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Computed_GO_Component_IDs:
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Computed_GO_Components:
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Computed_GO_Function_IDs: GO:0005515
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Computed_GO_Process_IDs:
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Computed_GO_Processes:
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Curated_GO_Component_IDs:
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Curated_GO_Components:
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Curated_GO_Function_IDs:
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Curated_GO_Functions:
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Curated_GO_Processes:
No Results
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Fasta :-
>NF0056250
MSETTRILSLKNVFGLNAKVKNNIWYISESCVVYPSGRCLVFHQSNGVRKIRTGSDSTEG
ISSLCLSPNRKYLAVAEKTKPLSANVKINDLKKNPPVIKLYETSNYTVKKTISHPGVGSH
EYVCIAFSQDGKYLVAQGGGPEYNLVLWSMEGKTRVVDTFCTSSVDGDPVFQCSISPDNK
TICVSGNGIFKLLTVDEREKLKVLVDGIAKRDHEPYLAHTWLDEERLIVSNANGDLFYIC
QNEFKQILPSSPSDGLSITSLIPYGTGFVCGGENGIVSIFEKSADDKEIYARSKTLRIMN
STQYKELGETYLDHKILNFNLSPSNENLVLSTSSAQIFTLNISSSDILQKEDEIKFEYLT
IPFHSKPITGIDTAIRKPIVATCSTDKTVRIWNYIDNSLNIVKHFPAEAYSIAVHPSGLH
IAVGFQDKLRFMDILGDDIREQKSFLVRNCAEVKFSNGGHYFAAAHGNVINVYNTYTLQL
VSALRGHNGKIRALQWSDDDTRVLSVGMDGAVYEYVIKTEKRTIHHTSKNVAYTSVVTDG
KNIYVCGSDNKIKGFSEGTPQLEYDLGENTLVCMEYSEGQKLIFGGMDNGVISVHSFPNL
EYIEDKIMLHSGTINRIGKSWDDTFLFTAGEDGMLGIIEIRDRDGGKAKKETKYSEEILI
SGADWEEKNATIAELQAKVAELKSDNEYEQKKKEIEFNNTLREQAKNFQLELSKKQEEIQ
SILQEKKVVTDEYEKKIDELIEKQREKIKALEQDFNERLHNSLEQIAELNREREKEKRAI
LEEAKTKEEMHMRELTDITEEYEDEIKRKEASSNALMDEKAELEKKFAEIKNQMEEDQDK
EIKILKETYEKKLLKMNESYNEAKSEANKWNDRFIALQKTLKQKMEQIEKLEEKKQRAEN
LNKQYQEDIQKMTEENKEREETIIDKEKRIFKLKRQNQELEKFRFVLEYKISTLQEQIKP
SKEEITALRRETKKMRKELEKAKEKNDRLILNIKDLELKIDGRVKEIQRLNFKVKDSDTL
LKRIRADIYKVAQLIQEPKELKEEVAKLYQTYVSEQIATQEMDFDIQKEYERQRSYLEKT
VESLKKKLVKATETSKADNKRIMNENVLLIKEINELRKEVRSLKSRLKDKDVESKIGKKN
SVENLTASAEKELPGITSLEQALKEIEMQRHKIQTLREKIEEYEAEKKALSRPISRERLP
PVIV
- Download Fasta
-
MitoProt II - v1.101
File : /home/rajan/sadaf/4480_mitoprot/test/NF0056250.fa
Sequence name : NF0056250
Sequence length : 1204
VALUES OF COMPUTED PARAMETERS
Coef20 : 4.366
CoefTot : -1.596
ChDiff : -8
ZoneTo : 55
KR : 8
DE : 2
CleavSite : 54
HYDROPHOBIC SCALE USED
GES KD GVH1 ECS
H17 : 1.576 1.094 0.326 0.555
MesoH : -0.533 0.194 -0.322 0.220
MuHd_075 : 31.391 23.806 10.046 6.599
MuHd_095 : 31.115 23.456 8.741 6.785
MuHd_100 : 29.760 25.676 8.501 7.885
MuHd_105 : 25.063 26.129 8.841 7.156
Hmax_075 : 15.983 21.467 5.510 5.612
Hmax_095 : 8.600 16.975 3.243 4.150
Hmax_100 : 9.000 21.500 3.513 4.810
Hmax_105 : 12.017 15.750 4.625 1.041
CLASS NOT-MITO MITO(/CHLORO)
DFM : 0.1180 0.8820
DFMC : 0.1654 0.8346
This protein is probably imported in mitochondria.
f(Ser) = 0.1273 f(Arg) = 0.0727 CMi = 0.74074
CMi is the Chloroplast/Mitochondria Index
It has been proposed by Von Heijne et al
(Eur J Biochem,1989, 180: 535-545)
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Fasta :-
>NF0056250
ATGTCGGAAACCACTCGCATTCTTTCCCTGAAGAATGTGTTTGGTCTCAATGCCAAAGTT
AAGAACAATATATGGTACATTAGTGAGTCTTGCGTCGTGTATCCATCGGGACGATGTCTC
GTTTTCCATCAAAGCAATGGAGTGAGAAAGATTCGAACGGGATCCGATTCAACGGAAGGT
ATCTCTTCTCTTTGCCTCTCCCCCAACAGAAAATATCTGGCTGTGGCAGAGAAGACCAAG
CCGCTCTCAGCCAACGTTAAAATTAATGATCTCAAGAAGAATCCTCCTGTCATCAAACTT
TACGAAACATCGAATTATACAGTCAAAAAAACAATATCACATCCTGGAGTAGGATCGCAT
GAATATGTTTGCATTGCATTTTCTCAGGATGGTAAATACTTGGTAGCTCAGGGAGGAGGC
CCTGAATATAACCTTGTCTTGTGGTCAATGGAGGGAAAGACCAGAGTTGTAGATACGTTT
TGTACATCATCGGTAGATGGAGATCCTGTTTTTCAGTGTTCAATTAGTCCGGATAACAAG
ACCATTTGTGTTTCAGGAAATGGTATTTTCAAGTTATTAACGGTTGACGAAAGAGAAAAA
TTGAAAGTCCTTGTCGACGGAATTGCTAAAAGAGATCATGAACCTTATCTCGCTCATACA
TGGCTCGATGAGGAACGTTTAATAGTTTCCAATGCCAATGGAGATTTGTTTTATATTTGC
CAAAATGAATTTAAACAAATACTGCCTTCGTCACCTTCTGACGGTCTCAGCATTACCTCT
CTCATTCCGTATGGCACAGGATTTGTTTGTGGAGGAGAAAATGGAATTGTTTCAATTTTC
GAAAAGTCAGCAGACGACAAGGAGATTTATGCTCGATCAAAAACATTGAGAATTATGAAT
AGCACTCAATACAAGGAACTTGGAGAGACCTACCTCGACCACAAGATTTTGAATTTCAAT
TTGAGCCCGTCCAACGAAAATCTTGTCCTATCTACGAGCTCTGCTCAAATATTTACACTC
AATATTTCAAGCTCAGATATTTTACAGAAGGAGGATGAAATCAAATTTGAATACTTGACC
ATTCCTTTCCATTCGAAACCAATCACAGGTATCGACACTGCCATCAGAAAACCCATTGTT
GCCACATGCAGCACGGACAAAACTGTTCGTATTTGGAATTATATCGATAATAGTTTGAAC
ATTGTGAAACACTTTCCTGCTGAGGCCTATTCCATTGCTGTACACCCCAGTGGTCTACAC
ATTGCAGTGGGTTTTCAAGACAAGCTTCGATTCATGGATATTTTAGGTGATGACATTAGG
GAACAAAAGTCATTCCTAGTTAGAAATTGTGCTGAGGTAAAGTTTAGCAATGGAGGACAC
TATTTCGCCGCTGCTCACGGAAACGTGATCAATGTCTACAATACGTACACTTTACAATTA
GTGTCAGCCCTCAGAGGTCACAATGGAAAAATCAGAGCACTGCAGTGGTCTGACGACGAC
ACTCGCGTATTGAGCGTTGGCATGGATGGAGCAGTCTATGAGTATGTTATCAAGACAGAA
AAAAGGACCATTCATCATACGAGTAAGAATGTGGCTTACACTTCCGTCGTTACGGATGGT
AAAAACATTTATGTATGTGGAAGTGACAACAAGATCAAGGGATTTAGTGAAGGAACCCCT
CAGCTAGAATACGATCTCGGAGAAAATACTCTTGTATGCATGGAATATTCAGAGGGTCAA
AAGCTAATCTTTGGAGGCATGGATAACGGAGTGATCTCTGTTCACTCATTTCCCAATTTA
GAATATATCGAAGACAAGATTATGCTGCATTCAGGAACTATCAATCGAATTGGAAAATCA
TGGGACGATACCTTCTTGTTTACGGCTGGAGAGGATGGCATGTTGGGAATTATTGAAATT
AGAGATCGTGATGGTGGAAAGGCCAAAAAGGAAACAAAGTATTCTGAGGAAATTCTCATT
TCAGGAGCGGATTGGGAAGAGAAAAATGCAACCATTGCTGAGCTGCAAGCAAAAGTTGCC
GAGCTCAAGTCCGACAACGAGTACGAGCAAAAAAAGAAGGAAATTGAGTTTAACAACACC
TTGAGAGAGCAAGCAAAGAATTTTCAATTGGAGCTCAGCAAAAAACAAGAAGAAATTCAA
AGTATTCTTCAAGAGAAAAAGGTCGTCACAGACGAGTATGAAAAGAAAATTGACGAGCTC
ATCGAGAAACAACGAGAAAAAATTAAGGCACTTGAGCAAGATTTCAACGAGAGGCTTCAC
AACTCGTTAGAACAGATCGCTGAGCTCAATAGAGAACGGGAAAAGGAAAAACGAGCGATA
TTAGAAGAGGCCAAAACAAAGGAAGAAATGCACATGCGAGAACTCACCGACATTACAGAA
GAATATGAAGACGAAATCAAGAGAAAAGAAGCATCATCGAATGCCCTCATGGATGAAAAG
GCTGAACTTGAAAAGAAATTTGCTGAAATTAAGAATCAAATGGAAGAGGATCAAGATAAG
GAAATTAAAATCCTGAAGGAAACCTATGAAAAGAAGCTGCTCAAAATGAATGAGAGCTAC
AACGAGGCAAAGAGTGAAGCAAACAAATGGAATGACCGATTCATTGCTCTTCAAAAAACA
CTTAAACAAAAAATGGAGCAAATTGAAAAACTTGAAGAAAAGAAGCAACGTGCAGAGAAC
CTGAATAAGCAATATCAGGAAGACATTCAAAAGATGACAGAAGAGAATAAGGAAAGAGAG
GAAACCATCATTGACAAGGAGAAACGAATCTTCAAACTGAAGAGGCAAAATCAGGAACTT
GAAAAGTTTAGATTTGTTTTAGAATACAAAATTTCAACCTTACAAGAACAAATTAAGCCA
AGTAAGGAAGAAATTACCGCTCTGAGAAGAGAAACCAAAAAGATGAGAAAAGAGTTGGAA
AAGGCGAAAGAAAAGAATGACCGGTTAATACTCAATATTAAGGATTTAGAACTAAAAATT
GATGGACGTGTTAAGGAAATACAACGACTCAACTTTAAAGTGAAAGACTCGGATACTCTT
CTCAAGAGAATACGTGCGGATATTTACAAGGTTGCACAACTGATCCAAGAGCCAAAAGAA
CTGAAAGAGGAAGTTGCAAAACTGTATCAAACCTATGTCTCTGAGCAAATTGCAACTCAA
GAAATGGACTTTGATATTCAAAAAGAATATGAAAGACAACGGTCCTATTTGGAAAAGACA
GTTGAATCCCTCAAGAAGAAGCTTGTAAAAGCGACTGAAACTTCAAAGGCAGATAATAAG
CGAATCATGAATGAGAATGTGTTACTGATCAAAGAAATTAATGAATTGAGGAAAGAAGTA
CGATCCCTCAAGAGCAGACTGAAAGATAAGGATGTGGAATCAAAAATCGGAAAGAAGAAT
TCTGTTGAGAACTTGACAGCATCTGCTGAAAAAGAACTTCCAGGCATCACTTCCCTTGAG
CAAGCTCTGAAAGAAATTGAAATGCAACGACACAAAATACAAACGCTACGAGAGAAAATT
GAGGAGTATGAAGCCGAGAAGAAGGCACTCTCAAGACCCATTTCCAGAGAACGGCTGCCA
CCAGTCATTGTATAA
- Download Fasta
- title: structural tetrad
- coordinates: H364,T382,D386,W392,N393,H404,V423,D427,M432,D433,S444,F445,A463,Y473,N474,H487,L504,D509,Y515,V516,H526,T527,V545,D549,F555,S556,F584,N589,H595,N599,H610,T628,D632
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ID | Site | Peptide | Score | Method | ID | Site | Peptide | Score | Method | ID | Site | Peptide | Score | Method | ID | Site | Peptide | Score | Method | ID | Site | Peptide | Score | Method | ID | Site | Peptide | Score | Method | ID | Site | Peptide | Score | Method | ID | Site | Peptide | Score | Method | ID | Site | Peptide | Score | Method | ID | Site | Peptide | Score | Method | ID | Site | Peptide | Score | Method |
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NF0056250 | 251 S | ILPSSPSDG | 0.996 | unsp | NF0056250 | 251 S | ILPSSPSDG | 0.996 | unsp | NF0056250 | 251 S | ILPSSPSDG | 0.996 | unsp | NF0056250 | 497 S | ALQWSDDDT | 0.994 | unsp | NF0056250 | 620 S | RIGKSWDDT | 0.995 | unsp | NF0056250 | 961 S | QIKPSKEEI | 0.995 | unsp | NF0056250 | 1075 S | ERQRSYLEK | 0.99 | unsp | NF0056250 | 1175 T | HKIQTLREK | 0.992 | unsp | NF0056250 | 1195 S | SRPISRERL | 0.996 | unsp | NF0056250 | 9 S | TRILSLKNV | 0.993 | unsp | NF0056250 | 57 S | TGSDSTEGI | 0.995 | unsp |