NF0074780 | peptidase m20

UniProt_ID:

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	_ID	Prediction	OTHER	SP	mTP	CS_Position
	NF0074780	OTHER	0.999948	0.000029	0.000024

No Results

Fasta :-
>NF0074780 MSDQHLNSEYLQSFVERDFDENILPALKDFIRIPNQSPNFDTHVLTNGYMEQALSLIVHW IEKQNINGLNLEVMRIEGKTPLIFVDIDSTIEGKKGWKKNVPIAFLYGHADKQPPAEGWA DGLSPYIPVVRSRLPSDHGHIADDFTYLYGRGSNDDGYVSISTKMDRVHSFTHCIRPCFL PFLQSRHCKNNECLMEESSFVANSVRNLVLVICPIIYVIFSLLKKVSTLERHWERTHP
Download Fasta

MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NF0074780.fa Sequence name : NF0074780 Sequence length : 238 VALUES OF COMPUTED PARAMETERS Coef20 : 3.323 CoefTot : 0.112 ChDiff : -5 ZoneTo : 2 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.882 2.582 0.460 0.836 MesoH : -0.636 0.419 -0.328 0.165 MuHd_075 : 35.998 23.284 8.157 8.295 MuHd_095 : 8.148 10.237 3.649 3.263 MuHd_100 : 14.047 7.791 2.336 2.644 MuHd_105 : 16.838 8.211 2.368 2.765 Hmax_075 : 10.267 10.733 -0.551 4.550 Hmax_095 : -7.000 2.450 -4.013 1.908 Hmax_100 : -1.800 -0.500 -4.453 0.690 Hmax_105 : -4.375 1.225 -3.777 1.164 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9884 0.0116 DFMC : 0.9902 0.0098

##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 238 NF0074780 MSDQHLNSEYLQSFVERDFDENILPALKDFIRIPNQSPNFDTHVLTNGYMEQALSLIVHWIEKQNINGLNLEVMRIEGKT 80 PLIFVDIDSTIEGKKGWKKNVPIAFLYGHADKQPPAEGWADGLSPYIPVVRSRLPSDHGHIADDFTYLYGRGSNDDGYVS 160 ISTKMDRVHSFTHCIRPCFLPFLQSRHCKNNECLMEESSFVANSVRNLVLVICPIIYVIFSLLKKVSTLERHWERTHP 240 ................................................................................ 80 ................................................................................ 160 .............................................................................. 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NF0074780 17 LQSFVER|DF 0.167 . NF0074780 28 NILPALK|DF 0.062 . NF0074780 32 ALKDFIR|IP 0.085 . NF0074780 63 IVHWIEK|QN 0.071 . NF0074780 75 LNLEVMR|IE 0.091 . NF0074780 79 VMRIEGK|TP 0.056 . NF0074780 94 DSTIEGK|KG 0.057 . NF0074780 95 STIEGKK|GW 0.106 . NF0074780 98 EGKKGWK|KN 0.057 . NF0074780 99 GKKGWKK|NV 0.142 . NF0074780 112 LYGHADK|QP 0.062 . NF0074780 131 PYIPVVR|SR 0.105 . NF0074780 133 IPVVRSR|LP 0.135 . NF0074780 151 FTYLYGR|GS 0.084 . NF0074780 164 YVSISTK|MD 0.068 . NF0074780 167 ISTKMDR|VH 0.073 . NF0074780 176 SFTHCIR|PC 0.078 . NF0074780 186 LPFLQSR|HC 0.098 . NF0074780 189 LQSRHCK|NN 0.197 . NF0074780 206 FVANSVR|NL 0.080 . NF0074780 224 VIFSLLK|KV 0.076 . NF0074780 225 IFSLLKK|VS 0.095 . NF0074780 231 KVSTLER|HW 0.115 . NF0074780 235 LERHWER|TH 0.084 . ____________________________^_________________

Fasta :-
>NF0074780 ATGTCTGATCAACACCTTAATTCCGAATATTTGCAATCGTTTGTGGAGCGTGACTTTGAT GAGAATATACTTCCTGCTTTGAAGGATTTTATTCGAATTCCCAATCAATCTCCGAATTTT GATACTCATGTTTTAACGAATGGTTATATGGAACAAGCCTTGAGTTTGATTGTGCATTGG ATTGAAAAACAAAATATTAATGGATTGAATTTGGAGGTGATGAGAATTGAAGGAAAAACA CCTTTGATCTTTGTGGACATTGATTCCACCATAGAAGGAAAGAAAGGATGGAAAAAGAAT GTTCCGATTGCTTTCTTGTATGGTCATGCTGACAAACAACCGCCAGCAGAAGGATGGGCT GATGGCCTCTCTCCTTACATTCCCGTTGTAAGAAGTCGATTACCCTCCGATCATGGTCAC ATTGCTGACGATTTCACGTATCTGTACGGCAGAGGATCAAACGATGATGGTTATGTAAGT ATTTCAACGAAGATGGACCGAGTGCATTCATTCACACACTGCATCAGGCCGTGTTTTCTT CCATTCTTGCAGTCAAGGCATTGCAAAAACAACGAGTGCCTCATGGAAGAATCATCATTT GTTGCGAATTCAGTGAGGAATCTGGTTCTTGTGATTTGCCCTATTATTTATGTCATATTC TCCCTTTTGAAAAAAGTAAGCACATTAGAGAGACACTGGGAGAGGACGCACCCATAA
Download Fasta

Fasta :-

MSDQHLNSEYLQSFVERDFDENILPALKDFIRIPNQSPNFDTHVLTNGYMEQALSLIVHW IEKQNINGLNLEVMRIEGKTPLIFVDIDSTIEGKKGWKKNVPIAFLYGHADKQPPAEGWA DGLSPYIPVVRSRLPSDHGHIADDFTYLYGRGSNDDGYVSISTKMDRVHSFTHCIRPCFL PFLQSRHCKNNECLMEESSFVANSVRNLVLVICPIIYVIFSLLKKVSTLERHWERTHP

No Results

	ID	Site	Position	Gscore	Iscore
	NF0074780	T	236	0.516	0.028

	ID	Site	Position	Gscore	Iscore
	NF0074780	T	236	0.516	0.028

	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method
	NF0074780	158 Y	NDDGYVSIS	0.991	unsp	NF0074780	158 Y	NDDGYVSIS	0.991	unsp	NF0074780	158 Y	NDDGYVSIS	0.991	unsp	NF0074780	162 S	YVSISTKMD	0.993	unsp	NF0074780	136 S	SRLPSDHGH	0.991	unsp	NF0074780	153 S	YGRGSNDDG	0.993	unsp

NF0074780 | peptidase m20

ID's

UniProt_ID:

GEO Functions

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Subcellular Localization

Targetp

Signalp

Fasta :-

Mitoprot

ProPeptide Prediction

Sequence

Nucleotide sequence

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Protein sequence

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Domains

Structure

Post Translational Modifications

N_Linked Glycosylation

O_Linked Glycosylation

Phosphorylation

Protein-Protein Interaction

String

Literature

PubMed

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Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India