NF0088780 | phosphatidylcholine-sterol acyltransferase

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0008374      

  • Computed_GO_Functions:  O-acyltransferase activity      

  • Computed_GO_Process_IDs:  GO:0006629      

  • Computed_GO_Processes:  lipid metabolic process      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
NF0088780OTHER0.6394840.3557560.004760
No Results

  • Fasta :-

    >NF0088780 MIQPSPPPSSSLLWFMTQVVVVLMMMLVMIMALFIPTCSTSEIPSNNSIKRIPLASKSTH NNNIQMNHPLITNQRNKKSIFETMGMNPFQIMMLSSSELNSRRDDDLNVLLHIRRQDPDQ NHREDDSQQSISFDTTTLTLRQYKNTKVQKSFKTISKPKLTGYPLILVGGLGGVVLMSKR ENAAEPHWWCHRTTDPFQIWISMEELVPYLTEDCFMHDLSIELKEGENSTIDRKKLLRPL DPNVKIFGKDYGGVESVTHLVKEATSQSGYMIKMINLLVSNGYEIGKSLRAMPYDWRLGV VEWSTRNSTTGGDFYAFQQLIEDTFSRNGNVPVSLLGHSMGGPFVQYFLANYVSQSWKDK YISHFIPFAGAFDGAPIALPLAIAGSNYGVPTFSQTNAKKLTQSFGGPNFMIPVMSQHFD YPIFSYISPNGTRQDYYANPSSIKQLYKEAKMDKTWEIFAHEYTEYENVKFRAPNVSTHC VYGYGVKSLAHLQYSGQKPLSELVLDDILHHSEALKIDDGDGTVPLYSLAICDDFAKQQQ KPVMVHRFFNVTHLTVVTDDKVLQTLLDILHTPIG
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NF0088780.fa Sequence name : NF0088780 Sequence length : 575 VALUES OF COMPUTED PARAMETERS Coef20 : 3.905 CoefTot : -2.808 ChDiff : -3 ZoneTo : 97 KR : 6 DE : 2 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.935 3.265 0.517 0.978 MesoH : 0.277 0.415 -0.248 0.339 MuHd_075 : 37.014 25.231 10.858 8.321 MuHd_095 : 27.210 18.863 8.546 6.214 MuHd_100 : 32.646 20.365 10.668 5.769 MuHd_105 : 35.362 21.039 12.027 6.383 Hmax_075 : 11.433 10.967 2.934 3.092 Hmax_095 : 6.200 11.400 -0.687 3.658 Hmax_100 : 10.800 16.600 1.769 2.830 Hmax_105 : 11.900 12.250 2.203 3.512 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9922 0.0078 DFMC : 0.9532 0.0468
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 575 NF0088780 MIQPSPPPSSSLLWFMTQVVVVLMMMLVMIMALFIPTCSTSEIPSNNSIKRIPLASKSTHNNNIQMNHPLITNQRNKKSI 80 FETMGMNPFQIMMLSSSELNSRRDDDLNVLLHIRRQDPDQNHREDDSQQSISFDTTTLTLRQYKNTKVQKSFKTISKPKL 160 TGYPLILVGGLGGVVLMSKRENAAEPHWWCHRTTDPFQIWISMEELVPYLTEDCFMHDLSIELKEGENSTIDRKKLLRPL 240 DPNVKIFGKDYGGVESVTHLVKEATSQSGYMIKMINLLVSNGYEIGKSLRAMPYDWRLGVVEWSTRNSTTGGDFYAFQQL 320 IEDTFSRNGNVPVSLLGHSMGGPFVQYFLANYVSQSWKDKYISHFIPFAGAFDGAPIALPLAIAGSNYGVPTFSQTNAKK 400 LTQSFGGPNFMIPVMSQHFDYPIFSYISPNGTRQDYYANPSSIKQLYKEAKMDKTWEIFAHEYTEYENVKFRAPNVSTHC 480 VYGYGVKSLAHLQYSGQKPLSELVLDDILHHSEALKIDDGDGTVPLYSLAICDDFAKQQQKPVMVHRFFNVTHLTVVTDD 560 KVLQTLLDILHTPIG 640 .............................................................................P.. 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ............... 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ NF0088780 50 PSNNSIK|RI 0.068 . NF0088780 51 SNNSIKR|IP 0.208 . NF0088780 57 RIPLASK|ST 0.081 . NF0088780 75 PLITNQR|NK 0.092 . NF0088780 77 ITNQRNK|KS 0.069 . NF0088780 78 TNQRNKK|SI 0.597 *ProP* NF0088780 102 SSELNSR|RD 0.078 . NF0088780 103 SELNSRR|DD 0.147 . NF0088780 114 NVLLHIR|RQ 0.075 . NF0088780 115 VLLHIRR|QD 0.109 . NF0088780 123 DPDQNHR|ED 0.089 . NF0088780 141 TTTLTLR|QY 0.073 . NF0088780 144 LTLRQYK|NT 0.112 . NF0088780 147 RQYKNTK|VQ 0.057 . NF0088780 150 KNTKVQK|SF 0.084 . NF0088780 153 KVQKSFK|TI 0.079 . NF0088780 157 SFKTISK|PK 0.064 . NF0088780 159 KTISKPK|LT 0.073 . NF0088780 179 GVVLMSK|RE 0.064 . NF0088780 180 VVLMSKR|EN 0.148 . NF0088780 192 PHWWCHR|TT 0.097 . NF0088780 224 DLSIELK|EG 0.064 . NF0088780 233 ENSTIDR|KK 0.074 . NF0088780 234 NSTIDRK|KL 0.065 . NF0088780 235 STIDRKK|LL 0.111 . NF0088780 238 DRKKLLR|PL 0.110 . NF0088780 245 PLDPNVK|IF 0.060 . NF0088780 249 NVKIFGK|DY 0.101 . NF0088780 262 SVTHLVK|EA 0.062 . NF0088780 273 QSGYMIK|MI 0.068 . NF0088780 287 NGYEIGK|SL 0.081 . NF0088780 290 EIGKSLR|AM 0.072 . NF0088780 297 AMPYDWR|LG 0.065 . NF0088780 306 VVEWSTR|NS 0.093 . NF0088780 327 IEDTFSR|NG 0.070 . NF0088780 358 YVSQSWK|DK 0.086 . NF0088780 360 SQSWKDK|YI 0.125 . NF0088780 399 FSQTNAK|KL 0.084 . NF0088780 400 SQTNAKK|LT 0.086 . NF0088780 433 ISPNGTR|QD 0.087 . NF0088780 444 ANPSSIK|QL 0.066 . NF0088780 448 SIKQLYK|EA 0.069 . NF0088780 451 QLYKEAK|MD 0.075 . NF0088780 454 KEAKMDK|TW 0.070 . NF0088780 470 TEYENVK|FR 0.072 . NF0088780 472 YENVKFR|AP 0.118 . NF0088780 487 VYGYGVK|SL 0.069 . NF0088780 498 LQYSGQK|PL 0.064 . NF0088780 516 HHSEALK|ID 0.068 . NF0088780 537 ICDDFAK|QQ 0.061 . NF0088780 541 FAKQQQK|PV 0.079 . NF0088780 547 KPVMVHR|FF 0.124 . NF0088780 561 TVVTDDK|VL 0.062 . ____________________________^_________________

  • Fasta :-

    >NF0088780 ATGATACAACCCTCTCCGCCACCATCATCATCATTGTTGTGGTTCATGACCCAAGTGGTT GTGGTGTTGATGATGATGTTAGTGATGATCATGGCTCTCTTCATTCCTACATGTAGTACC TCTGAAATTCCTTCAAATAATTCCATCAAAAGGATTCCTTTAGCATCAAAGTCTACACAC AACAACAACATCCAAATGAATCATCCCCTCATCACGAACCAAAGAAATAAGAAATCAATT TTTGAAACCATGGGAATGAATCCTTTTCAGATCATGATGTTATCATCCTCTGAGTTAAAT TCTCGAAGGGATGATGATTTGAATGTCCTCCTCCATATTCGACGACAAGACCCGGATCAG AATCACCGTGAGGATGATTCTCAGCAATCAATCTCTTTTGACACAACAACACTCACCCTA AGGCAATACAAGAACACCAAGGTCCAAAAGTCCTTCAAGACCATTTCTAAACCCAAGCTG ACAGGTTATCCATTAATTCTTGTGGGTGGATTGGGTGGTGTCGTTCTCATGTCTAAACGT GAAAATGCAGCAGAACCTCATTGGTGGTGTCATCGCACGACAGATCCTTTTCAAATTTGG ATTTCGATGGAAGAGTTAGTGCCTTATTTGACTGAGGATTGCTTCATGCATGACCTGTCG ATTGAATTAAAGGAAGGAGAGAATTCAACCATAGATCGAAAAAAGTTACTGAGACCACTT GATCCCAATGTGAAAATATTTGGAAAGGATTATGGTGGTGTGGAAAGTGTCACTCATTTG GTGAAGGAAGCAACTTCTCAAAGTGGATACATGATCAAAATGATTAATTTATTAGTCAGC AATGGATATGAAATTGGAAAATCATTAAGGGCAATGCCTTACGACTGGAGATTGGGAGTC GTAGAATGGAGCACACGAAATAGCACCACTGGAGGAGATTTCTATGCATTTCAACAATTA ATTGAAGATACTTTTTCAAGGAATGGAAATGTACCTGTGTCTCTATTGGGACATTCGATG GGAGGACCTTTTGTTCAATACTTTTTAGCAAATTATGTCTCACAGTCATGGAAAGACAAG TATATTTCACATTTTATTCCTTTTGCAGGAGCTTTTGATGGAGCTCCCATTGCATTGCCA TTGGCTATTGCAGGCTCTAATTATGGAGTTCCAACGTTTTCACAAACAAATGCCAAAAAA TTGACTCAATCCTTTGGTGGTCCAAACTTTATGATTCCAGTCATGTCTCAACATTTTGAT TATCCAATATTTTCTTACATTTCTCCAAATGGTACACGTCAAGATTATTATGCCAATCCA TCAAGTATCAAACAACTCTATAAGGAAGCCAAGATGGATAAAACTTGGGAAATATTTGCA CATGAATATACAGAATATGAAAATGTGAAATTTAGAGCTCCTAATGTTTCCACACATTGT GTGTATGGATATGGAGTGAAATCATTAGCTCATTTACAATATTCAGGACAAAAACCATTA AGTGAACTTGTCTTGGATGACATTTTGCATCATAGCGAGGCACTTAAAATCGATGATGGT GATGGAACAGTTCCTTTATATTCACTTGCCATTTGTGACGATTTTGCAAAGCAGCAACAA AAACCAGTCATGGTTCATCGATTTTTCAATGTGACCCATTTGACAGTGGTCACCGATGAC AAAGTATTACAAACCTTGTTGGATATATTGCATACTCCCATTGGTTGA
  • Download Fasta

  • Fasta :-

    MIQPSPPPSSSLLWFMTQVVVVLMMMLVMIMALFIPTCSTSEIPSNNSIKRIPLASKSTH NNNIQMNHPLITNQRNKKSIFETMGMNPFQIMMLSSSELNSRRDDDLNVLLHIRRQDPDQ NHREDDSQQSISFDTTTLTLRQYKNTKVQKSFKTISKPKLTGYPLILVGGLGGVVLMSKR ENAAEPHWWCHRTTDPFQIWISMEELVPYLTEDCFMHDLSIELKEGENSTIDRKKLLRPL DPNVKIFGKDYGGVESVTHLVKEATSQSGYMIKMINLLVSNGYEIGKSLRAMPYDWRLGV VEWSTRNSTTGGDFYAFQQLIEDTFSRNGNVPVSLLGHSMGGPFVQYFLANYVSQSWKDK YISHFIPFAGAFDGAPIALPLAIAGSNYGVPTFSQTNAKKLTQSFGGPNFMIPVMSQHFD YPIFSYISPNGTRQDYYANPSSIKQLYKEAKMDKTWEIFAHEYTEYENVKFRAPNVSTHC VYGYGVKSLAHLQYSGQKPLSELVLDDILHHSEALKIDDGDGTVPLYSLAICDDFAKQQQ KPVMVHRFFNVTHLTVVTDDKVLQTLLDILHTPIG

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
NF0088780151 SKVQKSFKTI0.991unspNF0088780151 SKVQKSFKTI0.991unspNF0088780151 SKVQKSFKTI0.991unspNF0088780178 SVVLMSKREN0.993unspNF0088780229 SEGENSTIDR0.993unspNF0088780356 SYVSQSWKDK0.996unspNF008878048 SPSNNSIKRI0.993unspNF0088780101 SSELNSRRDD0.997unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India