NF0076640 | 26s proteasome non-atpase regulatory subunit 14

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0005515      

  • Computed_GO_Functions:  protein binding      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
NF0076640OTHER0.9956240.0007760.003600
No Results

  • Fasta :-

    >NF0076640 MDPRLQRLLMQQMGGGMPNVGDQPLPDTAETVTISSLALLKMLKHGRAGVPMEVMGLMLG EFIDEYTVRCIDVFAMPQSGTGVSVEAVDPVFQTKMLELLKQTGRPEMVVGWYHSHPGFG CWLSSVDINTQQSFESLTKRSVAVVVDPIQSVKGKVVIDAFRTINPQLAMFGQEPRQSTS VQGHLNKPTIQALIHGLNRHYYSMPISYRKNELEQEMLLHVHKKTWTEGLKLVDFNEHEK ETEKVLKSMVELAKTYNKMIQEEGKTSREQYQLANVGKLDPKRHLESSVEALMGSNVNQT LGMMLNTVIF
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NF0076640.fa Sequence name : NF0076640 Sequence length : 310 VALUES OF COMPUTED PARAMETERS Coef20 : 3.366 CoefTot : -1.707 ChDiff : -2 ZoneTo : 21 KR : 2 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.071 1.329 -0.073 0.513 MesoH : -0.291 0.535 -0.300 0.264 MuHd_075 : 23.957 16.628 7.359 4.932 MuHd_095 : 38.216 26.599 8.849 8.455 MuHd_100 : 32.677 21.445 7.092 7.270 MuHd_105 : 20.927 11.760 3.688 4.902 Hmax_075 : 16.800 12.367 2.144 5.180 Hmax_095 : 13.388 14.000 1.057 4.646 Hmax_100 : 12.500 11.700 0.585 4.210 Hmax_105 : 10.763 9.800 -0.309 3.386 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8871 0.1129 DFMC : 0.9212 0.0788
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 310 NF0076640 MDPRLQRLLMQQMGGGMPNVGDQPLPDTAETVTISSLALLKMLKHGRAGVPMEVMGLMLGEFIDEYTVRCIDVFAMPQSG 80 TGVSVEAVDPVFQTKMLELLKQTGRPEMVVGWYHSHPGFGCWLSSVDINTQQSFESLTKRSVAVVVDPIQSVKGKVVIDA 160 FRTINPQLAMFGQEPRQSTSVQGHLNKPTIQALIHGLNRHYYSMPISYRKNELEQEMLLHVHKKTWTEGLKLVDFNEHEK 240 ETEKVLKSMVELAKTYNKMIQEEGKTSREQYQLANVGKLDPKRHLESSVEALMGSNVNQTLGMMLNTVIF 320 ................................................................................ 80 ...........................................................P.................... 160 ................................................................................ 240 ...................................................................... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ NF0076640 4 ---MDPR|LQ 0.075 . NF0076640 7 MDPRLQR|LL 0.298 . NF0076640 41 SSLALLK|ML 0.069 . NF0076640 44 ALLKMLK|HG 0.067 . NF0076640 47 KMLKHGR|AG 0.102 . NF0076640 69 IDEYTVR|CI 0.099 . NF0076640 95 DPVFQTK|ML 0.073 . NF0076640 101 KMLELLK|QT 0.068 . NF0076640 105 LLKQTGR|PE 0.088 . NF0076640 139 SFESLTK|RS 0.059 . NF0076640 140 FESLTKR|SV 0.522 *ProP* NF0076640 153 DPIQSVK|GK 0.062 . NF0076640 155 IQSVKGK|VV 0.153 . NF0076640 162 VVIDAFR|TI 0.104 . NF0076640 176 MFGQEPR|QS 0.104 . NF0076640 187 VQGHLNK|PT 0.078 . NF0076640 199 LIHGLNR|HY 0.086 . NF0076640 209 SMPISYR|KN 0.100 . NF0076640 210 MPISYRK|NE 0.081 . NF0076640 223 MLLHVHK|KT 0.073 . NF0076640 224 LLHVHKK|TW 0.216 . NF0076640 231 TWTEGLK|LV 0.073 . NF0076640 240 DFNEHEK|ET 0.082 . NF0076640 244 HEKETEK|VL 0.057 . NF0076640 247 ETEKVLK|SM 0.076 . NF0076640 254 SMVELAK|TY 0.068 . NF0076640 258 LAKTYNK|MI 0.076 . NF0076640 265 MIQEEGK|TS 0.067 . NF0076640 268 EEGKTSR|EQ 0.086 . NF0076640 278 QLANVGK|LD 0.062 . NF0076640 282 VGKLDPK|RH 0.054 . NF0076640 283 GKLDPKR|HL 0.210 . ____________________________^_________________

  • Fasta :-

    >NF0076640 ATGGATCCACGTTTACAACGTTTATTAATGCAACAAATGGGAGGTGGTATGCCCAATGTT GGTGATCAGCCTCTTCCCGATACCGCTGAAACCGTAACCATCAGTAGTTTAGCTCTTTTG AAAATGTTAAAGCATGGTCGAGCGGGAGTTCCTATGGAAGTCATGGGTCTCATGCTTGGA GAATTTATTGATGAATATACAGTTCGTTGTATCGATGTCTTTGCCATGCCTCAAAGTGGT ACAGGTGTCAGTGTAGAAGCTGTTGATCCTGTATTTCAAACTAAAATGTTAGAATTATTG AAACAAACGGGTAGACCTGAAATGGTGGTTGGATGGTATCACTCTCACCCTGGGTTTGGA TGTTGGTTGAGTAGTGTAGATATTAATACACAACAATCATTTGAATCTTTAACTAAACGA TCAGTTGCAGTAGTGGTGGATCCAATTCAATCTGTGAAGGGTAAAGTTGTGATTGATGCA TTCCGTACGATTAATCCTCAACTGGCCATGTTTGGTCAAGAACCTCGTCAATCCACAAGT GTACAGGGACATTTGAATAAGCCAACCATTCAAGCTTTAATTCATGGTTTAAATCGTCAC TATTATTCAATGCCAATTTCGTATCGTAAGAATGAATTGGAACAAGAAATGTTATTGCAT GTCCATAAAAAGACTTGGACTGAAGGTCTGAAATTAGTAGATTTTAATGAACACGAGAAA GAGACTGAAAAAGTATTGAAGAGTATGGTTGAATTGGCTAAAACTTATAATAAGATGATT CAAGAGGAAGGAAAGACATCAAGAGAGCAATATCAATTGGCCAATGTGGGTAAATTAGAT CCAAAGAGACACTTGGAGAGTAGTGTTGAAGCATTGATGGGATCTAATGTCAATCAAACC CTCGGTATGATGTTGAACACTGTTATTTTTTAA
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  • Fasta :-

    MDPRLQRLLMQQMGGGMPNVGDQPLPDTAETVTISSLALLKMLKHGRAGVPMEVMGLMLG EFIDEYTVRCIDVFAMPQSGTGVSVEAVDPVFQTKMLELLKQTGRPEMVVGWYHSHPGFG CWLSSVDINTQQSFESLTKRSVAVVVDPIQSVKGKVVIDAFRTINPQLAMFGQEPRQSTS VQGHLNKPTIQALIHGLNRHYYSMPISYRKNELEQEMLLHVHKKTWTEGLKLVDFNEHEK ETEKVLKSMVELAKTYNKMIQEEGKTSREQYQLANVGKLDPKRHLESSVEALMGSNVNQT LGMMLNTVIF

  • title: MPN+ (JAMM) motif
  • coordinates: E53,H114,H116,S124,D127
No Results
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Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India