NF0089010 | duf862 duf1000 domain-containing protein

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_IDPredictionOTHERSPmTPCS_Position
NF0089010OTHER0.9991810.0004610.000358
No Results

  • Fasta :-

    >NF0089010 MLSSTKQQGSASLREENNEDEHLKVYLNVYDLQKSTNVIQHSLGLGSYHSGVQIRNTEYT FSADSGVFSHKPRDIPATFLESIYMGKTDVESLTELNEIINELKKEFKPSEYHPLRKNCN HFSNALCQRLLDGKTIPGWVNRSAGIGSFFSRFLPKSTEKNLIESTEAKQIMDSVKMEKY ENENIYTSLNNVVNMSAIECLNQKKPNIVQNIFDPNDKKYLESDTDEQLIIRIPFKTPVN ITAIILKADNKLKCPREILLFSKTGLIVDFDNAESVDPTQIIEIDPDAALKGVAIPLKIV KFKNVNMLQLFVSNNYGDTSTIINHLNIIGKPVATVDLNKLQQNTPGTTDCSSRSS
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NF0089010.fa Sequence name : NF0089010 Sequence length : 356 VALUES OF COMPUTED PARAMETERS Coef20 : 3.465 CoefTot : 0.295 ChDiff : -4 ZoneTo : 14 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.494 1.359 -0.055 0.458 MesoH : -0.779 0.419 -0.457 0.235 MuHd_075 : 5.290 2.380 2.046 1.354 MuHd_095 : 19.997 10.858 4.761 4.527 MuHd_100 : 17.852 11.822 4.607 4.885 MuHd_105 : 11.446 9.122 3.437 4.030 Hmax_075 : -6.200 -4.500 -4.608 -0.640 Hmax_095 : -1.050 0.525 -2.704 1.374 Hmax_100 : 3.600 4.100 -1.102 2.350 Hmax_105 : -3.300 -1.167 -3.539 0.400 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9561 0.0439 DFMC : 0.9234 0.0766
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 356 NF0089010 MLSSTKQQGSASLREENNEDEHLKVYLNVYDLQKSTNVIQHSLGLGSYHSGVQIRNTEYTFSADSGVFSHKPRDIPATFL 80 ESIYMGKTDVESLTELNEIINELKKEFKPSEYHPLRKNCNHFSNALCQRLLDGKTIPGWVNRSAGIGSFFSRFLPKSTEK 160 NLIESTEAKQIMDSVKMEKYENENIYTSLNNVVNMSAIECLNQKKPNIVQNIFDPNDKKYLESDTDEQLIIRIPFKTPVN 240 ITAIILKADNKLKCPREILLFSKTGLIVDFDNAESVDPTQIIEIDPDAALKGVAIPLKIVKFKNVNMLQLFVSNNYGDTS 320 TIINHLNIIGKPVATVDLNKLQQNTPGTTDCSSRSS 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 .................................... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NF0089010 6 -MLSSTK|QQ 0.060 . NF0089010 14 QGSASLR|EE 0.092 . NF0089010 24 NEDEHLK|VY 0.060 . NF0089010 34 NVYDLQK|ST 0.091 . NF0089010 55 HSGVQIR|NT 0.138 . NF0089010 71 SGVFSHK|PR 0.063 . NF0089010 73 VFSHKPR|DI 0.187 . NF0089010 87 ESIYMGK|TD 0.061 . NF0089010 104 EIINELK|KE 0.054 . NF0089010 105 IINELKK|EF 0.113 . NF0089010 108 ELKKEFK|PS 0.065 . NF0089010 116 SEYHPLR|KN 0.093 . NF0089010 117 EYHPLRK|NC 0.075 . NF0089010 129 SNALCQR|LL 0.101 . NF0089010 134 QRLLDGK|TI 0.061 . NF0089010 142 IPGWVNR|SA 0.377 . NF0089010 152 IGSFFSR|FL 0.138 . NF0089010 156 FSRFLPK|ST 0.128 . NF0089010 160 LPKSTEK|NL 0.066 . NF0089010 169 IESTEAK|QI 0.108 . NF0089010 176 QIMDSVK|ME 0.065 . NF0089010 179 DSVKMEK|YE 0.065 . NF0089010 204 IECLNQK|KP 0.061 . NF0089010 205 ECLNQKK|PN 0.085 . NF0089010 218 IFDPNDK|KY 0.055 . NF0089010 219 FDPNDKK|YL 0.097 . NF0089010 232 DEQLIIR|IP 0.073 . NF0089010 236 IIRIPFK|TP 0.061 . NF0089010 247 ITAIILK|AD 0.059 . NF0089010 251 ILKADNK|LK 0.060 . NF0089010 253 KADNKLK|CP 0.066 . NF0089010 256 NKLKCPR|EI 0.078 . NF0089010 263 EILLFSK|TG 0.055 . NF0089010 291 DPDAALK|GV 0.072 . NF0089010 298 GVAIPLK|IV 0.073 . NF0089010 301 IPLKIVK|FK 0.068 . NF0089010 303 LKIVKFK|NV 0.095 . NF0089010 331 HLNIIGK|PV 0.087 . NF0089010 340 ATVDLNK|LQ 0.057 . NF0089010 354 TTDCSSR|SS 0.148 . ____________________________^_________________

  • Fasta :-

    >NF0089010 ATGCTTTCGTCGACAAAACAACAAGGTTCAGCATCATTACGAGAAGAAAATAACGAGGAC GAACATTTGAAAGTTTATTTGAACGTTTATGATTTACAAAAGAGTACCAACGTGATCCAG CATTCTCTCGGATTGGGTTCCTATCACAGCGGAGTGCAGATCAGAAATACCGAATACACT TTTTCAGCTGACTCTGGTGTATTCAGCCACAAACCAAGGGACATTCCGGCTACATTTTTA GAGTCAATTTATATGGGAAAAACAGATGTGGAATCTCTGACAGAATTGAATGAAATCATC AATGAATTGAAGAAAGAATTTAAACCTTCGGAATACCATCCGTTGAGGAAAAACTGTAAT CATTTTTCGAATGCGCTGTGCCAAAGATTATTGGACGGGAAAACAATTCCTGGATGGGTA AACAGATCTGCTGGTATTGGTTCATTCTTCTCTCGTTTCTTGCCTAAGTCTACCGAGAAA AATTTAATTGAAAGCACGGAAGCAAAGCAGATCATGGATTCTGTAAAAATGGAAAAATAT GAAAATGAAAACATTTACACAAGCTTGAATAATGTTGTAAATATGAGTGCTATTGAATGT TTAAATCAAAAGAAACCTAACATTGTACAAAACATCTTCGACCCTAACGATAAGAAATAT TTAGAGAGTGATACTGATGAACAACTAATCATTAGAATTCCATTCAAAACTCCTGTAAAT ATAACAGCAATTATTTTAAAGGCCGATAACAAGCTCAAATGTCCGAGAGAGATCTTACTA TTTTCCAAGACTGGCTTGATTGTAGATTTTGATAATGCTGAAAGTGTTGATCCAACTCAG ATTATTGAAATTGATCCTGATGCTGCACTCAAAGGTGTTGCAATTCCTCTAAAAATTGTG AAATTCAAGAATGTAAACATGTTGCAACTATTCGTGAGCAATAATTATGGAGACACTTCA ACCATAATTAATCATTTGAATATTATTGGGAAGCCAGTGGCCACAGTGGACTTGAATAAG CTACAACAAAACACACCTGGCACAACTGACTGCAGTTCTCGAAGTTCATGATGTAGTTGA
  • Download Fasta

  • Fasta :-

    MLSSTKQQGSASLREENNEDEHLKVYLNVYDLQKSTNVIQHSLGLGSYHSGVQIRNTEYT FSADSGVFSHKPRDIPATFLESIYMGKTDVESLTELNEIINELKKEFKPSEYHPLRKNCN HFSNALCQRLLDGKTIPGWVNRSAGIGSFFSRFLPKSTEKNLIESTEAKQIMDSVKMEKY ENENIYTSLNNVVNMSAIECLNQKKPNIVQNIFDPNDKKYLESDTDEQLIIRIPFKTPVN ITAIILKADNKLKCPREILLFSKTGLIVDFDNAESVDPTQIIEIDPDAALKGVAIPLKIV KFKNVNMLQLFVSNNYGDTSTIINHLNIIGKPVATVDLNKLQQNTPGTTDCSSRSS

    No Results
IDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscore
NF0089010S3560.5540.012NF0089010S3550.5230.023NF0089010T3490.5110.048
IDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscore
NF0089010S3560.5540.012NF0089010S3550.5230.023NF0089010T3490.5110.048
IDSitePeptideScoreMethod
NF0089010174 SQIMDSVKME0.993unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India