• Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0008236      

  • Computed_GO_Functions:  serine-type peptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
NF0057220OTHER0.9999570.0000220.000021
No Results
  • Fasta :-

    >NF0057220 MDLNPQQRDLMTQLYEHVKSIPTISSGSFISSSSSQNSSSSIELTCSYSDYQNDKTINIL KQYHLVLNSEAKKDQTTVVVSSVFPSIVPADVHASSISPSGQRKALFKCISQDGKPNAQT GALDYQIEIYANQLLQTRVLVKDIHGKLFTDETFARVSWSSDENKILYVAELKQENVKAY WEKRKPSTPESDNGSSTAQSNFEFKYDYERKEDWGEQILLKNPHIYELDIKAKQVTHVDV IPNNVSAGSPIYLQNSNQFVYVGYEKPVRKLGLKYCMQRDAKLFYCDRQKVEQIAKQFRG IRRPVFSPCGTKLAFLAFDNDVNYHNSTSKLVVLNWNESKSDYQVIVDIVQKVSVSNEAE LMQAFPGLYTAELSLNCWSADSRYIVVNSIWRSVTSMLVIDISKTSNNVKRVLGNAGSYD SIVFLNQDANKQKVLFYQTTPASPFELYVADINYENGDLSNLKLLEDGLQTLEDSLVENA SLRDKIKEVTWKVLHIPVEQKENSNIFIDAILYVPKTPKGFLGTTQSQDEKKHSLIAFPH GGPHSAFITSFSSQSIFYALCGYAVLFINYRGSVGFGQEFAGCLPGAVGDLDVKDCHTAI QYVMNHNVLEVDSESISALGGSHGGFLAAHLIGQYPDLFKCSIMRNPVINLSTIYGESDI PDWCYCESLGNEYYDEAFATKDMVKKMYERSPIRHVNKVTAAVMLLVGEVDRRVPKEQPR EFYHALKFLGKSKDVKMLVYPENDHPIAKPSAEFDSMVSSLLFLYAHAQ
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NF0057220.fa Sequence name : NF0057220 Sequence length : 769 VALUES OF COMPUTED PARAMETERS Coef20 : 3.273 CoefTot : 0.000 ChDiff : -11 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.476 1.400 0.254 0.584 MesoH : 0.202 0.522 -0.154 0.346 MuHd_075 : 21.088 12.314 6.432 4.646 MuHd_095 : 28.064 22.119 8.051 6.126 MuHd_100 : 30.727 21.460 7.672 5.619 MuHd_105 : 27.327 16.874 5.611 4.271 Hmax_075 : 5.367 3.733 -1.480 2.765 Hmax_095 : 9.600 12.700 0.526 4.450 Hmax_100 : 7.300 10.800 -1.076 3.790 Hmax_105 : 0.300 3.500 -3.888 1.910 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8617 0.1383 DFMC : 0.9017 0.0983
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 769 NF0057220 MDLNPQQRDLMTQLYEHVKSIPTISSGSFISSSSSQNSSSSIELTCSYSDYQNDKTINILKQYHLVLNSEAKKDQTTVVV 80 SSVFPSIVPADVHASSISPSGQRKALFKCISQDGKPNAQTGALDYQIEIYANQLLQTRVLVKDIHGKLFTDETFARVSWS 160 SDENKILYVAELKQENVKAYWEKRKPSTPESDNGSSTAQSNFEFKYDYERKEDWGEQILLKNPHIYELDIKAKQVTHVDV 240 IPNNVSAGSPIYLQNSNQFVYVGYEKPVRKLGLKYCMQRDAKLFYCDRQKVEQIAKQFRGIRRPVFSPCGTKLAFLAFDN 320 DVNYHNSTSKLVVLNWNESKSDYQVIVDIVQKVSVSNEAELMQAFPGLYTAELSLNCWSADSRYIVVNSIWRSVTSMLVI 400 DISKTSNNVKRVLGNAGSYDSIVFLNQDANKQKVLFYQTTPASPFELYVADINYENGDLSNLKLLEDGLQTLEDSLVENA 480 SLRDKIKEVTWKVLHIPVEQKENSNIFIDAILYVPKTPKGFLGTTQSQDEKKHSLIAFPHGGPHSAFITSFSSQSIFYAL 560 CGYAVLFINYRGSVGFGQEFAGCLPGAVGDLDVKDCHTAIQYVMNHNVLEVDSESISALGGSHGGFLAAHLIGQYPDLFK 640 CSIMRNPVINLSTIYGESDIPDWCYCESLGNEYYDEAFATKDMVKKMYERSPIRHVNKVTAAVMLLVGEVDRRVPKEQPR 720 EFYHALKFLGKSKDVKMLVYPENDHPIAKPSAEFDSMVSSLLFLYAHAQ 800 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................. 800 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NF0057220 8 DLNPQQR|DL 0.171 . NF0057220 19 QLYEHVK|SI 0.086 . NF0057220 55 SDYQNDK|TI 0.064 . NF0057220 61 KTINILK|QY 0.071 . NF0057220 72 VLNSEAK|KD 0.067 . NF0057220 73 LNSEAKK|DQ 0.163 . NF0057220 103 ISPSGQR|KA 0.072 . NF0057220 104 SPSGQRK|AL 0.159 . NF0057220 108 QRKALFK|CI 0.089 . NF0057220 115 CISQDGK|PN 0.067 . NF0057220 138 NQLLQTR|VL 0.073 . NF0057220 142 QTRVLVK|DI 0.099 . NF0057220 147 VKDIHGK|LF 0.066 . NF0057220 156 TDETFAR|VS 0.092 . NF0057220 165 WSSDENK|IL 0.080 . NF0057220 173 LYVAELK|QE 0.057 . NF0057220 178 LKQENVK|AY 0.067 . NF0057220 183 VKAYWEK|RK 0.060 . NF0057220 184 KAYWEKR|KP 0.196 . NF0057220 185 AYWEKRK|PS 0.091 . NF0057220 205 QSNFEFK|YD 0.072 . NF0057220 210 FKYDYER|KE 0.090 . NF0057220 211 KYDYERK|ED 0.082 . NF0057220 221 GEQILLK|NP 0.064 . NF0057220 231 IYELDIK|AK 0.058 . NF0057220 233 ELDIKAK|QV 0.092 . NF0057220 266 VYVGYEK|PV 0.065 . NF0057220 269 GYEKPVR|KL 0.093 . NF0057220 270 YEKPVRK|LG 0.072 . NF0057220 274 VRKLGLK|YC 0.061 . NF0057220 279 LKYCMQR|DA 0.099 . NF0057220 282 CMQRDAK|LF 0.100 . NF0057220 288 KLFYCDR|QK 0.076 . NF0057220 290 FYCDRQK|VE 0.054 . NF0057220 296 KVEQIAK|QF 0.066 . NF0057220 299 QIAKQFR|GI 0.124 . NF0057220 302 KQFRGIR|RP 0.125 . NF0057220 303 QFRGIRR|PV 0.178 . NF0057220 312 FSPCGTK|LA 0.060 . NF0057220 330 YHNSTSK|LV 0.066 . NF0057220 340 LNWNESK|SD 0.090 . NF0057220 352 IVDIVQK|VS 0.055 . NF0057220 383 CWSADSR|YI 0.091 . NF0057220 392 VVNSIWR|SV 0.172 . NF0057220 404 LVIDISK|TS 0.057 . NF0057220 410 KTSNNVK|RV 0.075 . NF0057220 411 TSNNVKR|VL 0.377 . NF0057220 431 LNQDANK|QK 0.059 . NF0057220 433 QDANKQK|VL 0.073 . NF0057220 463 GDLSNLK|LL 0.078 . NF0057220 483 VENASLR|DK 0.126 . NF0057220 485 NASLRDK|IK 0.065 . NF0057220 487 SLRDKIK|EV 0.102 . NF0057220 492 IKEVTWK|VL 0.071 . NF0057220 501 HIPVEQK|EN 0.067 . NF0057220 516 AILYVPK|TP 0.062 . NF0057220 519 YVPKTPK|GF 0.060 . NF0057220 531 TQSQDEK|KH 0.065 . NF0057220 532 QSQDEKK|HS 0.141 . NF0057220 571 VLFINYR|GS 0.081 . NF0057220 594 VGDLDVK|DC 0.064 . NF0057220 640 QYPDLFK|CS 0.057 . NF0057220 645 FKCSIMR|NP 0.083 . NF0057220 681 DEAFATK|DM 0.067 . NF0057220 685 ATKDMVK|KM 0.056 . NF0057220 686 TKDMVKK|MY 0.133 . NF0057220 690 VKKMYER|SP 0.101 . NF0057220 694 YERSPIR|HV 0.146 . NF0057220 698 PIRHVNK|VT 0.073 . NF0057220 712 LVGEVDR|RV 0.110 . NF0057220 713 VGEVDRR|VP 0.096 . NF0057220 716 VDRRVPK|EQ 0.123 . NF0057220 720 VPKEQPR|EF 0.110 . NF0057220 727 EFYHALK|FL 0.082 . NF0057220 731 ALKFLGK|SK 0.086 . NF0057220 733 KFLGKSK|DV 0.078 . NF0057220 736 GKSKDVK|ML 0.075 . NF0057220 749 NDHPIAK|PS 0.068 . ____________________________^_________________
  • Fasta :-

    >NF0057220 ATGGACTTGAATCCTCAACAGAGAGATCTTATGACTCAACTCTATGAGCACGTCAAATCG ATTCCTACTATTTCTTCGGGCAGTTTTATTTCATCATCATCATCTCAAAACTCTTCCTCC TCAATTGAATTAACTTGCTCCTATTCCGATTATCAAAATGACAAGACGATCAATATTCTC AAACAATATCACCTTGTTTTGAATTCCGAAGCAAAGAAGGATCAAACGACGGTCGTTGTT TCATCGGTATTTCCATCCATTGTGCCGGCTGATGTTCATGCTTCTTCCATCTCTCCAAGT GGTCAACGTAAGGCTCTCTTTAAATGTATTTCTCAGGATGGAAAGCCAAATGCTCAGACC GGAGCACTCGATTATCAAATTGAAATCTATGCCAATCAATTATTGCAGACAAGAGTTTTG GTCAAGGACATTCATGGTAAGCTCTTTACCGATGAGACCTTTGCGAGAGTTTCTTGGTCC AGTGATGAAAACAAAATTCTCTATGTTGCAGAGTTGAAGCAAGAAAACGTGAAAGCATAT TGGGAGAAGCGAAAGCCATCAACACCAGAATCAGACAATGGATCTTCTACTGCACAGTCA AATTTTGAGTTCAAGTATGATTATGAGAGGAAGGAAGATTGGGGAGAACAAATTTTGTTA AAGAATCCTCACATTTATGAATTGGATATCAAAGCCAAACAAGTCACTCATGTGGATGTG ATTCCAAACAATGTCAGTGCTGGATCTCCAATTTATTTACAAAATTCCAATCAATTTGTC TATGTTGGATATGAAAAGCCAGTTCGAAAGTTAGGTCTCAAATACTGCATGCAAAGAGAT GCCAAATTGTTTTATTGTGACCGACAAAAGGTGGAGCAAATAGCCAAACAATTTAGAGGA ATTAGAAGACCTGTCTTTTCTCCTTGTGGCACTAAACTTGCGTTTTTGGCATTTGACAAT GATGTGAACTATCACAATTCAACTTCGAAACTTGTTGTTTTGAATTGGAACGAAAGCAAA TCGGATTATCAAGTGATTGTAGATATCGTGCAGAAAGTATCAGTTTCCAACGAAGCGGAA TTAATGCAAGCTTTTCCAGGTCTGTACACCGCGGAATTGTCTCTCAACTGTTGGAGTGCT GATTCAAGATATATTGTTGTTAATTCAATATGGAGAAGTGTCACATCAATGCTAGTGATT GACATCAGCAAAACATCCAATAACGTAAAAAGAGTGTTAGGAAATGCTGGCTCTTACGAT TCGATTGTGTTCTTGAATCAGGATGCCAACAAACAAAAGGTTCTCTTCTACCAAACCACT CCAGCATCTCCTTTTGAACTCTATGTAGCAGATATTAATTATGAAAATGGTGATCTTTCA AACTTGAAACTATTGGAAGATGGTCTTCAAACTCTGGAAGACTCTCTTGTTGAAAATGCA AGTCTGAGAGACAAAATCAAGGAGGTGACATGGAAGGTCTTACATATTCCTGTTGAACAG AAGGAGAACTCAAATATATTTATTGATGCAATTTTATATGTTCCCAAAACTCCTAAAGGA TTCTTGGGAACAACCCAATCACAAGACGAGAAAAAACATAGTCTTATTGCATTCCCTCAT GGTGGCCCTCATTCTGCCTTTATCACATCATTCTCTTCACAAAGCATTTTCTACGCTCTT TGTGGATATGCTGTGTTATTTATTAATTACAGAGGTAGCGTCGGCTTTGGACAAGAATTT GCAGGATGTTTACCCGGTGCTGTTGGAGACTTGGACGTTAAGGATTGTCACACTGCAATT CAATACGTAATGAACCATAATGTTTTAGAGGTCGATTCTGAGAGCATTTCTGCTTTAGGA GGAAGCCACGGTGGATTTTTAGCTGCACATCTAATTGGACAATATCCTGATTTATTTAAA TGCTCAATCATGAGAAATCCTGTCATTAATCTCAGCACAATTTATGGAGAGAGTGACATT CCAGATTGGTGTTATTGTGAAAGCTTAGGAAATGAGTATTACGATGAAGCTTTTGCTACC AAAGATATGGTAAAAAAAATGTATGAACGATCACCAATTCGTCATGTTAATAAGGTGACT GCTGCGGTGATGTTGTTGGTTGGAGAGGTTGATCGTCGAGTCCCCAAAGAACAACCACGA GAATTTTATCACGCCTTAAAATTCTTAGGAAAGTCCAAAGATGTCAAAATGCTCGTCTAC CCAGAGAACGATCATCCAATCGCAAAACCAAGTGCTGAATTCGACAGTATGGTAAGCTCT CTTTTGTTCTTGTATGCTCATGCTCAATAA
  • Download Fasta
  • Fasta :-

    MDLNPQQRDLMTQLYEHVKSIPTISSGSFISSSSSQNSSSSIELTCSYSDYQNDKTINIL KQYHLVLNSEAKKDQTTVVVSSVFPSIVPADVHASSISPSGQRKALFKCISQDGKPNAQT GALDYQIEIYANQLLQTRVLVKDIHGKLFTDETFARVSWSSDENKILYVAELKQENVKAY WEKRKPSTPESDNGSSTAQSNFEFKYDYERKEDWGEQILLKNPHIYELDIKAKQVTHVDV IPNNVSAGSPIYLQNSNQFVYVGYEKPVRKLGLKYCMQRDAKLFYCDRQKVEQIAKQFRG IRRPVFSPCGTKLAFLAFDNDVNYHNSTSKLVVLNWNESKSDYQVIVDIVQKVSVSNEAE LMQAFPGLYTAELSLNCWSADSRYIVVNSIWRSVTSMLVIDISKTSNNVKRVLGNAGSYD SIVFLNQDANKQKVLFYQTTPASPFELYVADINYENGDLSNLKLLEDGLQTLEDSLVENA SLRDKIKEVTWKVLHIPVEQKENSNIFIDAILYVPKTPKGFLGTTQSQDEKKHSLIAFPH GGPHSAFITSFSSQSIFYALCGYAVLFINYRGSVGFGQEFAGCLPGAVGDLDVKDCHTAI QYVMNHNVLEVDSESISALGGSHGGFLAAHLIGQYPDLFKCSIMRNPVINLSTIYGESDI PDWCYCESLGNEYYDEAFATKDMVKKMYERSPIRHVNKVTAAVMLLVGEVDRRVPKEQPR EFYHALKFLGKSKDVKMLVYPENDHPIAKPSAEFDSMVSSLLFLYAHAQ

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
NF0057220307 SRPVFSPCGT0.994unspNF0057220307 SRPVFSPCGT0.994unspNF0057220307 SRPVFSPCGT0.994unspNF0057220158 SFARVSWSSD0.996unspNF0057220187 SKRKPSTPES0.997unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India