NF0058120 | uncharacterized aarf domain-containing protein kinase 1 isoform x1

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No Results
No Results

  • Fasta :-

    >NF0058120 MLKYTTVWRGLHGVKHKFGTILKSRGVVLSSFGFTNYHHHHDNMIIPHGGSLSLFTSTSL TTSFRLFSQSSLSRTTLLDSQKVAPEAPQVHSSSNNQKQSSNSNGEQENNKTTHKGFSFL KFLKKLIKYMTISVASVMGLLAVCLPPALMVDFKEEFENDGYRAVLVALLDAYKDTWNII ARFTRSCYSIGKVMTIYRNLNKDFEPKFESISRNKRSDHEISSEEELQVLRDYVTTRRQA NAKAAEILLDLCLHNGGAYVKAGQYIASLNYIMPKEITDILSVLQDKCQQHDFSVTEKIL LEDLDRDYREIFSSFDTTPIASASIAQVHKATLRDGNQTVAVKIQHPDLIRIFKADLKTM QFLLFSTKLFFDFPFAWTLPEFERILLSELDFVNEAANCSHFSQMFKDYPDNQIDAPRVH WNLTSKRILTMDFIEGCKINDLQALKSMNIDPKEVAKLLVDSYSIQTFIHGFVHSDIHVG NLLVRRSEKNNKPQLIYLDHGCYKKLDEETRKDYCQLWKAAIFRDHENLKLYTEKFGIDG RFYPLFGLFLTFSNYMDKSSSSMVDQRKNMTSEEAKKMFKQIRETFFPKSTHKAQDLFNI IEEMFRNMKLDLILLMRANVQLRSITRELGRPINRFAIMAEYCLKGIHYERKNYEMPCIP HRESDQRRVAVTHVQPTPFFHQLTFDLFKFKLRLLVLDLAFVFFNLSMRILRYFNPSKYE EAEDDRETSRVKRRLDRMKQQKKAMEEDVASSKEDIEDLSAQQ
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NF0058120.fa Sequence name : NF0058120 Sequence length : 763 VALUES OF COMPUTED PARAMETERS Coef20 : 3.619 CoefTot : -1.877 ChDiff : 11 ZoneTo : 78 KR : 8 DE : 1 CleavSite : 75 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.029 2.065 0.416 0.686 MesoH : -0.233 0.602 -0.320 0.256 MuHd_075 : 34.169 19.292 7.735 7.731 MuHd_095 : 28.229 29.073 10.817 7.896 MuHd_100 : 34.689 32.280 11.900 9.474 MuHd_105 : 32.691 29.115 10.157 8.666 Hmax_075 : 15.100 18.200 2.011 4.220 Hmax_095 : 17.325 22.900 4.246 7.480 Hmax_100 : 18.600 22.900 4.246 7.480 Hmax_105 : 8.100 21.700 3.019 7.828 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.6455 0.3545 DFMC : 0.4339 0.5661 This protein is probably imported in chloroplast. f(Ser) = 0.1538 f(Arg) = 0.0513 CMi = 1.08499 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 763 NF0058120 MLKYTTVWRGLHGVKHKFGTILKSRGVVLSSFGFTNYHHHHDNMIIPHGGSLSLFTSTSLTTSFRLFSQSSLSRTTLLDS 80 QKVAPEAPQVHSSSNNQKQSSNSNGEQENNKTTHKGFSFLKFLKKLIKYMTISVASVMGLLAVCLPPALMVDFKEEFEND 160 GYRAVLVALLDAYKDTWNIIARFTRSCYSIGKVMTIYRNLNKDFEPKFESISRNKRSDHEISSEEELQVLRDYVTTRRQA 240 NAKAAEILLDLCLHNGGAYVKAGQYIASLNYIMPKEITDILSVLQDKCQQHDFSVTEKILLEDLDRDYREIFSSFDTTPI 320 ASASIAQVHKATLRDGNQTVAVKIQHPDLIRIFKADLKTMQFLLFSTKLFFDFPFAWTLPEFERILLSELDFVNEAANCS 400 HFSQMFKDYPDNQIDAPRVHWNLTSKRILTMDFIEGCKINDLQALKSMNIDPKEVAKLLVDSYSIQTFIHGFVHSDIHVG 480 NLLVRRSEKNNKPQLIYLDHGCYKKLDEETRKDYCQLWKAAIFRDHENLKLYTEKFGIDGRFYPLFGLFLTFSNYMDKSS 560 SSMVDQRKNMTSEEAKKMFKQIRETFFPKSTHKAQDLFNIIEEMFRNMKLDLILLMRANVQLRSITRELGRPINRFAIMA 640 EYCLKGIHYERKNYEMPCIPHRESDQRRVAVTHVQPTPFFHQLTFDLFKFKLRLLVLDLAFVFFNLSMRILRYFNPSKYE 720 EAEDDRETSRVKRRLDRMKQQKKAMEEDVASSKEDIEDLSAQQ 800 ................................................................................ 80 ................................................................................ 160 ........................P..............................P........................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ............P.............................. 800 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 3 Name Pos Context Score Pred ____________________________v_________________ NF0058120 3 ----MLK|YT 0.067 . NF0058120 9 KYTTVWR|GL 0.113 . NF0058120 15 RGLHGVK|HK 0.060 . NF0058120 17 LHGVKHK|FG 0.073 . NF0058120 23 KFGTILK|SR 0.088 . NF0058120 25 GTILKSR|GV 0.114 . NF0058120 65 SLTTSFR|LF 0.091 . NF0058120 74 SQSSLSR|TT 0.071 . NF0058120 82 TLLDSQK|VA 0.064 . NF0058120 98 SSSNNQK|QS 0.093 . NF0058120 111 GEQENNK|TT 0.075 . NF0058120 115 NNKTTHK|GF 0.064 . NF0058120 121 KGFSFLK|FL 0.069 . NF0058120 124 SFLKFLK|KL 0.063 . NF0058120 125 FLKFLKK|LI 0.094 . NF0058120 128 FLKKLIK|YM 0.068 . NF0058120 154 ALMVDFK|EE 0.062 . NF0058120 163 FENDGYR|AV 0.119 . NF0058120 174 ALLDAYK|DT 0.073 . NF0058120 182 TWNIIAR|FT 0.129 . NF0058120 185 IIARFTR|SC 0.548 *ProP* NF0058120 192 SCYSIGK|VM 0.060 . NF0058120 198 KVMTIYR|NL 0.084 . NF0058120 202 IYRNLNK|DF 0.088 . NF0058120 207 NKDFEPK|FE 0.073 . NF0058120 213 KFESISR|NK 0.071 . NF0058120 215 ESISRNK|RS 0.067 . NF0058120 216 SISRNKR|SD 0.780 *ProP* NF0058120 231 EELQVLR|DY 0.082 . NF0058120 237 RDYVTTR|RQ 0.087 . NF0058120 238 DYVTTRR|QA 0.127 . NF0058120 243 RRQANAK|AA 0.110 . NF0058120 261 NGGAYVK|AG 0.057 . NF0058120 275 LNYIMPK|EI 0.085 . NF0058120 287 LSVLQDK|CQ 0.061 . NF0058120 298 DFSVTEK|IL 0.065 . NF0058120 306 LLEDLDR|DY 0.111 . NF0058120 309 DLDRDYR|EI 0.205 . NF0058120 330 SIAQVHK|AT 0.071 . NF0058120 334 VHKATLR|DG 0.089 . NF0058120 343 NQTVAVK|IQ 0.059 . NF0058120 351 QHPDLIR|IF 0.084 . NF0058120 354 DLIRIFK|AD 0.109 . NF0058120 358 IFKADLK|TM 0.056 . NF0058120 368 FLLFSTK|LF 0.060 . NF0058120 384 TLPEFER|IL 0.090 . NF0058120 407 HFSQMFK|DY 0.082 . NF0058120 418 NQIDAPR|VH 0.073 . NF0058120 426 HWNLTSK|RI 0.068 . NF0058120 427 WNLTSKR|IL 0.145 . NF0058120 438 DFIEGCK|IN 0.053 . NF0058120 446 NDLQALK|SM 0.063 . NF0058120 453 SMNIDPK|EV 0.097 . NF0058120 457 DPKEVAK|LL 0.073 . NF0058120 485 VGNLLVR|RS 0.083 . NF0058120 486 GNLLVRR|SE 0.177 . NF0058120 489 LVRRSEK|NN 0.151 . NF0058120 492 RSEKNNK|PQ 0.069 . NF0058120 504 LDHGCYK|KL 0.072 . NF0058120 505 DHGCYKK|LD 0.086 . NF0058120 511 KLDEETR|KD 0.082 . NF0058120 512 LDEETRK|DY 0.101 . NF0058120 519 DYCQLWK|AA 0.062 . NF0058120 524 WKAAIFR|DH 0.114 . NF0058120 530 RDHENLK|LY 0.064 . NF0058120 535 LKLYTEK|FG 0.076 . NF0058120 541 KFGIDGR|FY 0.075 . NF0058120 558 FSNYMDK|SS 0.097 . NF0058120 567 SSMVDQR|KN 0.133 . NF0058120 568 SMVDQRK|NM 0.088 . NF0058120 576 MTSEEAK|KM 0.085 . NF0058120 577 TSEEAKK|MF 0.160 . NF0058120 580 EAKKMFK|QI 0.066 . NF0058120 583 KMFKQIR|ET 0.108 . NF0058120 589 RETFFPK|ST 0.116 . NF0058120 593 FPKSTHK|AQ 0.061 . NF0058120 606 IIEEMFR|NM 0.066 . NF0058120 609 EMFRNMK|LD 0.082 . NF0058120 617 DLILLMR|AN 0.077 . NF0058120 623 RANVQLR|SI 0.200 . NF0058120 627 QLRSITR|EL 0.099 . NF0058120 631 ITRELGR|PI 0.091 . NF0058120 635 LGRPINR|FA 0.129 . NF0058120 645 MAEYCLK|GI 0.072 . NF0058120 651 KGIHYER|KN 0.079 . NF0058120 652 GIHYERK|NY 0.084 . NF0058120 662 MPCIPHR|ES 0.116 . NF0058120 667 HRESDQR|RV 0.120 . NF0058120 668 RESDQRR|VA 0.225 . NF0058120 689 LTFDLFK|FK 0.059 . NF0058120 691 FDLFKFK|LR 0.058 . NF0058120 693 LFKFKLR|LL 0.075 . NF0058120 709 FFNLSMR|IL 0.086 . NF0058120 712 LSMRILR|YF 0.268 . NF0058120 718 RYFNPSK|YE 0.070 . NF0058120 726 EEAEDDR|ET 0.087 . NF0058120 730 DDRETSR|VK 0.079 . NF0058120 732 RETSRVK|RR 0.055 . NF0058120 733 ETSRVKR|RL 0.670 *ProP* NF0058120 734 TSRVKRR|LD 0.215 . NF0058120 737 VKRRLDR|MK 0.330 . NF0058120 739 RRLDRMK|QQ 0.074 . NF0058120 742 DRMKQQK|KA 0.092 . NF0058120 743 RMKQQKK|AM 0.109 . NF0058120 753 EDVASSK|ED 0.061 . ____________________________^_________________

  • Fasta :-

    >NF0058120 ATGTTGAAATATACCACTGTTTGGAGAGGACTCCATGGAGTGAAACACAAGTTCGGAACG ATTCTCAAATCTCGAGGAGTCGTCTTGTCATCTTTTGGATTCACCAATTATCATCATCAT CATGATAACATGATCATTCCTCATGGAGGTTCTCTCTCGTTATTCACCTCAACCTCACTT ACCACATCATTCCGACTCTTCTCTCAATCATCCTTGTCTCGAACAACATTATTGGACAGT CAAAAGGTAGCTCCGGAAGCACCTCAAGTACATTCATCATCGAATAACCAAAAACAGTCA TCCAATTCGAATGGCGAGCAAGAAAACAACAAAACAACCCACAAGGGGTTTTCCTTTCTT AAATTCCTCAAAAAGCTCATCAAATACATGACCATTTCAGTTGCCTCTGTTATGGGTTTG CTTGCGGTGTGTTTACCTCCTGCTTTGATGGTGGATTTCAAAGAGGAGTTTGAAAATGAT GGTTATAGAGCTGTGCTTGTGGCTCTTTTGGATGCATATAAGGATACGTGGAACATTATC GCAAGATTTACTCGATCATGCTACTCGATCGGAAAGGTTATGACTATCTATCGAAATCTC AATAAGGATTTTGAGCCAAAATTTGAAAGTATTTCCAGAAACAAGAGAAGTGACCATGAA ATTTCTTCGGAAGAGGAACTGCAAGTGTTGCGAGATTATGTGACAACACGAAGACAAGCC AATGCTAAAGCAGCAGAAATTTTACTTGATCTATGTTTGCACAATGGTGGTGCATATGTG AAGGCAGGTCAATATATTGCATCGCTCAATTATATTATGCCTAAGGAAATTACAGATATT CTTTCGGTGCTGCAAGACAAGTGTCAACAACATGATTTTTCAGTCACTGAGAAAATATTA TTGGAGGACTTGGATCGAGACTATCGAGAAATATTCTCCTCCTTCGATACTACGCCAATA GCAAGCGCCAGCATTGCACAGGTACATAAAGCCACTTTGAGAGACGGAAATCAAACCGTG GCTGTCAAAATTCAACATCCAGACTTGATTCGTATTTTTAAGGCTGATTTGAAAACGATG CAATTTTTACTCTTTTCAACGAAATTATTTTTCGATTTTCCCTTTGCATGGACTTTGCCA GAGTTTGAGAGAATTTTATTGAGCGAATTAGACTTTGTGAATGAAGCTGCTAATTGTTCA CATTTTTCTCAAATGTTCAAAGATTACCCTGATAATCAAATTGATGCGCCACGAGTTCAT TGGAATTTAACAAGCAAACGAATACTAACTATGGATTTTATTGAGGGGTGCAAAATCAAT GACTTGCAAGCATTGAAAAGCATGAACATTGATCCTAAAGAGGTAGCCAAATTGTTGGTA GATAGTTATTCCATTCAGACTTTTATTCATGGATTTGTTCATAGTGATATACATGTTGGA AATTTACTAGTGCGGCGCTCAGAAAAGAATAACAAACCTCAACTCATATATTTAGATCAT GGATGCTACAAAAAACTCGATGAAGAAACTAGAAAAGATTATTGTCAATTGTGGAAGGCT GCAATTTTTAGAGATCATGAGAATTTGAAATTATATACCGAAAAATTTGGAATTGACGGA AGATTTTATCCCCTCTTTGGGTTGTTCTTGACCTTTTCAAATTATATGGATAAAAGTTCA AGTTCCATGGTGGACCAACGAAAGAACATGACCAGTGAAGAAGCAAAGAAAATGTTTAAA CAAATTAGAGAGACCTTTTTCCCTAAAAGCACTCATAAGGCACAAGATTTATTCAACATT ATCGAAGAAATGTTCCGCAATATGAAATTGGATCTTATTTTACTCATGAGAGCCAATGTT CAATTAAGATCCATCACAAGAGAGTTGGGTCGACCAATCAATCGATTCGCCATCATGGCA GAATATTGTCTGAAAGGAATTCATTATGAAAGAAAAAATTATGAAATGCCTTGCATTCCA CATCGAGAATCAGATCAGAGACGAGTCGCTGTCACTCATGTTCAACCAACACCCTTCTTT CATCAACTCACGTTTGATTTATTCAAATTTAAGCTCCGTTTACTTGTGTTAGATTTGGCA TTTGTATTTTTCAACTTGTCGATGCGAATATTGAGATATTTCAATCCTTCCAAATATGAG GAAGCAGAAGATGACAGGGAAACTTCACGAGTGAAAAGAAGATTGGATCGAATGAAACAA CAAAAGAAAGCTATGGAAGAAGATGTAGCCTCTTCGAAAGAGGACATTGAAGATTTATCG GCTCAACAGTAA
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  • Fasta :-

  • title: putative ATP binding site
  • coordinates: L333,R334,D335,G336,Q338,V340,I350,I352,P410,M431,D432,F433,I434,D476,G480,N481,L483,L498,D499
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
NF0058120222 SDHEISSEEE0.994unspNF0058120222 SDHEISSEEE0.994unspNF0058120222 SDHEISSEEE0.994unspNF0058120223 SHEISSEEEL0.991unspNF0058120487 SLVRRSEKNN0.997unspNF0058120562 SKSSSSMVDQ0.998unspNF0058120717 SYFNPSKYEE0.991unspNF0058120728 TDDRETSRVK0.99unspNF0058120751 SEDVASSKED0.995unspNF0058120752 SDVASSKEDI0.998unspNF005812080 STLLDSQKVA0.991unspNF0058120103 SQSSNSNGEQ0.997unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India