 : -0.500 7.800 -0.803 3.060 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9890 0.0110 DFMC : 0.9818 0.0182

##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 188 NF0053400 MVPLRESIYLTSVELPRDRIMAIVDEVSKEFNKLRYHLLDRNCNHYAKALYERILDRCGRQVKESAVPIPAYVNRSAWWG 80 SKLKCLMPPQLLNTPVPSSAEGTEAGDEAPSFTAFQGSGRTLSGKTVTTNDKKNKGFFSSLFSKDDTKESEMKYYEKNEE 160 KGNTLNRREKLLMAAEKRLSNKAQISSD 240 ................................................................................ 80 ................................................................................ 160 ............................ 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NF0053400 5 --MVPLR|ES 0.078 . NF0053400 17 TSVELPR|DR 0.110 . NF0053400 19 VELPRDR|IM 0.072 . NF0053400 29 IVDEVSK|EF 0.057 . NF0053400 33 VSKEFNK|LR 0.058 . NF0053400 35 KEFNKLR|YH 0.086 . NF0053400 41 RYHLLDR|NC 0.080 . NF0053400 48 NCNHYAK|AL 0.070 . NF0053400 53 AKALYER|IL 0.118 . NF0053400 57 YERILDR|CG 0.092 . NF0053400 60 ILDRCGR|QV 0.352 . NF0053400 63 RCGRQVK|ES 0.108 . NF0053400 75 IPAYVNR|SA 0.301 . NF0053400 82 SAWWGSK|LK 0.060 . NF0053400 84 WWGSKLK|CL 0.062 . NF0053400 120 AFQGSGR|TL 0.109 . NF0053400 125 GRTLSGK|TV 0.085 . NF0053400 132 TVTTNDK|KN 0.058 . NF0053400 133 VTTNDKK|NK 0.074 . NF0053400 135 TNDKKNK|GF 0.096 . NF0053400 144 FSSLFSK|DD 0.085 . NF0053400 148 FSKDDTK|ES 0.062 . NF0053400 153 TKESEMK|YY 0.087 . NF0053400 157 EMKYYEK|NE 0.065 . NF0053400 161 YEKNEEK|GN 0.062 . NF0053400 167 KGNTLNR|RE 0.074 . NF0053400 168 GNTLNRR|EK 0.097 . NF0053400 170 TLNRREK|LL 0.214 . NF0053400 177 LLMAAEK|RL 0.071 . NF0053400 178 LMAAEKR|LS 0.198 . NF0053400 182 EKRLSNK|AQ 0.069 . ____________________________^_________________

Fasta :-
>NF0053400 ATGGTTCCACTGAGAGAATCAATTTATTTGACAAGTGTAGAACTTCCAAGAGACAGAATT ATGGCTATCGTTGATGAAGTGTCAAAAGAATTCAACAAATTGCGATATCATTTGCTTGAT AGAAATTGCAACCATTATGCTAAGGCTTTGTATGAAAGAATATTAGACAGATGCGGCAGA CAGGTGAAAGAATCAGCAGTTCCTATCCCTGCATATGTCAATCGAAGTGCATGGTGGGGT TCAAAGCTGAAGTGCTTGATGCCTCCACAATTGTTAAACACACCTGTCCCCTCATCTGCC GAAGGAACTGAGGCTGGTGACGAGGCCCCTTCATTTACAGCATTTCAGGGTAGCGGCAGG ACGCTAAGTGGAAAAACTGTGACAACAAATGACAAGAAAAACAAGGGATTTTTCTCTTCT CTTTTTTCAAAAGACGATACCAAAGAATCTGAGATGAAATATTATGAGAAAAATGAAGAA AAAGGAAATACTCTAAATAGAAGAGAGAAACTGTTAATGGCTGCAGAGAAAAGACTATCC AATAAGGCACAAATATCTTCTGATTAA
Download Fasta

Fasta :-

MVPLRESIYLTSVELPRDRIMAIVDEVSKEFNKLRYHLLDRNCNHYAKALYERILDRCGR QVKESAVPIPAYVNRSAWWGSKLKCLMPPQLLNTPVPSSAEGTEAGDEAPSFTAFQGSGR TLSGKTVTTNDKKNKGFFSSLFSKDDTKESEMKYYEKNEEKGNTLNRREKLLMAAEKRLS NKAQISSD

No Results

	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore
	NF0053400	T	103	0.645	0.232	NF0053400	T	113	0.602	0.045	NF0053400	S	99	0.506	0.096	NF0053400	S	111	0.503	0.197

	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore
	NF0053400	T	103	0.645	0.232	NF0053400	T	113	0.602	0.045	NF0053400	S	99	0.506	0.096	NF0053400	S	111	0.503	0.197

	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method
	NF0053400	143 S	SSLFSKDDT	0.997	unsp	NF0053400	143 S	SSLFSKDDT	0.997	unsp	NF0053400	143 S	SSLFSKDDT	0.997	unsp	NF0053400	180 S	EKRLSNKAQ	0.997	unsp	NF0053400	28 S	VDEVSKEFN	0.99	unsp	NF0053400	99 S	PVPSSAEGT	0.997	unsp

NF0053400 | desumoylating isopeptidase 2

ID's

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Subcellular Localization

Targetp

Signalp

Fasta :-

Mitoprot

ProPeptide Prediction

Sequence

Nucleotide sequence

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Protein sequence

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Domains

Structure

Post Translational Modifications

N_Linked Glycosylation

O_Linked Glycosylation

Phosphorylation

Protein-Protein Interaction

String

Literature

PubMed

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Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India