NF0060530 | 3-hydroxyisobutyryl- mitochondrial-like

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0003860      

  • Computed_GO_Functions:  3-hydroxyisobutyryl-CoA hydrolase activity      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
NF0060530mTP0.3520990.0002610.647640CS pos: 45-46. QRM-TS. Pr: 0.6127
No Results

  • Fasta :-

    >NF0060530 MKKMHRTTSLCSKAFKSFSSKIQIHTNLGIQQHVRLFHSNHFQRMTSTTIEPQVLFHDRS SEPSVQVITLNRPKALNSLNLEMVRELTPRYEQLSSSNDPCKMIILKGTGDKAFCAGGDI KAIYESKDPKFFAEEYQLNYLIGSLYEKHKKVQIALLNGITMGGGVGLSVQPDTIRVATE KTVFAMPETAIGFFCDVGGSYFLPRIPIKGLGMYLALTGARLKGEQCVVAGIATHFVPSD KLGELEELLVKLSREHNGLLSPQIIGSEITKHFPQDQYLNTSHAKSFLQHEKEISLFDPS VNPTVHDIIESLKKLNTHHAEHTLKTLEQMSPTSLRVVHRQLRMGAVLGYKECFDMELGI AKHMMFGHDFFEGVRALLVDKDKNPKWNPPTLDQVKKKEIDAYFEAFLTTSAKITQHNEN A
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NF0060530.fa Sequence name : NF0060530 Sequence length : 421 VALUES OF COMPUTED PARAMETERS Coef20 : 4.652 CoefTot : -1.202 ChDiff : 5 ZoneTo : 50 KR : 8 DE : 0 CleavSite : 46 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.576 1.500 0.251 0.644 MesoH : 0.125 0.660 -0.139 0.341 MuHd_075 : 26.844 16.619 8.217 6.392 MuHd_095 : 36.882 25.490 12.594 8.186 MuHd_100 : 48.059 24.960 13.648 9.478 MuHd_105 : 53.685 26.709 14.515 10.519 Hmax_075 : 9.700 10.033 0.414 3.477 Hmax_095 : 16.200 14.612 3.779 4.883 Hmax_100 : 18.600 10.500 2.897 3.870 Hmax_105 : 17.675 11.300 3.057 3.929 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.0145 0.9855 DFMC : 0.0111 0.9889 This protein is probably imported in mitochondria. f(Ser) = 0.1400 f(Arg) = 0.0600 CMi = 0.90909 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 421 NF0060530 MKKMHRTTSLCSKAFKSFSSKIQIHTNLGIQQHVRLFHSNHFQRMTSTTIEPQVLFHDRSSEPSVQVITLNRPKALNSLN 80 LEMVRELTPRYEQLSSSNDPCKMIILKGTGDKAFCAGGDIKAIYESKDPKFFAEEYQLNYLIGSLYEKHKKVQIALLNGI 160 TMGGGVGLSVQPDTIRVATEKTVFAMPETAIGFFCDVGGSYFLPRIPIKGLGMYLALTGARLKGEQCVVAGIATHFVPSD 240 KLGELEELLVKLSREHNGLLSPQIIGSEITKHFPQDQYLNTSHAKSFLQHEKEISLFDPSVNPTVHDIIESLKKLNTHHA 320 EHTLKTLEQMSPTSLRVVHRQLRMGAVLGYKECFDMELGIAKHMMFGHDFFEGVRALLVDKDKNPKWNPPTLDQVKKKEI 400 DAYFEAFLTTSAKITQHNENA 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ..................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NF0060530 2 -----MK|KM 0.061 . NF0060530 3 ----MKK|MH 0.088 . NF0060530 6 -MKKMHR|TT 0.083 . NF0060530 13 TTSLCSK|AF 0.065 . NF0060530 16 LCSKAFK|SF 0.122 . NF0060530 21 FKSFSSK|IQ 0.071 . NF0060530 35 GIQQHVR|LF 0.095 . NF0060530 44 HSNHFQR|MT 0.164 . NF0060530 59 QVLFHDR|SS 0.162 . NF0060530 72 QVITLNR|PK 0.063 . NF0060530 74 ITLNRPK|AL 0.061 . NF0060530 85 LNLEMVR|EL 0.079 . NF0060530 90 VRELTPR|YE 0.083 . NF0060530 102 SSNDPCK|MI 0.085 . NF0060530 107 CKMIILK|GT 0.085 . NF0060530 112 LKGTGDK|AF 0.076 . NF0060530 121 CAGGDIK|AI 0.066 . NF0060530 127 KAIYESK|DP 0.060 . NF0060530 130 YESKDPK|FF 0.076 . NF0060530 148 IGSLYEK|HK 0.065 . NF0060530 150 SLYEKHK|KV 0.092 . NF0060530 151 LYEKHKK|VQ 0.098 . NF0060530 176 VQPDTIR|VA 0.080 . NF0060530 181 IRVATEK|TV 0.099 . NF0060530 205 GSYFLPR|IP 0.147 . NF0060530 209 LPRIPIK|GL 0.094 . NF0060530 221 LALTGAR|LK 0.081 . NF0060530 223 LTGARLK|GE 0.061 . NF0060530 241 HFVPSDK|LG 0.062 . NF0060530 251 LEELLVK|LS 0.054 . NF0060530 254 LLVKLSR|EH 0.078 . NF0060530 271 IGSEITK|HF 0.066 . NF0060530 285 LNTSHAK|SF 0.102 . NF0060530 292 SFLQHEK|EI 0.071 . NF0060530 313 DIIESLK|KL 0.061 . NF0060530 314 IIESLKK|LN 0.088 . NF0060530 325 HAEHTLK|TL 0.076 . NF0060530 336 MSPTSLR|VV 0.185 . NF0060530 340 SLRVVHR|QL 0.137 . NF0060530 343 VVHRQLR|MG 0.168 . NF0060530 351 GAVLGYK|EC 0.064 . NF0060530 362 MELGIAK|HM 0.065 . NF0060530 375 DFFEGVR|AL 0.062 . NF0060530 381 RALLVDK|DK 0.064 . NF0060530 383 LLVDKDK|NP 0.064 . NF0060530 386 DKDKNPK|WN 0.067 . NF0060530 396 PTLDQVK|KK 0.056 . NF0060530 397 TLDQVKK|KE 0.117 . NF0060530 398 LDQVKKK|EI 0.246 . NF0060530 413 FLTTSAK|IT 0.072 . ____________________________^_________________

  • Fasta :-

    >NF0060530 ATGAAAAAAATGCATCGCACCACAAGTCTTTGTTCGAAGGCTTTCAAGTCTTTTTCTTCC AAAATTCAAATTCATACCAATCTCGGAATACAACAACACGTTCGACTCTTCCATTCCAAT CACTTCCAAAGGATGACTTCAACAACCATTGAACCTCAAGTTCTATTTCATGATCGTTCA TCAGAACCATCCGTACAAGTCATCACGTTAAACAGACCCAAAGCCTTGAATTCATTGAAT TTAGAGATGGTTCGGGAACTTACACCACGATACGAACAATTATCATCATCCAATGATCCA TGCAAGATGATCATTTTGAAAGGAACAGGAGACAAGGCTTTCTGTGCTGGTGGTGATATT AAAGCAATTTATGAAAGCAAGGATCCGAAATTCTTTGCAGAAGAATATCAATTGAATTAC CTGATTGGATCTCTCTATGAAAAACACAAGAAGGTTCAAATTGCATTGTTGAATGGTATC ACCATGGGTGGAGGAGTTGGATTGAGCGTTCAACCTGATACAATTAGAGTTGCTACTGAG AAGACTGTTTTTGCAATGCCAGAAACAGCCATTGGTTTCTTTTGTGATGTTGGTGGAAGT TATTTCCTTCCTAGAATTCCAATTAAAGGACTTGGAATGTATTTGGCATTGACAGGAGCA AGATTAAAGGGAGAGCAATGTGTTGTTGCTGGTATTGCAACTCATTTTGTTCCATCTGAC AAGTTGGGAGAATTAGAAGAACTTCTTGTCAAACTCAGTAGAGAACACAATGGATTGCTT TCTCCACAAATTATCGGAAGTGAAATTACAAAGCATTTCCCTCAAGACCAATATCTTAAC ACCTCTCATGCTAAATCATTCTTGCAACATGAAAAGGAAATTTCATTATTTGACCCATCT GTGAACCCAACCGTTCATGACATTATTGAAAGTTTAAAAAAGTTGAACACTCACCATGCT GAGCACACTCTTAAAACATTGGAGCAAATGTCACCAACTAGTTTAAGGGTAGTCCACAGA CAATTAAGGATGGGAGCTGTATTAGGTTATAAGGAATGTTTTGACATGGAGTTGGGCATT GCAAAACACATGATGTTTGGTCATGACTTCTTTGAAGGTGTTAGAGCATTACTTGTTGAC AAGGACAAGAATCCAAAATGGAATCCTCCTACCTTAGACCAGGTCAAGAAAAAAGAGATA GATGCTTACTTTGAAGCATTCCTTACCACCAGTGCCAAGATTACTCAACACAATGAAAAT GCATAA
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  • Fasta :-

    MKKMHRTTSLCSKAFKSFSSKIQIHTNLGIQQHVRLFHSNHFQRMTSTTIEPQVLFHDRS SEPSVQVITLNRPKALNSLNLEMVRELTPRYEQLSSSNDPCKMIILKGTGDKAFCAGGDI KAIYESKDPKFFAEEYQLNYLIGSLYEKHKKVQIALLNGITMGGGVGLSVQPDTIRVATE KTVFAMPETAIGFFCDVGGSYFLPRIPIKGLGMYLALTGARLKGEQCVVAGIATHFVPSD KLGELEELLVKLSREHNGLLSPQIIGSEITKHFPQDQYLNTSHAKSFLQHEKEISLFDPS VNPTVHDIIESLKKLNTHHAEHTLKTLEQMSPTSLRVVHRQLRMGAVLGYKECFDMELGI AKHMMFGHDFFEGVRALLVDKDKNPKWNPPTLDQVKKKEIDAYFEAFLTTSAKITQHNEN A

  • title: substrate binding site
  • coordinates: L76,S78,K112,A116,G117,G118,D119,I120,I160,M162,G163,G164,P187,E188,I191
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
NF006053088 TVRELTPRYE0.994unspNF0060530331 SLEQMSPTSL0.994unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India